FFCP PHASE1:Hg19::chr17:73717429..73717443,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3691 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6158 | |||
|TSSclassifier=strong | |||
|UniProt=P16144,A0AVL6 | |||
|association_with_transcript=-72bp_to_ENST00000200181,ENST00000339591,NM_000213,NM_001005731,uc002jpg.2,uc002jph.2_5end | |||
|description=CAGE_peak_4_at_ITGB4_5end | |||
|id=chr17:73717429..73717443,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.33e-16!254;CL:0002076!7.26e-09!43;CL:0000223!2.72e-07!59;CL:0000076!7.54e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002251;4.47e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.58e-08,253;CL:0002076,5.61e-08,42;CL:0002251,4.81e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.41e-08;82 | |||
|ontology_enrichment_disease=DOID:305!7.20e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.50e-41!115;UBERON:0003075!1.97e-28!86;UBERON:0007284!1.97e-28!86;UBERON:0000153!4.53e-26!129;UBERON:0007811!4.53e-26!129;UBERON:0000033!8.46e-26!123;UBERON:0004121!9.67e-26!169;UBERON:0002346!1.19e-25!90;UBERON:0000924!4.72e-24!173;UBERON:0006601!4.72e-24!173;UBERON:0001049!9.10e-24!57;UBERON:0005068!9.10e-24!57;UBERON:0006241!9.10e-24!57;UBERON:0007135!9.10e-24!57;UBERON:0005743!3.51e-22!86;UBERON:0002616!1.38e-20!59;UBERON:0001017!2.61e-20!82;UBERON:0000955!5.48e-19!69;UBERON:0006238!5.48e-19!69;UBERON:0003056!1.61e-18!61;UBERON:0000073!4.86e-18!94;UBERON:0001016!4.86e-18!94;UBERON:0000064!1.12e-16!219;UBERON:0003080!1.71e-15!42;UBERON:0000481!2.74e-15!347;UBERON:0002780!6.54e-15!41;UBERON:0001890!6.54e-15!41;UBERON:0006240!6.54e-15!41;UBERON:0000062!1.66e-14!511;UBERON:0004119!1.94e-13!169;UBERON:0000925!1.94e-13!169;UBERON:0006595!1.94e-13!169;UBERON:0000477!4.35e-13!286;UBERON:0002020!8.45e-13!34;UBERON:0003528!8.45e-13!34;UBERON:0001893!1.45e-12!34;UBERON:0002791!2.28e-12!33;UBERON:0004111!7.18e-12!241;UBERON:0000475!1.29e-11!365;UBERON:0001869!2.23e-11!32;UBERON:0000468!4.10e-11!659;UBERON:0000467!7.15e-11!625;UBERON:0000483!9.96e-11!309;UBERON:0000480!1.03e-10!626;UBERON:0000119!1.17e-10!312;UBERON:0001007!1.38e-10!155;UBERON:0001555!1.38e-10!155;UBERON:0007026!1.38e-10!155;UBERON:0000922!3.51e-10!612;UBERON:0003076!8.57e-10!15;UBERON:0003057!8.57e-10!15;UBERON:0002050!9.00e-10!605;UBERON:0005423!9.00e-10!605;UBERON:0000923!1.72e-09!604;UBERON:0005291!1.72e-09!604;UBERON:0006598!1.72e-09!604;UBERON:0002532!1.72e-09!604;UBERON:0004921!2.56e-09!129;UBERON:0004185!2.56e-09!129;UBERON:0001048!1.82e-08!168;UBERON:0000956!2.57e-08!25;UBERON:0000203!2.57e-08!25;UBERON:0001004!5.55e-08!72;UBERON:0004732!6.15e-08!13;UBERON:0000063!7.00e-08!97;UBERON:0004733!8.41e-08!12;UBERON:0002028!8.41e-08!12;UBERON:0007277!8.41e-08!12;UBERON:0000025!9.21e-08!194;UBERON:0000077!2.38e-07!130;UBERON:0001041!7.30e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.22e-12;53!UBERON:0002616;2.22e-12;53!UBERON:0007023;8.49e-12;114!UBERON:0001893;3.18e-11;34!UBERON:0003528;6.69e-11;34!UBERON:0002020;6.69e-11;34!UBERON:0002791;9.19e-11;32!UBERON:0002780;1.88e-10;41!UBERON:0001890;1.88e-10;41!UBERON:0001869;3.39e-10;32!UBERON:0004732;1.16e-09;13!UBERON:0004733;1.71e-09;12!UBERON:0002028;1.71e-09;12!UBERON:0000955;8.13e-08;68!UBERON:0000956;1.08e-07;25!UBERON:0000203;1.08e-07;25!UBERON:0000125;1.38e-07;9!UBERON:0002308;1.38e-07;9!UBERON:0001017;1.85e-07;75!UBERON:0002680;9.27e-07;9!UBERON:0001895;9.27e-07;9!UBERON:0001044;9.49e-07;6!UBERON:0003293;9.49e-07;6!UBERON:0003294;9.49e-07;6!UBERON:0010