FFCP PHASE2:Hg19::chr2:45168834..45168847,+
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Short description: | p2@SIX3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIX3_5end |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | -54bp_to_ENST00000260653_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | O95343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SIX3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic stem cell | 2.16e-13 | 5 |
columnar/cuboidal epithelial cell | 1.23e-10 | 27 |
ciliated cell | 5.00e-10 | 3 |
ciliated epithelial cell | 5.00e-10 | 3 |
multi-ciliated epithelial cell | 5.00e-10 | 3 |
non-pigmented ciliary epithelial cell | 5.00e-10 | 3 |
retinal pigment epithelial cell | 5.79e-10 | 3 |
pigment cell | 3.06e-09 | 14 |
neurectodermal cell | 1.22e-08 | 59 |
neurecto-epithelial cell | 8.36e-08 | 20 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 3.46e-31 | 61 |
pigment epithelium of eye | 3.04e-26 | 11 |
eye | 9.76e-22 | 21 |
visual system | 9.76e-22 | 21 |
neural plate | 3.20e-21 | 82 |
presumptive neural plate | 3.20e-21 | 82 |
neurectoderm | 7.09e-20 | 86 |
camera-type eye | 2.01e-19 | 20 |
simple eye | 2.01e-19 | 20 |
immature eye | 2.01e-19 | 20 |
Showing 1 to 10 of 85 entries