FFCP PHASE1:Hg19::chr7:37488575..37488588,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9844|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16286|TSSclassifier=S|UniProt=A4D1X5,Q92556|association_with_transcript=-20bp_to_NM_014800_5end|coexpression_cluster_id=C1994|description=CAGE_peak_9_at_ELMO1_5end|id=chr7:37488575..37488588,-|ontology_enrichment_celltype=CL:0000037!2.51e-15!172;CL:0000566!2.51e-15!172;CL:0000988!4.07e-15!182;CL:0000738!1.16e-14!140;CL:0002032!6.85e-14!165;CL:0000837!6.85e-14!165;CL:0000838!1.23e-10!52;CL:0000791!1.86e-10!18;CL:0000789!1.86e-10!18;CL:0002420!1.86e-10!18;CL:0002419!1.86e-10!18;CL:0000790!1.86e-10!18;CL:0002031!2.54e-10!124;CL:0000542!3.55e-10!53;CL:0000051!3.55e-10!53;CL:0000084!1.69e-09!25;CL:0000827!1.69e-09!25;CL:0002087!1.16e-08!119;CL:0000625!4.10e-08!11|ontology_enrichment_celltype_v019=CL:0000625;1.07e-11;11!CL:0000791;1.08e-11;18!CL:0000789;1.08e-11;18!CL:0002419;1.08e-11;18!CL:0000084;5.65e-10;25!CL:0000097;6.11e-08;5|ontology_enrichment_celltype_v019_2=CL:0000791,3.16e-12,18;CL:0000789,3.16e-12,18;CL:0002420,3.16e-12,18;CL:0002419,3.16e-12,18;CL:0000790,3.16e-12,18;CL:0000625,3.64e-12,11;CL:0000084,2.03e-10,25;CL:0000827,2.03e-10,25;CL:0000738,4.21e-08,136;CL:0000838,4.43e-08,52;CL:0000097,7.48e-08,5;CL:0002028,7.48e-08,5;CL:0000542,8.38e-08,53;CL:0000051,8.38e-08,53|ontology_enrichment_development_v019=CL:0000790;1.08e-11;18!UBERON:0006601;9.60e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.31e-46!115;UBERON:0001049!6.96e-28!57;UBERON:0005068!6.96e-28!57;UBERON:0006241!6.96e-28!57;UBERON:0007135!6.96e-28!57;UBERON:0002780!2.23e-23!41;UBERON:0001890!2.23e-23!41;UBERON:0006240!2.23e-23!41;UBERON:0003080!2.19e-22!42;UBERON:0002616!9.71e-22!59;UBERON:0002020!5.56e-20!34;UBERON:0003528!5.56e-20!34;UBERON:0001893!6.08e-20!34;UBERON:0000955!2.06e-19!69;UBERON:0006238!2.06e-19!69;UBERON:0002791!3.14e-19!33;UBERON:0001017!5.43e-19!82;UBERON:0003075!1.08e-18!86;UBERON:0007284!1.08e-18!86;UBERON:0001869!2.84e-18!32;UBERON:0005743!6.72e-18!86;UBERON:0002346!9.19e-17!90;UBERON:0000073!4.17e-16!94;UBERON:0001016!4.17e-16!94;UBERON:0000956!6.14e-14!25;UBERON:0000203!6.14e-14!25;UBERON:0002619!3.85e-13!22;UBERON:0003056!8.28e-13!61;UBERON:0001950!8.08e-12!20;UBERON:0000153!3.21e-08!129;UBERON:0007811!3.21e-08!129;UBERON:0000178!4.06e-08!15;UBERON:0000179!4.06e-08!15;UBERON:0000463!4.06e-08!15;UBERON:0002308!1.27e-07!9;UBERON:0000125!1.27e-07!9;UBERON:0002193!2.50e-07!112;UBERON:0002420!3.95e-07!9;UBERON:0007245!3.95e-07!9;UBERON:0010009!3.95e-07!9;UBERON:0010011!3.95e-07!9;UBERON:0000454!3.95e-07!9;UBERON:0002390!7.26e-07!102;UBERON:0003061!7.26e-07!102;UBERON:0000033!8.99e-07!123;UBERON:0003076!9.13e-07!15;UBERON:0003057!9.13e-07!15|ontology_enrichment_uberon_v019=UBERON:0001893;2.46e-21;34!UBERON:0003528;6.18e-21;34!UBERON:0002020;6.18e-21;34!UBERON:0002791;1.63e-20;32!UBERON:0001869;2.20e-20;32!UBERON:0002780;2.59e-20;41!UBERON:0001890;2.59e-20;41!UBERON:0002619;3.42e-19;22!UBERON:0000073;6.43e-19;53!UBERON:0002616;6.43e-19;53!UBERON:0000956;8.12e-18;25!UBERON:0000203;8.12e-18;25!UBERON:0001950;4.37e-17;20!UBERON:0007023;2.18e-14;114!UBERON:0000178;2.17e-11;15!UBERON:0000179;2.17e-11;15!UBERON:0000463;2.17e-11;15!UBERON:0000955;1.39e-10;68!UBERON:0001017;1.49e-10;75!UBERON:0001016;1.28e-09;83!UBERON:0002298;1.74e-09;6!UBERON:0000125;2.11e-09;9!UBERON:0002308;2.11e-09;9!UBERON:0002420;1.50e-08;9!UBERON:0007245;1.50e-08;9!UBERON:0010009;1.50e-08;9!UBERON:0010011;1.50e-08;9!UBERON:0000454