FFCP PHASE1:Hg19::chr20:35233898..35233903,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:35233898..35233903,-
|short_description=p@chr20:35233898..35233903,-
|description=CAGE_peak_at_chr20:35233898..35233903,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:35233898..35233903,- | |||
|coexpression_cluster_id=C1214 | |||
|description=CAGE_peak_at_chr20:35233898..35233903,- | |||
|id=chr20:35233898..35233903,- | |||
|ontology_enrichment_celltype=CL:0000037!9.60e-47!172;CL:0000566!9.60e-47!172;CL:0000988!1.27e-45!182;CL:0000738!1.63e-45!140;CL:0002032!2.89e-44!165;CL:0000837!2.89e-44!165;CL:0002087!1.37e-36!119;CL:0002031!1.67e-35!124;CL:0000763!3.19e-24!112;CL:0000049!3.19e-24!112;CL:0000766!1.94e-23!76;CL:0002057!6.79e-22!42;CL:0000860!1.21e-20!45;CL:0000542!1.68e-18!53;CL:0000051!1.68e-18!53;CL:0000838!4.59e-18!52;CL:0000557!8.71e-18!71;CL:0000839!2.72e-17!70;CL:0002194!2.81e-16!63;CL:0000576!2.81e-16!63;CL:0000040!2.81e-16!63;CL:0000559!2.81e-16!63;CL:0002009!4.03e-16!65;CL:0000134!2.70e-13!358;CL:0000219!6.13e-13!390;CL:0002320!1.68e-12!365;CL:0000945!4.23e-10!24;CL:0000826!4.23e-10!24;CL:0000048!1.04e-07!430;CL:0000084!1.99e-07!25;CL:0000827!1.99e-07!25;CL:0000236!2.11e-07!14;CL:0000723!3.35e-07!436;CL:0000034!3.43e-07!444;CL:0000094!9.06e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-20;33!CL:0002057;1.11e-20;33!CL:0000576;6.44e-17;48!CL:0000473;8.94e-16;39!CL:0000234;8.94e-16;39!CL:0002087;1.55e-15;104!CL:0000766;1.60e-15;69!CL:0000945;1.08e-13;24!CL:0000542;1.95e-13;53!CL:0000738;2.20e-13;136!CL:0000763;3.95e-13;100!CL:0000094;1.64e-12;8!CL:0000236;1.83e-12;13!CL:0002393;1.03e-11;6!CL:0002397;1.03e-11;6!CL:0000988;1.15e-11;177!CL:0000081;1.04e-08;11!CL:0000084;2.71e-08;25!CL:0000623;1.39e-07;3!CL:0000775;2.60e-07;3!CL:0000791;3.06e-07;18!CL:0000789;3.06e-07;18!CL:0002419;3.06e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.81e-61,168;CL:0002032,9.56e-59,161;CL:0000837,9.56e-59,161;CL:0000738,1.49e-58,136;CL:0000988,1.21e-56,177;CL:0002031,3.74e-49,120;CL:0002087,4.33e-46,115;CL:0000766,3.94e-33,72;CL:0000763,2.81e-32,108;CL:0000049,2.81e-32,108;CL:0000860,9.65e-30,42;CL:0002057,9.65e-30,42;CL:0000473,8.99e-27,48;CL:0000234,8.99e-27,48;CL:0000838,2.31e-24,52;CL:0000134,3.80e-24,354;CL:0000557,3.89e-24,67;CL:0000542,9.88e-24,53;CL:0000051,9.88e-24,53;CL:0002320,3.23e-23,361;CL:0000839,4.65e-23,66;CL:0002009,9.66e-22,61;CL:0002194,3.55e-21,59;CL:0000576,3.55e-21,59;CL:0000040,3.55e-21,59;CL:0000559,3.55e-21,59;CL:0000219,5.92e-20,386;CL:0000048,2.05e-17,427;CL:0000723,7.64e-17,433;CL:0000034,4.17e-16,441;CL:0000236,4.49e-14,14;CL:0000945,7.48e-14,24;CL:0000826,7.48e-14,24;CL:0000094,1.52e-12,8;CL:0000081,9.84e-09,11;CL:0000084,5.32e-08,25;CL:0000827,5.32e-08,25;CL:0002393,1.33e-07,9;CL:0002397,1.33e-07,9;CL:0000623,1.38e-07,3;CL:0000825,1.38e-07,3;CL:0000775,3.00e-07,3;CL:0000791,4.15e-07,18;CL:0000789,4.15e-07,18;CL:0002420,4.15e-07,18;CL:0002419,4.15e-07,18;CL:0000790,4.15e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;7.48e-22;42!CL:0000051;1.95e-13;53!CL:0000049;4.94e-09;108!CL:0000790;3.06e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!3.24e-07!51;DOID:0060083!3.24e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.19e-19!102;UBERON:0003061!7.19e-19!102;UBERON:0002371!4.83e-17!80;UBERON:0002193!1.73e-15!112;UBERON:0001474!6.38e-15!86;UBERON:0002405!1.00e-13!115;UBERON:0002384!4.21e-11!375;UBERON:0004765!4.37e-10!101;UBERON:0001434!4.37e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.40e-24,76;UBERON:0002384,5.94e-22,371;UBERON:0001474,9.00e-22,82;UBERON:0002390,2.01e-20,98;UBERON:0003061,2.01e-20,98;UBERON:0002405,3.12e-19,93;UBERON:0004765,6.92e-19,90;UBERON:0002193,1.80e-17,108;UBERON:0001434,5.99e-16,100 