FFCP PHASE1:Hg19::chr6:97372596..97372644,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=114792|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21221|TSSclassifier=S|UniProt=Q96NJ5|association_with_transcript=0bp_to_ENST00000369261_5end|coexpression_cluster_id=C4|description=CAGE_peak_1_at_KLHL32_5end|id=chr6:97372596..97372644,+|ontology_enrichment_celltype=CL:0000542!3.68e-15!53;CL:0000051!3.68e-15!53;CL:0000838!9.52e-15!52;CL:0000084!2.14e-11!25;CL:0000827!2.14e-11!25;CL:0000791!3.82e-10!18;CL:0000789!3.82e-10!18;CL:0002420!3.82e-10!18;CL:0002419!3.82e-10!18;CL:0000790!3.82e-10!18|ontology_enrichment_celltype_v019=CL:0000084;5.63e-09;25!CL:0000791;5.86e-09;18!CL:0000789;5.86e-09;18!CL:0002419;5.86e-09;18!CL:0000542;6.80e-08;53!CL:0000624;2.06e-07;6|ontology_enrichment_celltype_v019_2=CL:0000542,2.64e-11,53;CL:0000051,2.64e-11,53;CL:0000838,9.29e-11,52;CL:0000791,4.12e-09,18;CL:0000789,4.12e-09,18;CL:0002420,4.12e-09,18;CL:0002419,4.12e-09,18;CL:0000790,4.12e-09,18;CL:0000084,4.46e-09,25;CL:0000827,4.46e-09,25;CL:0000624,1.30e-07,6|ontology_enrichment_development_v019=UBERON:0006601;2.76e-12;82!CL:0000790;5.86e-09;18!CL:0000051;6.80e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.61e-47!115;UBERON:0001049!7.99e-35!57;UBERON:0005068!7.99e-35!57;UBERON:0006241!7.99e-35!57;UBERON:0007135!7.99e-35!57;UBERON:0001017!1.41e-31!82;UBERON:0005743!5.51e-31!86;UBERON:0002780!2.01e-29!41;UBERON:0001890!2.01e-29!41;UBERON:0006240!2.01e-29!41;UBERON:0000073!4.50e-29!94;UBERON:0001016!4.50e-29!94;UBERON:0003080!3.02e-28!42;UBERON:0002616!1.72e-27!59;UBERON:0000955!1.90e-26!69;UBERON:0006238!1.90e-26!69;UBERON:0002020!2.51e-24!34;UBERON:0003528!2.51e-24!34;UBERON:0001893!3.41e-24!34;UBERON:0002791!1.96e-23!33;UBERON:0003075!2.68e-23!86;UBERON:0007284!2.68e-23!86;UBERON:0002346!1.39e-22!90;UBERON:0001869!1.69e-22!32;UBERON:0002619!1.52e-19!22;UBERON:0003056!1.07e-18!61;UBERON:0001950!6.62e-18!20;UBERON:0000956!7.19e-17!25;UBERON:0000203!7.19e-17!25;UBERON:0000153!1.67e-13!129;UBERON:0007811!1.67e-13!129;UBERON:0000033!1.33e-11!123;UBERON:0004121!6.05e-11!169;UBERON:0000924!7.54e-11!173;UBERON:0006601!7.54e-11!173;UBERON:0002308!4.95e-09!9;UBERON:0000125!4.95e-09!9;UBERON:0002420!6.21e-09!9;UBERON:0007245!6.21e-09!9;UBERON:0010009!6.21e-09!9;UBERON:0010011!6.21e-09!9;UBERON:0000454!6.21e-09!9;UBERON:0003076!7.99e-08!15;UBERON:0003057!7.99e-08!15;UBERON:0001871!8.52e-08!7;UBERON:0009663!2.44e-07!7|ontology_enrichment_uberon_v019=UBERON:0002780;5.55e-35;41!UBERON:0001890;5.55e-35;41!UBERON:0003528;1.39e-33;34!UBERON:0002020;1.39e-33;34!UBERON:0001893;1.84e-33;34!UBERON:0002791;3.46e-33;32!UBERON:0001869;4.79e-33;32!UBERON:0000073;5.57e-32;53!UBERON:0002616;5.57e-32;53!UBERON:0002619;5.63e-32;22!UBERON:0001950;3.40e-29;20!UBERON:0000956;2.79e-27;25!UBERON:0000203;2.79e-27;25!UBERON:0000955;1.31e-21;68!UBERON:0001017;1.21e-20;75!UBERON:0001016;3.11e-18;83!UBERON:0000125;3.60e-14;9!UBERON:0002308;3.60e-14;9!UBERON:0002420;5.25e-14;9!UBERON:0007245;5.25e-14;9!UBERON:0010009;5.25e-14;9!UBERON:0010011;5.25e-14;9!UBERON:0000454;5.25e-14;9!UBERON:0007023;7.69e-14;114!UBERON:0009663;2.56e-11;7!UBERON:0004732;6.63e-11;13!UBERON:0001871;1.12e-10;6!UBERON:0001894;3.55e-10;7!UBERON:0002298;7.52e-10;6!UBERON:0000200;1.02e-09;6!UBERON:0004733;1.36e-09;12!UBERON:0002028;1.36e-09;12!UBERON:0000349;2.45e-08;5!UBERON:0002021;2.71e-08;5!UBERON:0001872;3.82e-08;5!UBERON:0011216;1.62e-07;132!UBERON:0000369;7.16e-07;4!UBERON:0002435;7.16e-07;4!UBERON