FF:11360-117I1: Difference between revisions

Revision as of 17:39, 29 June 2012

Name:	Smooth Muscle Cells - Aortic, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	aorta
dev stage	40 years old adult
sex	male
age	40
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1347
catalog number	CA354-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.207
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.221
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.185
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.042
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.426
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.441
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.185
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.26
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.117
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.185
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.0089
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.315
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.406
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.801
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.185
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.185
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11305

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.14
MA0003.1	MA0003.1	0.195
MA0004.1	MA0004.1	0.85
MA0006.1	MA0006.1	0.266
MA0007.1	MA0007.1	0.368
MA0009.1	MA0009.1	0.695
MA0014.1	MA0014.1	0.872
MA0017.1	MA0017.1	0.329
MA0018.2	MA0018.2	0.00104
MA0019.1	MA0019.1	0.453
MA0024.1	MA0024.1	3.14441e-5
MA0025.1	MA0025.1	0.376
MA0027.1	MA0027.1	0.751
MA0028.1	MA0028.1	0.685
MA0029.1	MA0029.1	0.265
MA0030.1	MA0030.1	0.208
MA0031.1	MA0031.1	0.0343
MA0035.2	MA0035.2	0.227
MA0038.1	MA0038.1	0.225
MA0039.2	MA0039.2	0.385
MA0040.1	MA0040.1	0.507
MA0041.1	MA0041.1	0.442
MA0042.1	MA0042.1	0.915
MA0043.1	MA0043.1	0.0016
MA0046.1	MA0046.1	0.353
MA0047.2	MA0047.2	0.978
MA0048.1	MA0048.1	0.913
MA0050.1	MA0050.1	6.66787e-5
MA0051.1	MA0051.1	0.172
MA0052.1	MA0052.1	0.931
MA0055.1	MA0055.1	0.417
MA0057.1	MA0057.1	0.11
MA0058.1	MA0058.1	0.95
MA0059.1	MA0059.1	0.0817
MA0060.1	MA0060.1	0.0516
MA0061.1	MA0061.1	0.376
MA0062.2	MA0062.2	0.402
MA0065.2	MA0065.2	0.232
MA0066.1	MA0066.1	0.307
MA0067.1	MA0067.1	0.0161
MA0068.1	MA0068.1	0.159
MA0069.1	MA0069.1	0.586
MA0070.1	MA0070.1	0.721
MA0071.1	MA0071.1	0.722
MA0072.1	MA0072.1	0.495
MA0073.1	MA0073.1	0.472
MA0074.1	MA0074.1	0.507
MA0076.1	MA0076.1	0.466
MA0077.1	MA0077.1	0.145
MA0078.1	MA0078.1	0.194
MA0079.2	MA0079.2	0.764
MA0080.2	MA0080.2	0.154
MA0081.1	MA0081.1	0.725
MA0083.1	MA0083.1	1.00625e-4
MA0084.1	MA0084.1	0.577
