FFCP PHASE1:Mm9::chr10:59862497..59862520,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr10:59862497..59862520,+ | |id=chr10:59862497..59862520,+ | ||
|ontology_enrichment_celltype=CL:0002319!8.14e-12!43;CL:0002453!1.96e-11!8;CL:0000221!2.02e-11!44;CL:0000133!2.02e-11!44;CL:0000055!1.33e-10!50;CL:0000117!7.66e-10!23;CL:0000337!7.66e-10!23;CL:0000333!7.53e-09!10;CL:0000095!7.53e-09!10;CL:0000243!7.53e-09!10;CL:0000123!7.53e-09!10;CL:0000125!7.53e-09!10;CL:0000030!7.53e-09!10;CL:0000339!7.53e-09!10;CL:0000128!5.58e-08!6;CL:0000126!5.58e-08!6;CL:0000127!5.58e-08!6;CL:0002612!9.09e-07!3 | |ontology_enrichment_celltype=CL:0002319!8.14e-12!43;CL:0002453!1.96e-11!8;CL:0000221!2.02e-11!44;CL:0000133!2.02e-11!44;CL:0000055!1.33e-10!50;CL:0000117!7.66e-10!23;CL:0000337!7.66e-10!23;CL:0000333!7.53e-09!10;CL:0000095!7.53e-09!10;CL:0000243!7.53e-09!10;CL:0000123!7.53e-09!10;CL:0000125!7.53e-09!10;CL:0000030!7.53e-09!10;CL:0000339!7.53e-09!10;CL:0000128!5.58e-08!6;CL:0000126!5.58e-08!6;CL:0000127!5.58e-08!6;CL:0002612!9.09e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.58e-28,8;CL:0002612,4.66e-27,3;CL:0000333,3.00e-22,10;CL:0000095,3.00e-22,10;CL:0000243,3.00e-22,10;CL:0000123,3.00e-22,10;CL:0000125,3.00e-22,10;CL:0000030,3.00e-22,10;CL:0000339,3.00e-22,10;CL:0000878,3.08e-19,2;CL:0000129,3.08e-19,2;CL:0002319,3.81e-16,43;CL:0000221,9.07e-16,44;CL:0000133,9.07e-16,44;CL:0000128,1.11e-13,6;CL:0000126,1.11e-13,6;CL:0000127,1.11e-13,6;CL:0002194,4.16e-10,4;CL:0000766,4.16e-10,4;CL:0000234,4.16e-10,4;CL:0000576,4.16e-10,4;CL:0000235,4.16e-10,4;CL:0000864,4.16e-10,4;CL:0002009,4.16e-10,4;CL:0000040,4.16e-10,4;CL:0000559,4.16e-10,4;CL:0002321,9.80e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.48e-15!73;UBERON:0005743!1.48e-15!73;UBERON:0000073!6.51e-15!75;UBERON:0001016!6.51e-15!75;UBERON:0001049!4.02e-12!52;UBERON:0005068!4.02e-12!52;UBERON:0006241!4.02e-12!52;UBERON:0007135!4.02e-12!52;UBERON:0002020!3.95e-11!34;UBERON:0004121!1.33e-09!102;UBERON:0000924!1.33e-09!102;UBERON:0006601!1.33e-09!102;UBERON:0001948!1.38e-09!5;UBERON:0002315!1.38e-09!5;UBERON:0002616!8.80e-09!49;UBERON:0000955!1.66e-08!50;UBERON:0006238!1.66e-08!50;UBERON:0002240!7.01e-08!6;UBERON:0005174!7.01e-08!6;UBERON:0001137!7.01e-08!6;UBERON:0002780!1.56e-07!39;UBERON:0001890!1.56e-07!39;UBERON:0006240!1.56e-07!39;UBERON:0002346!2.92e-07!71;UBERON:0003075!2.92e-07!71;UBERON:0007284!2.92e-07!71;UBERON:0003080!3.01e-07!40;UBERON:0002257!9.09e-07!3 | |ontology_enrichment_uberon=UBERON:0001017!1.48e-15!73;UBERON:0005743!1.48e-15!73;UBERON:0000073!6.51e-15!75;UBERON:0001016!6.51e-15!75;UBERON:0001049!4.02e-12!52;UBERON:0005068!4.02e-12!52;UBERON:0006241!4.02e-12!52;UBERON:0007135!4.02e-12!52;UBERON:0002020!3.95e-11!34;UBERON:0004121!1.33e-09!102;UBERON:0000924!1.33e-09!102;UBERON:0006601!1.33e-09!102;UBERON:0001948!1.38e-09!5;UBERON:0002315!1.38e-09!5;UBERON:0002616!8.80e-09!49;UBERON:0000955!1.66e-08!50;UBERON:0006238!1.66e-08!50;UBERON:0002240!7.01e-08!6;UBERON:0005174!7.01e-08!6;UBERON:0001137!7.01e-08!6;UBERON:0002780!1.56e-07!39;UBERON:0001890!1.56e-07!39;UBERON:0006240!1.56e-07!39;UBERON:0002346!2.92e-07!71;UBERON:0003075!2.92e-07!71;UBERON:0007284!2.92e-07!71;UBERON:0003080!3.01e-07!40;UBERON:0002257!9.09e