FFCP PHASE1:Hg19::chr10:105428481..105428540,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9644 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23664 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-49bp_to_uc010qqs.1_5end | |||
|coexpression_cluster_id=C2033 | |||
|description=CAGE_peak_5_at_SH3PXD2A_5end | |||
|id=chr10:105428481..105428540,- | |||
|ontology_enrichment_celltype=CL:0000055!7.81e-20!180;CL:0000057!1.46e-16!75;CL:0000187!5.24e-15!54;CL:0000680!7.18e-15!57;CL:0000056!7.18e-15!57;CL:0000355!7.18e-15!57;CL:0000183!1.01e-14!59;CL:0000048!6.07e-14!430;CL:0000723!6.98e-13!436;CL:0000393!2.50e-12!60;CL:0000211!2.50e-12!60;CL:0000192!6.88e-12!42;CL:0000514!6.88e-12!42;CL:0000034!1.03e-11!444;CL:0000222!1.08e-09!119;CL:0000136!2.02e-09!15;CL:0002334!2.60e-09!12;CL:0000359!3.78e-09!32;CL:0002494!3.92e-09!16;CL:0002620!7.61e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.10e-11;12!CL:0002494;4.07e-11;16!CL:0000187;1.93e-10;55!CL:0000192;9.33e-10;43!CL:0000359;1.29e-09;32!CL:0000136;2.97e-09;13!CL:0002620;3.02e-08;23!CL:0000393;6.12e-08;61!CL:0000211;6.12e-08;61!CL:0000134;1.59e-07;55!CL:0000057;6.67e-07;73!CL:0000723;7.22e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.77e-22,427;CL:0000723,4.02e-21,433;CL:0000034,3.87e-20,441;CL:0000057,8.40e-18,76;CL:0000680,5.98e-17,58;CL:0000056,5.98e-17,58;CL:0000355,5.98e-17,58;CL:0000187,7.37e-17,55;CL:0000393,1.18e-13,61;CL:0000211,1.18e-13,61;CL:0000192,3.03e-13,43;CL:0000514,3.03e-13,43;CL:0002334,1.94e-11,12;CL:0002494,3.26e-11,16;CL:0000134,1.03e-10,354;CL:0000136,1.50e-10,15;CL:0000359,3.26e-10,32;CL:0002320,9.25e-10,361;CL:0002620,2.55e-08,23;CL:0000222,5.17e-08,121;CL:0000219,2.23e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;9.33e-10;43!CL:0000355;9.48e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!7.14e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.46e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.52e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!6.63e-19!84;UBERON:0002385!1.41e-15!63;UBERON:0001015!1.41e-15!63;UBERON:0000383!1.41e-15!63;UBERON:0001134!2.44e-15!61;UBERON:0002036!2.44e-15!61;UBERON:0003082!2.44e-15!61;UBERON:0004290!6.55e-14!70;UBERON:0001009!1.92e-12!113;UBERON:0004535!5.53e-12!110;UBERON:0007100!8.18e-12!27;UBERON:0000948!1.35e-11!24;UBERON:0005498!1.35e-11!24;UBERON:0004140!1.35e-11!24;UBERON:0009881!1.35e-11!24;UBERON:0004141!1.35e-11!24;UBERON:0003084!1.35e-11!24;UBERON:0007005!1.35e-11!24;UBERON:0004139!1.35e-11!24;UBERON:0004291!1.35e-11!24;UBERON:0001981!1.90e-11!60;UBERON:0007500!1.90e-11!60;UBERON:0004537!1.90e-11!60;UBERON:0006965!1.90e-11!60;UBERON:0002049!4.99e-11!79;UBERON:0007798!4.99e-11!79;UBERON:0000914!5.35e-11!83;UBERON:0002329!5.35e-11!83;UBERON:0003077!5.35e-11!83;UBERON:0003059!5.35e-11!83;UBERON:0007282!5.35e-11!83;UBERON:0009618!5.35e-11!83;UBERON:0007285!5.35e-11!83;UBERON:0001637!2.09e-10!42;UBERON:0003509!2.09e-10!42;UBERON:0004572!2.09e-10!42;UBERON:0003914!4.00e-10!118;UBERON:0000055!5.24e-10!69;UBERON:0000486!8.27e-10!82;UBERON:0001013!4.21e-09!14;UBERON:0004573!1.95e-08!33;UBERON:0004571!1.95e-08!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;3.35e-13;22!UBERON:0007100;1.03e-12;25!UBERON:0001013;3.04e-11;14!UBERON:0001637;2.20e-09;42!UBERON:0003509;2.20e-09;42!UBERON:0004572;2.20e-09;42!UBERON:0004573;3.07e-09;33!UBERON:0004571;3.07e-09;33!UBERON:0002385;3.28e-08;31!UBERON:0001015;3.28e-08;31!UBERON:0000383;3.28e-08;31!UBERON:0000947;1.18e-07;21!UBERON:0010191;1.18e-07;21!UBERON:0003688;2.78e-07;6!UBERON:0002358;2.78e-07;6!UBERON:0003684;2.78e-07;6!UBERON:0001178;2.