MA0087.1	MA0087.1	0.571
MA0088.1	MA0088.1	0.466
MA0090.1	MA0090.1	0.0102
MA0091.1	MA0091.1	0.0446
MA0092.1	MA0092.1	0.0584
MA0093.1	MA0093.1	0.822
MA0099.2	MA0099.2	1.56659e-17
MA0100.1	MA0100.1	0.155
MA0101.1	MA0101.1	0.755
MA0102.2	MA0102.2	0.00615
MA0103.1	MA0103.1	0.422
MA0104.2	MA0104.2	0.722
MA0105.1	MA0105.1	0.282
MA0106.1	MA0106.1	0.126
MA0107.1	MA0107.1	0.456
MA0108.2	MA0108.2	7.41789e-7
MA0111.1	MA0111.1	0.0521
MA0112.2	MA0112.2	0.00455
MA0113.1	MA0113.1	0.195
MA0114.1	MA0114.1	0.383
MA0115.1	MA0115.1	0.943
MA0116.1	MA0116.1	0.13
MA0117.1	MA0117.1	0.402
MA0119.1	MA0119.1	0.055
MA0122.1	MA0122.1	0.63
MA0124.1	MA0124.1	0.502
MA0125.1	MA0125.1	0.704
MA0131.1	MA0131.1	0.311
MA0135.1	MA0135.1	0.954
MA0136.1	MA0136.1	0.465
MA0137.2	MA0137.2	0.353
MA0138.2	MA0138.2	0.872
MA0139.1	MA0139.1	0.751
MA0140.1	MA0140.1	0.111
MA0141.1	MA0141.1	0.538
MA0142.1	MA0142.1	0.55
MA0143.1	MA0143.1	0.777
MA0144.1	MA0144.1	0.577
MA0145.1	MA0145.1	0.0803
MA0146.1	MA0146.1	0.158
MA0147.1	MA0147.1	0.751
MA0148.1	MA0148.1	0.62
MA0149.1	MA0149.1	0.404
MA0150.1	MA0150.1	0.0204
MA0152.1	MA0152.1	0.474
MA0153.1	MA0153.1	0.595
MA0154.1	MA0154.1	0.125
MA0155.1	MA0155.1	0.0975
MA0156.1	MA0156.1	0.731
MA0157.1	MA0157.1	0.391
MA0159.1	MA0159.1	0.0771
MA0160.1	MA0160.1	0.562
MA0162.1	MA0162.1	0.069
MA0163.1	MA0163.1	0.036
MA0164.1	MA0164.1	0.565
MA0258.1	MA0258.1	0.122
MA0259.1	MA0259.1	0.989

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11305

Novel motif	Logo	P-value
1	1	0.426
10	10	0.4
100	100	0.938
101	101	0.993
102	102	0.983
103	103	0.517
104	104	0.256
105	105	0.193
106	106	0.025
107	107	0.0319
108	108	0.477
109	109	0.0612
11	11	0.0939
110	110	0.333
111	111	0.502
112	112	0.38
113	113	0.302
114	114	0.141
115	115	0.97
116	116	0.148
117	117	0.963
118	118	0.931
119	119	0.175
12	12	0.627
120	120	0.202
121	121	0.685
122	122	0.531
123	123	0.0776
124	124	0.71
125	125	0.928
126	126	0.7
127	127	0.184
128	128	0.146
129	129	0.815
13	13	0.612
130	130	0.164
131	131	0.257
132	132	0.935
133	133	0.568
134	134	0.151
135	135	0.152
136	136	0.585
137	137	0.774
138	138	0.826
139	139	0.519
14	14	0.999
140	140	0.599
141	141	0.387
142	142	0.96
143	143	0.0082
144	144	0.79
145	145	0.117
146	146	0.433
147	147	0.0977
148	148	0.44
149	149	0.1
15	15	0.376
150	150	0.204
151	151	0.291
152	152	0.0253
153	153	0.883
154	154	0.489
155	155	0.0406
156	156	0.929
157	157	0.795
158	158	0.169
159	159	0.527
16	16	0.268
160	160	0.0705
161	161	0.444
162	162	0.923
163	163	1
164	164	0.692
165	165	0.64
166	166	0.441
167	167	0.821
168	168	0.297
169	169	0.0452
17	17	0.0517
18	18	0.0472
19	19	0.0911
2	2	0.406
20	20	0.315
21	21	0.575
22	22	0.137
23	23	0.136
24	24	0.157
25	25	0.498
26	26	0.193