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002257,4.66e-27,3;UBERON:0001948,1.54e-16,5;UBERON:0002315,1.54e-16,5;UBERON:0002240,6.75e-14,6;UBERON:0005174,6.75e-14,6;UBERON:0001137,6.75e-14,6;UBERON:0003076,5.00e-12,12;UBERON:0003057,5.00e-12,12;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,1.09012578190223,0.439372365468944,0.972149495371417,1.1198913730029,2.87505128729943,0,0,0,0,0,0.515672092277442,0.202316460859598,1.05798195854407,0,0,0,0,0,0,9.88680364710736,27.2794996778304,0,0,0,0.285650984403804,0.662605622854841,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.659431438650969,0.731901148819277,0,0,0,0.916789486660861,1.47314292736834,2.27794689278565,2.60959224155421,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,0.502617408451458,0.173824320192276,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,1.09012578190223,0.439372365468944,0.972149495371417,1.1198913730029,2.87505128729943,0,0,0,0,0,0.515672092277442,0.202316460859598,1.05798195854407,0,0,0,0,0,0,9.88680364710736,27.2794996778304,0,0,0,0.285650984403804,0.662605622854841,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.659431438650969,0.731901148819277,0,0,0,0.916789486660861,1.47314292736834,2.27794689278565,2.60959224155421,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,0.502617408451458,0.173824320192276,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.187283014939765,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p2@Gm17455 | |short_description=p2@Gm17455 | ||
}} | }} |
Revision as of 18:47, 14 November 2012
Short description: | p2@Gm17455 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm17455_5end |
Coexpression cluster: | MCL_coexpression_mm9:204 |
Association with transcript: | 23bp_to_ENSMUST00000164428, NM_001164374, uc011xej.1_5end |
EntrezGene: | Gm17455 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.58e-28 | 8 |
neuron of the ventral spinal cord | 4.66e-27 | 3 |
migratory neural crest cell | 3.00e-22 | 10 |
neuron associated cell | 3.00e-22 | 10 |
glial cell (sensu Vertebrata) | 3.00e-22 | 10 |
neuron associated cell (sensu Vertebrata) | 3.00e-22 | 10 |
glial cell | 3.00e-22 | 10 |
glioblast | 3.00e-22 | 10 |
glioblast (sensu Vertebrata) | 3.00e-22 | 10 |
central nervous system macrophage | 3.08e-19 | 2 |
microglial cell | 3.08e-19 | 2 |
neural cell | 3.81e-16 | 43 |
ectodermal cell | 9.07e-16 | 44 |
neurectodermal cell | 9.07e-16 | 44 |
oligodendrocyte | 1.11e-13 | 6 |
macroglial cell | 1.11e-13 | 6 |
astrocyte | 1.11e-13 | 6 |
monopoietic cell | 4.16e-10 | 4 |
myeloid leukocyte | 4.16e-10 | 4 |
phagocyte | 4.16e-10 | 4 |
monocyte | 4.16e-10 | 4 |
macrophage | 4.16e-10 | 4 |
tissue-resident macrophage | 4.16e-10 | 4 |
macrophage dendritic cell progenitor | 4.16e-10 | 4 |
monoblast | 4.16e-10 | 4 |
promonocyte | 4.16e-10 | 4 |
embryonic cell | 9.80e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
ventral horn of spinal cord | 4.66e-27 | 3 |
regional part of spinal cord | 1.54e-16 | 5 |
gray matter of spinal cord | 1.54e-16 | 5 |
spinal cord | 6.75e-14 | 6 |
dorsal region element | 6.75e-14 | 6 |
dorsum | 6.75e-14 | 6 |
posterior neural tube | 5.00e-12 | 12 |
chordal neural plate | 5.00e-12 | 12 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.