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.18e-20,83;UBERON:0001134,3.27e-17,62;UBERON:0002036,3.27e-17,62;UBERON:0003082,3.27e-17,62;UBERON:0002385,6.20e-17,64;UBERON:0001015,6.20e-17,64;UBERON:0000383,6.20e-17,64;UBERON:0000926,1.29e-15,315;UBERON:0004120,1.29e-15,315;UBERON:0006603,1.29e-15,315;UBERON:0002329,5.55e-15,71;UBERON:0003059,5.55e-15,71;UBERON:0007282,5.55e-15,71;UBERON:0004290,5.55e-15,71;UBERON:0009618,5.55e-15,71;UBERON:0007503,7.49e-15,78;UBERON:0003077,1.56e-14,72;UBERON:0007285,1.56e-14,72;UBERON:0000948,2.38e-14,24;UBERON:0005498,2.38e-14,24;UBERON:0004140,2.38e-14,24;UBERON:0009881,2.38e-14,24;UBERON:0004141,2.38e-14,24;UBERON:0003084,2.38e-14,24;UBERON:0007005,2.38e-14,24;UBERON:0004139,2.38e-14,24;UBERON:0004291,2.38e-14,24;UBERON:0007524,4.26e-14,73;UBERON:0007100,9.18e-14,27;UBERON:0001637,7.41e-13,42;UBERON:0003509,7.41e-13,42;UBERON:0004572,7.41e-13,42;UBERON:0003914,1.16e-12,117;UBERON:0000486,1.05e-11,83;UBERON:0001013,3.58e-11,14;UBERON:0007500,4.28e-11,59;UBERON:0001981,4.28e-11,59;UBERON:0004537,4.28e-11,59;UBERON:0006965,4.28e-11,59;UBERON:0001009,4.69e-11,112;UBERON:0004535,6.53e-11,109;UBERON:0004573,2.38e-10,33;UBERON:0004571,2.38e-10,33;UBERON:0005256,4.89e-10,122;UBERON:0002384,6.70e-10,371;UBERON:0000055,2.23e-09,68;UBERON:0002049,1.25e-08,78;UBERON:0007798,1.25e-08,78;UBERON:0000479,4.26e-08,773;UBERON:0000947,1.07e-07,21;UBERON:0010191,1.07e-07,21;UBERON:0000490,1.39e-07,148;UBERON:0003688,2.82e-07,6;UBERON:0002358,2.82e-07,6;UBERON:0003684,2.82e-07,6;UBERON:0001178,2.82e-07,6;UBERON:0003081,4.39e-07,203;UBERON:0002100,5.04e-07,199;UBERON:0004457,8.67e-07,12;UBERON:0000042,8.67e-07,12 | |||
|phase1_expression=69.9461760191643,35.7547874897942,85.2774144780626,49.0359161930339,57.2110200866928,62.8083737352265,25.3299878168311,15.7929968356708,30.0363472429814,5.89761447603621,2.09340350391728,0.436882744260345,1.58260186937072,0,0.331397375727916,2.6893005858071,3.61616716814386,8.03341099426111,3.90346239032406,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0.587200878669695,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0,1.94826728407911,0,0.294605907474837,0,0,0,0,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,14.6284119788377,12.0726154746655,8.56679164351653,0,1.00267582127178,0.144846518960824,2.3858578411533,0.486634870302636,0.283604451492204,0.221729397462564,0.527008714158756,2.03017567021455,0,0,1.29818957461873,0.870648686496336,2.52620124985844,0,0,0,2.98143611050058,2.58070378531837,1.04142150482278,1.13061588384802,1.67799774483962,1.10047216776027,2.08994966536811,0,0,0,0.805658634218294,0,0.24406205754817,0,0,0.625098097988558,0.673588117878509,1.68917220724983,0,0.949265659568129,0.732806975721629,0,0,0,44.7274756525787,6.83804762988731,2.91300197789081,10.8997915884549,7.4480360261655,6.16745360156538,25.6197589751292,11.8400423240237,8.71390899119346,6.7355336034844,8.3365570587864,0.756787138224657,0,0.234321431833797,2.18512053781224,1.1409436430889,2.54062756938062,0.23486899728753,0.323745888736263,0.421352420106746,1.63323337003915,0.368502951935304,0.723280468230358,0,0,7.28129089550421,5.03032699271367,0,0,1.10825646193673,0.877955241761676,0.919463387397059,1.50238058906597,5.67160915800105,27.0878349890182,1.49490172172997,8.68920794754204,24.9075609750054,4.94652140344507,14.1702297025096,5.76962254627928,30.0421871389454,35.0773218580315,20.4471357137733,2.94559675655358,1.45481451136931,12.0703261455649,10.9819787068128,6.10418132317755,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,9.81692416624121,16.462960453256,27.931655163253,0,0,0,0,0,0.857839051492628,0.109750285408626,0,0,0,0,2.07986957055916,0,0,2.58299127318808,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.492434012174795,1.17002132