27	27	0.452
28	28	0.293
29	29	0.519
3	3	0.459
30	30	0.164
31	31	0.547
32	32	0.0344
33	33	0.938
34	34	0.347
35	35	0.694
36	36	0.799
37	37	0.131
38	38	0.37
39	39	0.312
4	4	0.458
40	40	0.145
41	41	0.319
42	42	0.519
43	43	0.257
44	44	0.937
45	45	0.191
46	46	0.138
47	47	0.454
48	48	0.166
49	49	0.396
5	5	0.663
50	50	0.411
51	51	0.865
52	52	0.312
53	53	0.833
54	54	0.531
55	55	0.134
56	56	0.423
57	57	0.376
58	58	0.893
59	59	0.103
6	6	0.756
60	60	0.351
61	61	0.846
62	62	0.951
63	63	0.158
64	64	0.287
65	65	0.117
66	66	0.365
67	67	0.695
68	68	0.163
69	69	0.376
7	7	0.808
70	70	0.0436
71	71	0.177
72	72	0.667
73	73	0.00854
74	74	0.905
75	75	0.538
76	76	0.82
77	77	0.0164
78	78	0.722
79	79	0.3
8	8	0.0358
80	80	0.221
81	81	0.354
82	82	0.385
83	83	0.524
84	84	0.885
85	85	0.146
86	86	0.836
87	87	0.08
88	88	0.0903
89	89	0.0262
9	9	0.256
90	90	0.878
91	91	0.189
92	92	0.535
93	93	0.685
94	94	0.438
95	95	0.299
96	96	0.797
97	97	0.16
98	98	0.729
99	99	0.0167

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11305

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000168 human aortic smooth muscle cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000055 (non-terminally differentiated cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0000680 (muscle precursor cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000056 (myoblast)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0000222 (mesodermal cell)
0002539 (aortic smooth muscle cell)
0000355 (multi-potent skeletal muscle stem cell)
0000514 (smooth muscle myoblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001134 (skeletal muscle tissue)
0001135 (smooth muscle tissue)
0000947 (aorta)
0001637 (artery)
0002100 (trunk)
0000483 (epithelium)
0000926 (mesoderm)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000025 (tube)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0003914 (epithelial tube)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0005291 (embryonic tissue)
0003509 (arterial blood vessel)
0004573 (systemic artery)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0001981 (blood vessel)
0002049 (vasculature)
0000486 (multilaminar epithelium)
0007500 (epithelial tube open at both ends)
0003104 (mesenchyme)
0004237 (blood vessel smooth muscle)
0004695 (arterial system smooth muscle)
0005256 (trunk mesenchyme)
0006598 (presumptive structure)
0002111 (artery smooth muscle tissue)
0007798 (vascular system)
0001015 (musculature)
0002532 (epiblast (generic))
0004178 (aorta smooth muscle tissue)
0002329 (somite)
0002204 (musculoskeletal system)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0010191 (aortic system)
0000383 (musculature of body)