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0.313454721478088,0.572471974262113,0.273748850145768,0,2.13957536094264,1.55991119954897,0.787107813136792,3.14691421479123,0.767658796194425,1.70297735647684,0,0.90361775633475,0,0.542270404062111,0.142169232487422,1.46800219667424,1.66198622559563,4.21143339687298,4.34021741431704,0.223915474239924,1.6194683300949,0,0.872389432677388,0.755751887377619,0.970336244751265,1.85943229524548,0.411167888021826,1.85823822537062,4.89077066947656,4.09857130446561,2.12834006899727,0.344745680736619,1.93645405075148,4.06279459783025,1.69418105588344,1.91034305040492,0.898893937780338,1.83650335422542,3.53021929783703,3.19668562899521,2.30895910130701,2.99195486432448,2.55734850319616,2.03146467040009,1.70215567407342,0,2.76373531782418,3.12889751052121,2.82345498116652,2.42159801053347,0.736555271975129,1.89877432464531,1.47878700418359,3.18906449947565,2.93522103711726,0.673971786878971,0.901061357049038,0.964353520182481,0.285012743741249,0.79566670879636,0.547992461293902,1.75996244461323,1.09227722252426,0.889509253863555,1.70692089026603,2.80277190925209,1.72425731986345,0,3.81621501814146,4.55370375287559,2.34894875748376,1.91136614062614,0,0.560508562981536,0.263384084775077,0.393419540227666,2.35806457649499,3.28962398399215,0.83593247695339,0.651844533267181,0,1.94826728407911,0.668462741311041,1.17842362989935,0.664601683750863,0.541607727530031,1.0247305578054,1.30059347559878,1.80881695064044,1.65810010671509,0.289803085735052,0.296573126324121,0.267540828089713,0,0.113309342697566,0.383220493601921,0.68725489096526,0,1.27426165729639,0,0,0.451725357233318,0.383959833463255,2.49861453104692,0.710331756132051,0.821127996921047,2.82249440514625,2.13952156626806,3.04131248153878,0,0.670700859703636,0,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0.715471872916026,0,0.371457501329565,0.39752481473341,0,0,0,0.838998872419812,0.275118041940067,0.626984899610432,0,0,0,0,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0,0,0,0.949265659568129,0,11.8602375692457,11.6334079244498,0,0,0,0,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0.772921620136887,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0.272746120590835,0.286804595389004,0.243947412259191,0,0.116193942869518,0.414644220061482,0,0.36497735907583,1.56449532329816,0,0,0.464367928031979,1.44375896333917,0,0,0.241011029883482,0,0,0,0.539325232640658,0.392442930250692,0.38474715694639,0.738155454624648,0,0,0,1.26755034821831,0,1.18157981336281,2.6487785964879,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,1.71697232418975,0.246217006087397,0.702012795417713,0,0,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0.528290604079356,2.69526550203004,5.47655822984453,5.6809095041871,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0,1.04007436911366,0,1.41849132023278,0,0,1.08524321078289,0.823240336780769,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0.61642896765115,0,2.35378802386407,4.72873824484625,8.19384784466166,9.11235557586213,0,0,1.54657762555539,0.167516265334349,1.91381625495949,2.24702107184155,8.97484377612075,5.38740167466846,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0.82707210449155,3.66714141391649,0.853820462427555,0.303127571446259,0,0.604780586659361,0,0.460385919864187,0,0.128139149255701,0,0.482561763430822,0,0,0,0.0821271560138091,0,0.116210378459959,0.604297247958111,0.40101294060657,0,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,3.08454505380579,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,1.30012049207304,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0,0.929015875628594,0.432807638929335,0.284567373393656,0.159426272728822,1.59663497146253,0,1.05836791361941,0.324621940274555,1.12318871245384,0.912938716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| ||
|short_description=p@chr20:35233898..35233903,- | |||
}} | }} |
Latest revision as of 13:37, 28 July 2015
Short description: | p@chr20:35233898..35233903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35233898..35233903, - |
Coexpression cluster: | C1214_Eosinophils_Natural_CD14_Basophils_Neutrophils_Mast_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.40e-24 | 76 |
connective tissue | 5.94e-22 | 371 |
bone element | 9.00e-22 | 82 |
hematopoietic system | 2.01e-20 | 98 |
blood island | 2.01e-20 | 98 |
immune system | 3.12e-19 | 93 |
skeletal element | 6.92e-19 | 90 |
hemolymphoid system | 1.80e-17 | 108 |
skeletal system | 5.99e-16 | 100 |