FFCP PHASE1:Hg19::chr17:63133467..63133494,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8787 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10004 | |||
|TSSclassifier=strong | |||
|UniProt=O75916,A8K1G1 | |||
|association_with_transcript=11bp_to_ENST00000262406,ENST00000449996,NM_001081955,NM_001165933,NM_003835_5end | |||
|coexpression_cluster_id=C3665 | |||
|description=CAGE_peak_2_at_RGS9_5end | |||
|id=chr17:63133467..63133494,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.50e-08!18;CL:0000789!1.50e-08!18;CL:0002420!1.50e-08!18;CL:0002419!1.50e-08!18;CL:0000790!1.50e-08!18;CL:0000084!1.54e-08!25;CL:0000827!1.54e-08!25;CL:0000625!1.55e-08!11;CL:0000838!4.40e-07!52;CL:0000542!4.57e-07!53;CL:0000051!4.57e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.13e-17;11!CL:0000791;7.54e-13;18!CL:0000789;7.54e-13;18!CL:0002419;7.54e-13;18!CL:0000084;2.65e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,8.22e-17,11;CL:0000791,8.84e-13,18;CL:0000789,8.84e-13,18;CL:0002420,8.84e-13,18;CL:0002419,8.84e-13,18;CL:0000790,8.84e-13,18;CL:0000838,7.63e-12,52;CL:0000542,1.73e-11,53;CL:0000051,1.73e-11,53;CL:0000084,2.93e-11,25;CL:0000827,2.93e-11,25 | |||
|ontology_enrichment_development_v019=CL:0000790;7.54e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-26!115;UBERON:0001049!9.36e-21!57;UBERON:0005068!9.36e-21!57;UBERON:0006241!9.36e-21!57;UBERON:0007135!9.36e-21!57;UBERON:0001017!1.28e-19!82;UBERON:0005743!4.39e-19!86;UBERON:0000073!1.35e-18!94;UBERON:0001016!1.35e-18!94;UBERON:0002780!3.03e-18!41;UBERON:0001890!3.03e-18!41;UBERON:0006240!3.03e-18!41;UBERON:0000955!1.24e-17!69;UBERON:0006238!1.24e-17!69;UBERON:0002616!1.86e-17!59;UBERON:0003080!2.35e-17!42;UBERON:0003075!9.58e-16!86;UBERON:0007284!9.58e-16!86;UBERON:0002346!7.43e-14!90;UBERON:0002020!8.58e-14!34;UBERON:0003528!8.58e-14!34;UBERON:0001893!1.31e-13!34;UBERON:0002791!3.38e-13!33;UBERON:0001869!5.28e-13!32;UBERON:0003056!5.91e-12!61;UBERON:0000153!2.97e-11!129;UBERON:0007811!2.97e-11!129;UBERON:0000033!1.19e-10!123;UBERON:0002619!8.66e-09!22;UBERON:0000956!9.10e-09!25;UBERON:0000203!9.10e-09!25;UBERON:0004121!1.39e-08!169;UBERON:0000924!9.88e-08!173;UBERON:0006601!9.88e-08!173;UBERON:0001950!1.27e-07!20;UBERON:0002308!6.43e-07!9;UBERON:0000125!6.43e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.22e-21;41!UBERON:0001890;2.22e-21;41!UBERON:0000073;2.71e-19;53!UBERON:0002616;2.71e-19;53!UBERON:0003528;2.19e-17;34!UBERON:0002020;2.19e-17;34!UBERON:0001869;1.25e-16;32!UBERON:0001893;3.76e-16;34!UBERON:0002791;4.41e-16;32!UBERON:0000955;3.08e-13;68!UBERON:0002619;5.82e-13;22!UBERON:0001017;7.19e-13;75!UBERON:0001894;2.89e-12;7!UBERON:0000125;8.06e-12;9!UBERON:0002308;8.06e-12;9!UBERON:0000956;5.70e-11;25!UBERON:0000203;5.70e-11;25!UBERON:0001016;1.01e-10;83!UBERON:0001950;1.20e-10;20!UBERON:0009663;2.91e-09;7!UBERON:0002420;5.79e-09;9!UBERON:0007245;5.79e-09;9!UBERON:0010009;5.79e-09;9!UBERON:0010011;5.79e-09;9!UBERON:0000454;5.79e-09;9!UBERON:0000369;2.21e-08;4!UBERON:0002435;2.21e-08;4!UBERON:0000204;2.21e-08;4!UBERON:0003296;2.90e-08;4!UBERON:0010133;2.90e-08;4!UBERON:0007023;3.42e-08;114!UBERON:0002784;1.80e-07;4!UBERON:0005383;9.62