0004572 (arterial system)
0004537 (blood vasculature)
0003077 (paraxial mesoderm)
0004290 (dermomyotome)
0009142 (entire embryonic mesenchyme)
0003081 (lateral plate mesoderm)
0001009 (circulatory system)
0006603 (presumptive mesoderm)
0003082 (myotome)
0004872 (splanchnic layer of lateral plate mesoderm)
0006965 (vascular cord)
0003059 (presomitic mesoderm)
0007282 (presumptive segmental plate)
0009618 (trunk paraxial mesoderm)
0007285 (presumptive paraxial mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.81!63.34!SOX17;;chr11:65686802..65686818,+!p6@DRAP1!1.51!53.23!DRAP1;;chr21:38071430..38071456,+!p1@SIM2!1.50!30.34!SIM2;;chr11:46299199..46299233,+!p1@CREB3L1!1.45!136.27!CREB3L1;;chr20:30433396..30433414,-!p1@FOXS1!1.36!21.82!FOXS1;;chr11:46299539..46299620,+!p2@CREB3L1!1.34!35.13!CREB3L1;;chr11:65686732..65686756,+!p2@DRAP1!1.32!81.44!DRAP1;;chr11:65687362..65687436,+!p3@DRAP1!1.31!87.30!DRAP1;;chr16:86600426..86600441,+!p1@FOXC2!1.31!47.38!FOXC2;;chr6:134210243..134210257,+!p1@TCF21!1.28!18.10!TCF21;;chr2:19558373..19558392,-!p1@OSR1!1.26!46.84!OSR1;;chr6:34204921..34204939,+!p3@HMGA1!1.23!474.82!HMGA1;;chr18:19749541..19749557,+!p1@GATA6!1.18!44.18!GATA6;;chr7:1577899..1577943,+!p3@MAFK!1.17!13.84!MAFK;;chr4:174450089..174450153,-!p2@HAND2!1.16!13.31!HAND2;;chr16:86600870..86600921,+!p2@FOXC2!1.14!12.78!FOXC2;;chr1:170633058..170633084,+!p5@PRRX1!1.12!12.24!PRRX1;;chr8:11561684..11561751,+!p1@GATA4!1.07!10.65!GATA4;;chr15:67418177..67418204,+!p9@SMAD3!1.05!10.11!SMAD3;;chr16:86544113..86544145,+!p1@FOXF1!1.02!11.71!FOXF1;;chr9:35732647..35732678,+!p2@CREB3!1.00!51.10!CREB3;;chr15:67418047..67418093,+!p4@SMAD3!0.99!11.18!SMAD3;;chr11:34642612..34642646,+!p1@EHF!0.98!8.52!EHF;;chr12:124873357..124873401,-!p1@NCOR2!0.95!95.28!NCOR2;;chr5:72744594..72744609,-!p1@FOXD1!0.95!37.26!FOXD1;;chr2:239756739..239756755,+!p2@TWIST2!0.95!13.84!TWIST2;;chr18:19749386..19749404,+!p2@GATA6!0.92!10.65!GATA6;;chr1:170633348..170633399,+!p2@PRRX1!0.92!10.11!PRRX1;;chr11:65667884..65667895,-!p2@FOSL1!0.90!28.21!FOSL1;;chr11:65687243..65687276,+!p8@DRAP1!0.90!9.58!DRAP1;;chr11:65687222..65687240,+!p7@DRAP1!0.90!9.05!DRAP1;;chr4:174451370..174451387,-!p1@HAND2!0.90!6.92!HAND2;;chr11:65687158..65687216,+!p4@DRAP1!0.89!40.99!DRAP1;;chr5:72744445..72744466,-!p2@FOXD1!0.88!11.18!FOXD1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.87!482.27!TAX1BP3;;chr2:239756671..239756732,+!p1@TWIST2!0.87!21.82!TWIST2;;chr7:150945865..150945896,-!p4@SMARCD3!0.87!6.39!SMARCD3;;chr19:47523058..47523114,+!p1@NPAS1!0.87!6.39!NPAS1;;chr11:65667846..65667868,-!p1@FOSL1!0.86!174.60!FOSL1;;chr11:65686776..65686787,+!p9@DRAP1!0.86!7.45!DRAP1;;chr5:72743