047;9.49e-07;6!UBERON:0003408;9.49e-07;6!UBERON:0000167;9.49e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.87e-45,114;UBERON:0010371,6.60e-29,104;UBERON:0003075,3.05e-28,82;UBERON:0007284,3.05e-28,82;UBERON:0002346,8.08e-26,86;UBERON:0004121,4.62e-25,171;UBERON:0000924,4.62e-25,171;UBERON:0006601,4.62e-25,171;UBERON:0001049,2.96e-24,56;UBERON:0005068,2.96e-24,56;UBERON:0006241,2.96e-24,56;UBERON:0007135,2.96e-24,56;UBERON:0000073,7.14e-22,53;UBERON:0002616,7.14e-22,53;UBERON:0001017,7.74e-21,81;UBERON:0010314,2.20e-19,132;UBERON:0000955,2.02e-18,68;UBERON:0006238,2.02e-18,68;UBERON:0011216,3.60e-18,223;UBERON:0003056,4.81e-18,61;UBERON:0001016,1.80e-17,89;UBERON:0002780,2.42e-14,41;UBERON:0001890,2.42e-14,41;UBERON:0003080,2.42e-14,41;UBERON:0006240,2.42e-14,41;UBERON:0003528,3.57e-13,34;UBERON:0002020,3.57e-13,34;UBERON:0001893,6.60e-13,34;UBERON:0003076,5.94e-12,15;UBERON:0003057,5.94e-12,15;UBERON:0002791,6.80e-12,32;UBERON:0001869,1.73e-11,32;UBERON:0000483,4.80e-10,306;UBERON:0004111,5.66e-10,240;UBERON:0000922,8.91e-10,592;UBERON:0000119,1.21e-09,309;UBERON:0004732,1.30e-09,13;UBERON:0004733,1.93e-09,12;UBERON:0002028,1.93e-09,12;UBERON:0007277,1.93e-09,12;UBERON:0002050,1.09e-08,564;UBERON:0004119,2.97e-08,160;UBERON:0000925,2.97e-08,160;UBERON:0006595,2.97e-08,160;UBERON:0005423,3.32e-08,581;UBERON:0000923,5.08e-08,560;UBERON:0010316,5.08e-08,560;UBERON:0005291,5.08e-08,560;UBERON:0006598,5.08e-08,560;UBERON:0010317,5.08e-08,560;UBERON:0002532,5.08e-08,560;UBERON:0000033,7.25e-08,56;UBERON:0000956,7.90e-08,25;UBERON:0000203,7.90e-08,25;UBERON:0000125,1.56e-07,9;UBERON:0002308,1.56e-07,9;UBERON:0000153,2.65e-07,62;UBERON:0007811,2.65e-07,62;UBERON:0001444,2.77e-07,49;UBERON:0000025,5.61e-07,192;UBERON:0001044,9.86e-07,6;UBERON:0003293,9.86e-07,6;UBERON:0003294,9.86e-07,6;UBERON:0010047,9.86e-07,6;UBERON:0000167,9.86e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.74753097704138,2.90143676051299,0.37129905888014,0.662794751455832,0,0,0,0,2.33930010345897,6.5280221198161,10.3440058087769,10.8769675109802,8.07559107930017,12.6798065990751,0,0,0,0,0,0,0,2.71085326900425,5.9160641626686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63220604103932,3.1042115644759,3.60122621341817,3.27447688744282,3.27865759463288,1.85392221392215,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0.347140501607594,17.5245461996443,1.25849830862972,0,0.208994966536811,0.775250277507987,0.71153252537342,0,0,1.52054421143703,1.22031028774085,0,0,0.535798369704479,1.79623498100936,1.35133776579987,0,0.949265659568129,0.366403487860815,1.31780417436063,0,3.48875241714027,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,1.93260853163297,1.63647672354501,2.29443676311203,0.121973706129595,0.265059536642971,0.116193942869518,0,0,0,0,3.85944562915731,0,0,0,0.118306800039844,0.337169380156203,0.482022059766964,0.220587945464788,0.217879444092406,0.474541238222193,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0.368965315629341,8.57839051492628,2.85350742062426,4.49607013030478,1.20634766893957,3.14800713539001,0,0,2.88662684050547,5.56465943880369,0.821860859650752,0.144366447761074,0,0.190254152234598,6.3216351836742,8.58486162094873,0,0,0,0.93733833986777,2.85569617938061,2.41017665312057,2.68675568108545,2.61570544662566,1.53353071666084,0,0,0,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0.448524337381443,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,1.79951384127703,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