e-07;3!UBERON:0005382;9.62e-07;3!UBERON:0004732;9.80e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.06e-34,56;UBERON:0005068,1.06e-34,56;UBERON:0006241,1.06e-34,56;UBERON:0007135,1.06e-34,56;UBERON:0000073,5.15e-33,53;UBERON:0002616,5.15e-33,53;UBERON:0002780,4.51e-29,41;UBERON:0001890,4.51e-29,41;UBERON:0003080,4.51e-29,41;UBERON:0006240,4.51e-29,41;UBERON:0000955,1.36e-28,68;UBERON:0006238,1.36e-28,68;UBERON:0001017,9.95e-28,81;UBERON:0001016,5.22e-25,89;UBERON:0003075,7.40e-24,82;UBERON:0007284,7.40e-24,82;UBERON:0007023,4.99e-23,114;UBERON:0002346,3.83e-22,86;UBERON:0003056,9.68e-21,61;UBERON:0003528,4.85e-20,34;UBERON:0002020,4.85e-20,34;UBERON:0001893,1.06e-19,34;UBERON:0001869,1.88e-19,32;UBERON:0002791,7.93e-18,32;UBERON:0010371,3.98e-16,104;UBERON:0002619,3.45e-13,22;UBERON:0001894,2.69e-12,7;UBERON:0006222,2.69e-12,7;UBERON:0000125,1.06e-11,9;UBERON:0002308,1.06e-11,9;UBERON:0010314,1.45e-11,132;UBERON:0000956,3.65e-11,25;UBERON:0000203,3.65e-11,25;UBERON:0001950,7.39e-11,20;UBERON:0011216,5.49e-10,223;UBERON:0009663,3.21e-09,7;UBERON:0002420,6.24e-09,9;UBERON:0007245,6.24e-09,9;UBERON:0010009,6.24e-09,9;UBERON:0010011,6.24e-09,9;UBERON:0000454,6.24e-09,9;UBERON:0004121,9.18e-09,171;UBERON:0000924,9.18e-09,171;UBERON:0006601,9.18e-09,171;UBERON:0000369,2.16e-08,4;UBERON:0002435,2.16e-08,4;UBERON:0000204,2.16e-08,4;UBERON:0010082,2.16e-08,4;UBERON:0003296,3.01e-08,4;UBERON:0010133,3.01e-08,4;UBERON:0000025,1.17e-07,192;UBERON:0002784,1.57e-07,4;UBERON:0003076,4.14e-07,15;UBERON:0003057,4.14e-07,15;UBERON:0005383,9.71e-07,3;UBERON:0005382,9.71e-07,3 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.273748850145768,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,3.0706351847777,0.928896739896456,0,0,0,0.542270404062111,1.70603078984906,0,0.553995408531877,1.20326668482085,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.590129310341499,0.393010762749165,0.411202997999018,0.167186495390678,0,0,0,9.02424700769906,0.294605907474837,0.664601683750863,1.35401931882508,7.81357050326618,8.84403563407172,2.95988228286617,3.59255023121603,0.579606171470105,0,0,0,4.75899239329778,1.14966148080576,0.34362744548263,0.506039384039006,2.54852331459277,2.60433381542567,3.8018081777935,2.10805166708882,2.94369205655162,4.99722906209383,3.55165878066025,2.46338399076314,4.23374160771938,6.95344509037119,2.02754165435919,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.982343066232845,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.264818361626438,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0.605429710579726,0.576175924479999,0.468642863667593,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0.204154171254893,0.368502951935304,0.309977343527296,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.500474079487857,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0.646584227275248,0,0.302256294682921,0,0.57978255948989,0.272746120590835,0,0.121973706129595,0.265059536642971,0.232387885739037,0.621966330092223,0,0.36497735907583,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,1.77236972004421,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.811512834825538,0,0,0,0.570762456