793..72743855,-!p4@FOXD1!0.86!7.45!FOXD1;;chr15:67430351..67430366,+!p10@SMAD3!0.84!5.86!SMAD3;;chr15:67418119..67418162,+!p5@SMAD3!0.83!6.39!SMAD3;;chr12:66218836..66218888,+!p1@HMGA2!0.82!56.42!HMGA2;;chr1:170633262..170633285,+!p3@PRRX1!0.81!6.39!PRRX1;;chr20:6748325..6748352,+!p1@BMP2!0.80!7.98!BMP2;;chr12:66218904..66218913,+!p11@HMGA2!0.80!5.32!HMGA2;;chr1:37940170..37940190,+!p1@ZC3H12A!0.78!68.14!ZC3H12A;;chr19:42636586..42636607,-!p1@POU2F2!0.78!14.90!POU2F2;;chr12:125002827..125002855,-!p5@NCOR2!0.78!7.45!NCOR2;;chr22:38598086..38598105,+!p1@MAFF!0.76!55.36!MAFF;;chr9:35732514..35732530,+!p5@CREB3!0.76!6.92!CREB3;;chr11:46299186..46299195,+!p3@CREB3L1!0.76!5.32!CREB3L1;;chr17:46622440..46622477,-!p5@HOXB2!0.76!5.32!HOXB2;;chr1:170632285..170632309,+!p1@PRRX1!0.75!5.32!PRRX1;;chr1:151032860..151032918,+!p1@MLLT11!0.74!59.62!MLLT11;;chr11:65686952..65686975,+!p5@DRAP1!0.74!27.68!DRAP1;;chr10:94449703..94449718,+!p1@HHEX!0.74!19.16!HHEX;;chr15:96876966..96877017,+!p12@NR2F2!0.72!6.39!NR2F2;;chr11:32457075..32457095,-!p1@WT1!0.72!4.26!WT1;;chr8:72755987..72756002,-!p7@MSC!0.72!4.26!MSC;;chr2:85981107..85981120,+!p3@ATOH8!0.72!4.26!ATOH8;;chr6:34204973..34204990,+!p4@HMGA1!0.71!61.75!HMGA1;;chr9:35732592..35732640,+!p1@CREB3!0.71!61.22!CREB3;;chr8:106330656..106330684,+!p1@ZFPM2!0.71!11.71!ZFPM2;;chr12:53614115..53614154,-!p1@RARG!0.69!23.42!RARG;;chr6:34205372..34205412,+!p5@HMGA1!0.69!22.36!HMGA1;;chr15:96869292..96869320,+!p15@NR2F2!0.69!5.86!NR2F2;;chr5:321810..321877,+!p1@AHRR!0.68!13.31!AHRR;;chr12:66218255..66218304,+!p3@HMGA2!0.68!11.18!HMGA2;;chr3:52001448..52001478,-!p2@PCBP4!0.67!59.62!PCBP4;;chr12:66218598..66218645,+!p2@HMGA2!0.67!19.16!HMGA2;;chr8:72756637..72756664,-!p3@MSC!0.67!4.26!MSC;;chr7:35293685..35293718,-!p1@TBX20!0.67!3.73!TBX20;;chr10:131762504..131762555,-!p1@EBF3!0.67!3.73!EBF3;;chr11:46299443..46299459,+!p4@CREB3L1!0.67!3.73!CREB3L1;;chr16:31076332..31076388,-!p3@ZNF668!0.67!3.73!ZNF668;;chr16:86600458..86600461,+!p3@FOXC2!0.67!3.73!FOXC2;;chr1:170633100..170633112,+!p19@PRRX1!0.67!3.73!PRRX1;;chr3:52001426..52001447,-!p3@PCBP4!0.66!11.18!PCBP4;;chr17:46622205..46622218,-!p3@HOXB2!0.66!4.26!HOXB2;;chr12:7079780..7079791,-!p2@PHB2!0.65!20.76!PHB2;;chr17:59477233..59477263,+!p1@TBX2!0.64!11.71!TBX2;;chr8:72756267..72756296,-!p4@MSC!0.64!5.32!MSC;;chr1:170632959..170632987,+!p4@PRRX1!0.64!3.73!PRRX1;;chr17:46621937..46621966,-!p2@HOXB2!0.63!10.11!HOXB2;;chr2:71127699..71127744,+!p1@VAX2!0.63!7.45!VAX2;;chr12:124873852..124873881,-!p3@NCOR2!0.62!22.36!NCOR2;;chr15:96869255..96869291,+!p6@NR2F2!0.62!6.39!NR2F2;;chr20:50721803..50721857,-!p2@ZFP64!0.62!5.32!ZFP64;;chr2:231084820..231084836,-