:0000204;7.16e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.90e-61,56;UBERON:0005068,3.90e-61,56;UBERON:0006241,3.90e-61,56;UBERON:0007135,3.90e-61,56;UBERON:0000073,8.51e-57,53;UBERON:0002616,8.51e-57,53;UBERON:0001017,1.04e-51,81;UBERON:0002780,1.48e-48,41;UBERON:0001890,1.48e-48,41;UBERON:0003080,1.48e-48,41;UBERON:0006240,1.48e-48,41;UBERON:0000955,1.07e-47,68;UBERON:0006238,1.07e-47,68;UBERON:0001016,1.54e-46,89;UBERON:0007023,2.06e-46,114;UBERON:0003075,3.16e-44,82;UBERON:0007284,3.16e-44,82;UBERON:0002346,2.99e-41,86;UBERON:0003528,6.69e-40,34;UBERON:0002020,6.69e-40,34;UBERON:0001893,1.12e-39,34;UBERON:0002791,5.37e-37,32;UBERON:0001869,8.39e-37,32;UBERON:0010371,1.89e-33,104;UBERON:0003056,2.36e-33,61;UBERON:0002619,5.92e-32,22;UBERON:0001950,3.56e-29,20;UBERON:0000956,2.91e-27,25;UBERON:0000203,2.91e-27,25;UBERON:0010314,2.56e-23,132;UBERON:0011216,1.68e-19,223;UBERON:0004121,9.45e-19,171;UBERON:0000924,9.45e-19,171;UBERON:0006601,9.45e-19,171;UBERON:0000125,3.62e-14,9;UBERON:0002308,3.62e-14,9;UBERON:0002420,5.31e-14,9;UBERON:0007245,5.31e-14,9;UBERON:0010009,5.31e-14,9;UBERON:0010011,5.31e-14,9;UBERON:0000454,5.31e-14,9;UBERON:0003076,2.08e-13,15;UBERON:0003057,2.08e-13,15;UBERON:0000025,1.34e-12,192;UBERON:0009663,2.56e-11,7;UBERON:0004732,6.69e-11,13;UBERON:0001871,1.16e-10,6;UBERON:0001894,3.92e-10,7;UBERON:0006222,3.92e-10,7;UBERON:0002298,7.41e-10,6;UBERON:0000200,1.02e-09,6;UBERON:0004733,1.37e-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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=114792 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21221 | |||
|TSSclassifier=S | |||
|UniProt=Q96NJ5 | |||
|association_with_transcript=0bp_to_ENST00000369261_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_KLHL32_5end | |||
|id=chr6:97372596..97372644,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.68e-15!53;CL:0000051!3.68e-15!53;CL:0000838!9.52e-15!52;CL:0000084!2.14e-11!25;CL:0000827!2.14e-11!25;CL:0000791!3.82e-10!18;CL:0000789!3.82e-10!18;CL:0002420!3.82e-10!18;CL:0002419!3.82e-10!18;CL:0000790!3.82e-10!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.63e-09;25!CL:0000791;5.86e-09;18!CL:0000789;5.86e-09;18!CL:0002419;5.86e-09;18!CL:0000542;6.80e-08;53!CL:0000624;2.06e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.64e-11,53;CL:0000051,2.64e-11,53;CL:0000838,9.29e-11,52;CL:0000791,4.12e-09,18;CL:0000789,4.12e-09,18;CL:0002420,4.12e-09,18;CL:0002419,4.12e-09,18;CL:0000790,4.12e-09,18;CL:0000084,4.46e-09,25;CL:0000827,4.46e-09,25;CL:0000624,1.30e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.76e-12;82!CL:0000790;5.86e-09;18!CL:0000051;6.80e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@KLHL32 | |||
}} |
Revision as of 22:11, 13 September 2013
Short description: | p1@KLHL32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KLHL32_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000369261_5end |
EntrezGene: | KLHL32 |
HGNC: | 21221 |
UniProt: | Q96NJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.64e-11 | 53 |
common lymphoid progenitor | 2.64e-11 | 53 |
lymphoid lineage restricted progenitor cell | 9.29e-11 | 52 |
mature alpha-beta T cell | 4.12e-09 | 18 |
alpha-beta T cell | 4.12e-09 | 18 |
immature T cell | 4.12e-09 | 18 |
mature T cell | 4.12e-09 | 18 |
immature alpha-beta T cell | 4.12e-09 | 18 |
T cell | 4.46e-09 | 25 |
pro-T cell | 4.46e-09 | 25 |
CD4-positive, alpha-beta T cell | 1.30e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.