,2.03275699377971,1.30139853857622,1.54657762555539,2.51274398001523,0,0,0,1.24324654030811,0.49076596687656,0.500170521059677,0.271265023699736,0,0,0.157702415033935,1.99140405487612,0,0,0,0,0,0,14.8808879671683,1.37257369524342,0,0,0,0.606255142892519,0,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,3.00759705454927,0.736647911487171,0,0,0,0.451199612907412,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0.764628819135115,1.66215201785745,1.34324852833307,0,0.261435451024901,1.02580050046556,15.4166883478862,3.25378394664303,1.03041011647722,0.183138929636687,0.41254749960294,1.72279661398852,3.25030123018261,0,0,0,0,0,0,0,0.0852266274161009,0,1.32227932288782,1.72971060628596,3.57315594984836,2.2254711788221,0,0,0,0.616067160352178,0,0,0,0,2.232950216158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,2.98288549449087,2.68120910214315,3.26672954583968,1.12972560932135,6.02707521739722,8.42357378338128,7.53831261012349,5.05391480455311,0,0.764637207142375,0,0,0,0.648473311192717,0,0,0,0,0.490080431962063,0,0,0,0.478278818186467,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,4.68826173670061,0.36408156524854,0,0.852408440419239,2.14870036263921,0.593929361665277,0.614321404198464,0.994147647766298,6.75213198770461,0,0,0,3.58646378851925,5.24939439509181,0,0.409074730008619,0.123084805461069,0,1.52776196950456,0.537063524026827,0,2.66337195219721,0,0,1.93866549219044,5.19501349706367,0,0.520855522170466,0.61221999997337,5.79999660347835,2.73104275885199,1.5255219017566,1.18193840883968,0,0,0.173624994933292,4.42870692906919,5.30624329951795,1.52581736317083,3.87027409759286,2.65992857058193,2.63262476584767,0,3.20674611840788,9.54183205447084,0,3.91958637459702,3.76982106521043,2.28159481036217,1.5950057986596,0.824378340616761,2.13213910407454,1.02193298195737,0,0.332423363800313,0,0,0,0,0.317873157960757,0.843992258112108,0,0.424059214301822,0,6.96683351754953,5.04208117669033,7.94339188413713,0,0,0,8.2229382236426,4.01288823649394,1.87411556580271,0,0.782658475728359,3.64170569301139,4.73501283419269,0,0.30607276163049,3.6648216184523,0,0,15.9516929449724,30.4512599405459,21.6613713700985,45.3995233137244,0,0,0.520679215005393,1.17590876897253,1.04471047896483,4.89234671077684,0.51595809741485,0.967563312890852,0.803982487948041,0.492692742319255,7.17718722014304,0,4.29363407483012,0.274083849293502,0,1.58276989889697,0.977756913674015,1.28254112402454,9.39193176853151,2.79733453414982,3.31407959454444,0.229073192331831,0,0.720273989940749,1.36677789121976,2.12124631155116,1.49494626680975,2.92887969674533,0,0,4.20294202096853,8.21432273351958,0,1.28929632425987,4.73197237702766,9.49560164325664,9.16641696046735,5.0251111720377,2.99518500748487,2.14613024068285,3.12440040418622,1.74677028465488,0,0,0,0,0.0674035438541849,0.492137407573744,0.0846733320657845,6.36183751847443,9.39803502169872,0,0,0,0.2249738915515,0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| |||
|short_description=p4@ITGB4 | |||
}} |
Revision as of 17:21, 20 January 2014
Short description: | p4@ITGB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGB4_5end |
Coexpression cluster: | NA |
Association with transcript: | -72bp_to_ENST00000200181, ENST00000339591, NM_000213, NM_001005731, uc002jpg.2, uc002jph.2_5end |
EntrezGene: | ITGB4 |
HGNC: | 6158 |
UniProt: | P16144A0AVL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.58e-08 | 253 |
endo-epithelial cell | 5.61e-08 | 42 |
epithelial cell of alimentary canal | 4.81e-07 | 20 |