!p5@SP110!0.62!3.73!SP110;;chr6:126070769..126070801,+!p1@HEY2!0.62!3.73!HEY2;;chr2:85981027..85981047,+!p8@ATOH8!0.62!3.19!ATOH8;;chr12:66218923..66218934,+!p14@HMGA2!0.62!3.19!HMGA2;;chr6:34204672..34204692,+!p1@HMGA1!0.61!417.86!HMGA1;;chr4:81118647..81118666,+!p1@PRDM8!0.61!4.26!PRDM8;;chr4:81105027..81105039,+!p3@PRDM8!0.61!3.73!PRDM8;;chr17:46622229..46622257,-!p6@HOXB2!0.61!3.73!HOXB2;;chr10:8095593..8095625,+!p3@GATA3!0.61!3.73!GATA3;;chr10:8096772..8096787,+!p2@GATA3!0.61!3.73!GATA3;;chr17:1959369..1959388,+!p2@HIC1!0.60!9.05!HIC1;;chr3:52001396..52001425,-!p4@PCBP4!0.60!5.86!PCBP4;;chr19:13134772..13134822,+!p2@NFIX!0.60!4.79!NFIX;;chr1:151032922..151032951,+!p2@MLLT11!0.59!5.32!MLLT11;;chr15:96869114..96869160,+!p11@NR2F2!0.59!4.26!NR2F2;;chr6:10415276..10415341,-!p2@TFAP2A!0.59!3.73!TFAP2A;;chr3:157823517..157823562,-!p1@SHOX2!0.59!3.19!SHOX2;;chr4:2263809..2263854,-!p1@MXD4!0.58!134.14!MXD4;;chr7:150946015..150946070,-!p3@SMARCD3!0.58!6.92!SMARCD3;;chr7:44143925..44143970,+!p1@AEBP1!0.57!75.59!AEBP1;;chr12:57504975..57505019,-!p2@STAT6!0.57!13.31!STAT6;;chr7:19157043..19157088,-!p2@TWIST1!0.57!7.98!TWIST1;;chr11:65686855..65686946,+!p1@DRAP1!0.56!249.12!DRAP1;;chr1:8938709..8938720,-!p3@ENO1!0.56!161.82!ENO1;;chr7:19157248..19157268,-!p1@TWIST1!0.56!8.52!TWIST1;;chr2:121493492..121493537,+!p2@GLI2!0.56!4.79!GLI2;;chr17:59477275..59477286,+!p3@TBX2!0.56!3.73!TBX2;;chr15:67418099..67418118,+!p16@SMAD3!0.56!2.66!SMAD3;;chr8:55370720..55370733,+!p2@SOX17!0.56!2.66!SOX17;;chr11:125034640..125034655,+!p1@PKNOX2!0.56!2.66!PKNOX2;;chr11:65668011..65668020,-!p3@FOSL1!0.56!2.66!FOSL1;;chr13:45150455..45150472,-!p8@TSC22D1!0.56!2.66!TSC22D1;;chr9:16705069..16705086,-!p3@BNC2!0.56!2.66!BNC2;;chr1:170632723..170632739,+!p8@PRRX1!0.56!2.66!PRRX1;;chr21:38071403..38071428,+!p2@SIM2!0.56!2.66!SIM2;;chr16:29819446..29819471,+!p9@MAZ!0.55!9.05!MAZ;;chr7:44143978..44143989,+!p2@AEBP1!0.55!5.32!AEBP1;;chr16:67881588..67881612,-!p2@CENPT!0.55!3.73!CENPT;;chr20:42543441..42543497,+!p1@TOX2!0.54!13.84!TOX2;;chr17:46622070..46622109,-!p1@HOXB2!0.54!6.39!HOXB2;;chrX:48900782..48900793,-!p3@TFE3!0.54!5.32!TFE3;;chr8:72756667..72756736,-!p2@MSC!0.54!4.26!MSC;;chr1:8938766..8938774,-!p2@ENO1!0.53!214.52!ENO1;;chr16:29819403..29819442,+!p5@MAZ!0.53!25.02!MAZ;;chr14:62162285..62162296,+!p3@HIF1A!0.53!15.44!HIF1A;;chr16:54320101..54320125,-!p4@IRX3!0.53!3.73!IRX3;;chr6:43140095..43140145,+!p5@SRF!0.53!3.19!SRF;;chr17:3571887..3571918,-!p2@TAX1BP3!0.52!33.00!TAX1BP3;;chr17:41623009..41623053,-!p4@ETV4!0.52!4.26!ETV4;;chr8:106330696..106330719,+!p2@ZFPM2!0.52!3.19!ZFPM2;;chr12:125003087..125003141,-!p4@NCOR2!0.52!3.19!NCOR2;;chr11:62368696