703795,0,0,0,0,0,0,0.503946384596579,0,0,0,0,1.47798971368783,0.968532774145487,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,1.4377491329495,1.14861935834114,0,0,0,0,3.81089489577993,4.3346767244424,5.60631694634745,5.00537841491019,0,1.30139853857622,0,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0,0.434418072340414,0.979005787313703,0,1.03384013061444,0.862856803274467,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0.0920809889358963,0,0.364182336013434,0,1.80479845162965,0.770153371044148,0,0,0.949964660035881,0,0,0.431831832204279,0,0,0.501689773854853,0.254876273045038,1.66215201785745,0.223874754722178,2.85037839639715,2.87578996127391,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0.464845549297286,0.31481234683064,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0.539617372749944,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0,0.405820753925408,0.6196469961995,0,0.286822704408103,0,0.7133421029625,0,0,0.329294892959902,0,0.349934720244983,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0.507447609232169,2.29391162142713,1.70894156152249,0.714695326373367,1.64544909234478,1.94541993357815,2.16012574895246,0,0.961416640147258,0.962479855263359,1.96032172784825,0.185803175125719,0.28853842595289,0.355709216742071,0.797131363644112,0,0,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0.849523652246594,5.34928244531896,1.70481688083848,0,0,0,0,1.54736358051564,0.779160935160341,0,0,0.597743964753209,1.38141957765574,2.01546198283421,1.02268682502155,3.32328974744888,0.933118762985422,0.269605053441981,0,0,0.690503839458535,4.7896618469388,0,2.90799823828566,1.57705766875147,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,13.2861207872076,12.421433178417,0,4.31259113731776,3.25102380848902,2.4132393686937,0,0.278847488557207,0.538651809526579,0,0,0,0,0,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0.432777279484182,0,0.884575645033392,0.611030144933625,0.593042257361244,0.123563938946503,0,1.81983059047828,0,7.02793337176017,3.10173141666632,0.391329237864179,0.242780379534093,0.394584402849391,1.20990716048664,0.61214552326098,0.505492637027904,0,0.518440956986236,0,0,0.313932918407225,0,0,0.832048038078832,0.347119476670262,0.1959847948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| |||
|short_description=p2@RGS9 | |||
}} |
Revision as of 16:52, 20 January 2014
Short description: | p2@RGS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGS9_5end |
Coexpression cluster: | C3665_pineal_eye_retina_caudate_migratory_globus_putamen |
Association with transcript: | 11bp_to_ENST00000262406, ENST00000449996, NM_001081955, NM_001165933, NM_003835_5end |
EntrezGene: | RGS9 |
HGNC: | 10004 |
UniProt: | O75916A8K1G1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 8.22e-17 | 11 |
mature alpha-beta T cell | 8.84e-13 | 18 |
alpha-beta T cell | 8.84e-13 | 18 |
immature T cell | 8.84e-13 | 18 |
mature T cell | 8.84e-13 | 18 |
immature alpha-beta T cell | 8.84e-13 | 18 |
lymphoid lineage restricted progenitor cell | 7.63e-12 | 52 |
lymphocyte | 1.73e-11 | 53 |
common lymphoid progenitor | 1.73e-11 | 53 |
T cell | 2.93e-11 | 25 |
pro-T cell | 2.93e-11 | 25 |