;1.50e-08;9!UBERON:0004732;7.51e-08;13!UBERON:0001871;1.49e-07;6!UBERON:0009663;7.08e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.49e-45,114;UBERON:0001049,7.64e-36,56;UBERON:0005068,7.64e-36,56;UBERON:0006241,7.64e-36,56;UBERON:0007135,7.64e-36,56;UBERON:0000073,1.20e-32,53;UBERON:0002616,1.20e-32,53;UBERON:0002780,3.21e-27,41;UBERON:0001890,3.21e-27,41;UBERON:0003080,3.21e-27,41;UBERON:0006240,3.21e-27,41;UBERON:0003075,7.42e-26,82;UBERON:0007284,7.42e-26,82;UBERON:0003528,8.14e-26,34;UBERON:0002020,8.14e-26,34;UBERON:0001893,9.29e-26,34;UBERON:0000955,1.42e-24,68;UBERON:0006238,1.42e-24,68;UBERON:0001017,3.31e-24,81;UBERON:0002346,6.81e-24,86;UBERON:0002791,2.38e-23,32;UBERON:0001869,3.55e-23,32;UBERON:0001016,1.33e-21,89;UBERON:0002619,3.89e-19,22;UBERON:0000956,8.45e-18,25;UBERON:0000203,8.45e-18,25;UBERON:0003056,3.23e-17,61;UBERON:0010371,5.00e-17,104;UBERON:0001950,5.13e-17,20;UBERON:0010314,6.32e-14,132;UBERON:0000178,2.84e-11,15;UBERON:0000179,2.84e-11,15;UBERON:0000463,2.84e-11,15;UBERON:0003076,1.19e-09,15;UBERON:0003057,1.19e-09,15;UBERON:0000125,1.33e-09,9;UBERON:0002308,1.33e-09,9;UBERON:0002298,1.68e-09,6;UBERON:0002420,6.99e-09,9;UBERON:0007245,6.99e-09,9;UBERON:0010009,6.99e-09,9;UBERON:0010011,6.99e-09,9;UBERON:0000454,6.99e-09,9;UBERON:0004732,6.79e-08,13;UBERON:0004121,7.44e-08,171;UBERON:0000924,7.44e-08,171;UBERON:0006601,7.44e-08,171;UBERON:0011216,1.02e-07,223;UBERON:0001871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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9844 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16286 | |||
|TSSclassifier=S | |||
|UniProt=A4D1X5,Q92556 | |||
|association_with_transcript=-20bp_to_NM_014800_5end | |||
|coexpression_cluster_id=C1994 | |||
|description=CAGE_peak_9_at_ELMO1_5end | |||
|id=chr7:37488575..37488588,- | |||
|ontology_enrichment_celltype=CL:0000037!2.51e-15!172;CL:0000566!2.51e-15!172;CL:0000988!4.07e-15!182;CL:0000738!1.16e-14!140;CL:0002032!6.85e-14!165;CL:0000837!6.85e-14!165;CL:0000838!1.23e-10!52;CL:0000791!1.86e-10!18;CL:0000789!1.86e-10!18;CL:0002420!1.86e-10!18;CL:0002419!1.86e-10!18;CL:0000790!1.86e-10!18;CL:0002031!2.54e-10!124;CL:0000542!3.55e-10!53;CL:0000051!3.55e-10!53;CL:0000084!1.69e-09!25;CL:0000827!1.69e-09!25;CL:0002087!1.16e-08!119;CL:0000625!4.10e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.07e-11;11!CL:0000791;1.08e-11;18!CL:0000789;1.08e-11;18!CL:0002419;1.08e-11;18!CL:0000084;5.65e-10;25!CL:0000097;6.11e-08;5 | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p9@ELMO1 | |||
}} |
Revision as of 01:06, 14 September 2013
Short description: | p9@ELMO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_ELMO1_5end |
Coexpression cluster: | C1994_thyroid_optic_Mast_corpus_substantia_thalamus_anaplastic |
Association with transcript: | -20bp_to_NM_014800_5end |
EntrezGene: | ELMO1 |
HGNC: | 16286 |
UniProt: | A4D1X5Q92556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.16e-12 | 18 |
alpha-beta T cell | 3.16e-12 | 18 |
immature T cell | 3.16e-12 | 18 |
mature T cell | 3.16e-12 | 18 |
immature alpha-beta T cell | 3.16e-12 | 18 |
CD8-positive, alpha-beta T cell | 3.64e-12 | 11 |
T cell | 2.03e-10 | 25 |
pro-T cell | 2.03e-10 | 25 |
leukocyte | 4.21e-08 | 136 |
lymphoid lineage restricted progenitor cell | 4.43e-08 | 52 |
mast cell | 7.48e-08 | 5 |
basophil mast progenitor cell | 7.48e-08 | 5 |
lymphocyte | 8.38e-08 | 53 |
common lymphoid progenitor | 8.38e-08 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.