..62368759,-!p4@MTA2!0.51!17.57!MTA2;;chr5:174151553..174151610,+!p1@MSX2!0.51!4.26!MSX2;;chr6:10412600..10412637,-!p1@TFAP2A!0.51!4.26!TFAP2A;;chr1:8938736..8938756,-!p1@ENO1!0.50!3181.59!ENO1;;chr2:242576431..242576458,-!p3@THAP4!0.50!6.39!THAP4;;chr8:145159277..145159282,+!p7@MAF1!0.50!3.73!MAF1;;chr17:46621101..46621143,-!p7@HOXB2!0.50!3.19!HOXB2;;chr15:67430381..67430396,+!p21@SMAD3!0.50!2.13!SMAD3;;chr16:54320127..54320148,-!p6@IRX3!0.50!2.13!IRX3;;chr18:19749353..19749367,+!p4@GATA6!0.50!2.13!GATA6;;chr19:13213399..13213414,-!p6@LYL1!0.50!2.13!LYL1;;chr5:50679228..50679288,+!p1@ISL1!0.50!2.13!ISL1;;chr8:72756380..72756427,-!p8@MSC!0.50!2.13!MSC;;chr11:125034605..125034636,+!p2@PKNOX2!0.50!2.13!PKNOX2;;chr22:41721853..41721874,+!p6@ZC3H7B!0.50!2.13!ZC3H7B;;chr2:113994491..113994515,-!p7@PAX8!0.50!2.13!PAX8;;chr2:119604456..119604501,-!p2@EN1!0.50!2.13!EN1;;chr2:85981969..85982019,+!p6@ATOH8!0.50!2.13!ATOH8;;chr3:25470156..25470227,+!p2@RARB!0.50!2.13!RARB;;chr1:170632115..170632136,+!p9@PRRX1!0.50!2.13!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.50!2.13!PRRX1;;chr1:170632907..170632916,+!p22@PRRX1!0.50!2.13!PRRX1;;chr21:38071462..38071474,+!p3@SIM2!0.50!2.13!SIM2;;chr17:1958388..1958404,+!p1@HIC1!0.49!17.57!HIC1;;chr22:38598057..38598071,+!p3@MAFF!0.49!5.86!MAFF;;chr17:7492684..7492778,-!p2@SOX15!0.49!5.32!SOX15;;chr17:47492203..47492214,-!p3@PHB!0.49!3.73!PHB;;chr1:23885981..23886002,-!p1@ID3!0.48!485.46!ID3;;chr11:65430554..65430579,-!p3@RELA!0.48!6.39!RELA;;chr10:77161133..77161176,-!p3@ZNF503!0.48!5.32!ZNF503;;chr2:121493425..121493474,+!p1@GLI2!0.48!5.32!GLI2;;chr15:42749722..42749739,-!p2@ZFP106!0.48!4.26!ZFP106;;chr8:145159846..145159889,+!p6@MAF1!0.48!3.19!MAF1;;chr19:16435625..16435682,+!p1@KLF2!0.47!87.30!KLF2;;chr19:47922750..47922795,-!p1@MEIS3!0.47!3.73!MEIS3;;chr19:1863568..1863586,-!p1@KLF16!0.46!86.23!KLF16;;chr5:92918919..92918942,+!p1@NR2F1!0.46!11.18!NR2F1;;chr2:27357446..27357475,-!p2@PREB!0.46!8.52!PREB;;chr19:56152332..56152347,+!p4@ZNF580!0.46!5.32!ZNF580;;chr1:26496459..26496470,+!p2@ZNF593!0.46!4.26!ZNF593;;chr12:66218573..66218596,+!p7@HMGA2!0.46!3.19!HMGA2;;chr12:115121962..115121987,-!p1@TBX3!0.45!21.29!TBX3;;chr12:66218183..66218209,+!p4@HMGA2!0.45!4.26!HMGA2;;chr17:46622114..46622138,-!p4@HOXB2!0.45!3.19!HOXB2;;chr19:13136130..13136165,+!p6@NFIX!0.45!2.66!NFIX;;chr22:29196492..29196503,-!p3@XBP1!0.44!3.19!XBP1;;chr3:185826286..185826318,-!p5@ETV5!0.44!2.13!ETV5;;chr15:83953397..839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FF:11360-117I1: Difference between revisions

From FANTOM5_SSTAR

Revision as of 17:39, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0