569619,2.0808362720422,0,0,0,0,0,0,3.4486426652716,20.6913819931081,29.2332642912489,19.4561937112898,30.6769113226103,0.190493682876507,0,0,10.2643467613623,0.205654985406647,0,0,1.12131084345361,0.43596006883328,0.36669142910475,54.68193576554,7.15312891703765,4.22651376278,10.9034627799797,6.24044621468197,1.02882949704857,1.41849132023278,1.0656887160644,2.43062589218851,0.542621605391443,2.46972101034231,4.23457039581856,5.33087923113819,5.543663110534,0.602878754119172,3.48613383440118,3.79897366491817,1.2162378064119,0,4.21667878966063,0.239624855491583,0,0,7.38384664004654,1.02738161275192,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0.12269149171914,0,0,0,0.713715955188647,0.473107245101804,1.05427273493442,2.10662269809403,11.3703752027992,3.10419213877515,0.664225598535437,1.47495334833363,1.73767228936166,0.391602314925481,0.343143423810856,0.206768026122887,0,0.106727557803444,0.303127571446259,0,1.20956117331872,142.165773880159,116.784561672216,97.6697128627096,84.9562559565297,89.0370613376064,84.4483086003939,68.2723105646959,8.63574285294871,20.0644749603834,3.85997633264903,9.8658341544888,7.66988497835731,0,0,0,1.60740227430449,3.45973219212762,1.44236856455367,0,0,0,0,0.105551628892876,0,0,0.863663664408557,1.54227252690289,3.79325012561394,2.00675909541941,0,0,0.223874754722178,0.219259876645935,0,0,0,0.325378394664303,1.44257416306811,0.824125183365091,0.577566499444116,0,0,16.068392984416,0.48335359146061,5.85384745035649,8.289198435211,3.03240459465967,1.28904293841928,3.33538396002726,2.98293195956353,3.11612124763581,0,0,0,0,2.32422774648643,5.66662224295152,2.7881490806424,2.7723022215848,8.51689648507235,3.47973196830029,1.11194531462352,2.43312307461385,0.744316738719335,1.58189712359363,6.67205678733387,5.62975140884935,1.28381696410176,3.81843897511124,3.92474320099615,2.87795932133304,3.0199073270966,3.29874726567922,4.65019707618627,1.58510321173008,2.52755073743389,4.8763373908959,1.94970791705028,20.0735278837835,2.32049849393576,1.1312434556297,2.26016233240486,10.4759415273764,0.66343897524122,0,6.94530641120025,0.655894752046633,1.62328301570163,1.239293992399,6.47899885824155,1.43411352204052,1.17898849215745,1.426684205925,2.83808851256478,1.05553817648832,10.8667314676768,1.51789269506286,2.44954304171488,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.28853842595289,0,0,0,0,0,2.27235358192189,0.280797178113459,0,0,0,0,0,0,0,0,1.22896305723383,2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| |||
|short_description=p5@SH3PXD2A | |||
}} |
Revision as of 04:48, 11 January 2014
Short description: | p5@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SH3PXD2A_5end |
Coexpression cluster: | C2033_Preadipocyte_Adipocyte_hepatic_Mesenchymal_Ewing_skeletal_Fibroblast |
Association with transcript: | -49bp_to_uc010qqs.1_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.77e-22 | 427 |
somatic stem cell | 4.02e-21 | 433 |
stem cell | 3.87e-20 | 441 |
fibroblast | 8.40e-18 | 76 |
muscle precursor cell | 5.98e-17 | 58 |
myoblast | 5.98e-17 | 58 |
multi-potent skeletal muscle stem cell | 5.98e-17 | 58 |
muscle cell | 7.37e-17 | 55 |
electrically responsive cell | 1.18e-13 | 61 |
electrically active cell | 1.18e-13 | 61 |
smooth muscle cell | 3.03e-13 | 43 |
smooth muscle myoblast | 3.03e-13 | 43 |
preadipocyte | 1.94e-11 | 12 |
cardiocyte | 3.26e-11 | 16 |
mesenchymal cell | 1.03e-10 | 354 |
fat cell | 1.50e-10 | 15 |
vascular associated smooth muscle cell | 3.26e-10 | 32 |
connective tissue cell | 9.25e-10 | 361 |
skin fibroblast | 2.55e-08 | 23 |
mesodermal cell | 5.17e-08 | 121 |
motile cell | 2.23e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.52e-09 | 14 |