FFCP PHASE1:Hg19::chr3:147127329..147127341,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7545 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |||
|TSSclassifier=strong | |||
|UniProt=Q15915 | |||
|association_with_transcript=148bp_to_NM_003412,uc003ewe.2_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_7_at_ZIC1_5end | |||
|id=chr3:147127329..147127341,+ | |||
|ontology_enrichment_celltype=CL:0000095!9.32e-09!17;CL:0000123!9.32e-09!17;CL:0000243!1.58e-08!15;CL:0000125!1.58e-08!15;CL:0000030!1.58e-08!15;CL:0000339!1.58e-08!15;CL:0002559!7.70e-08!4;CL:0000133!8.12e-08!59;CL:0002319!1.21e-07!25;CL:0000333!2.60e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.11e-14;3!CL:0000067;1.11e-14;3!CL:0005012;1.11e-14;3!CL:0002304;1.11e-14;3!CL:0000346;2.02e-14;3!CL:1000428;2.02e-14;3!CL:0002559;7.77e-09;5!CL:0002590;7.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.26e-15,3;CL:0000067,8.26e-15,3;CL:0005012,8.26e-15,3;CL:0002304,8.26e-15,3;CL:0000346,2.17e-14,3;CL:1000428,2.17e-14,3;CL:0002559,8.10e-09,5;CL:0002590,6.55e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.84e-15;3!UBERON:0006241;2.11e-14;3!UBERON:0003057;2.11e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.91e-62!94;UBERON:0001016!6.91e-62!94;UBERON:0001017!2.37e-60!82;UBERON:0005743!7.53e-59!86;UBERON:0000955!5.65e-56!69;UBERON:0006238!5.65e-56!69;UBERON:0002616!1.79e-53!59;UBERON:0001049!3.79e-51!57;UBERON:0005068!3.79e-51!57;UBERON:0006241!3.79e-51!57;UBERON:0007135!3.79e-51!57;UBERON:0003075!6.99e-46!86;UBERON:0007284!6.99e-46!86;UBERON:0002346!4.72e-43!90;UBERON:0004121!2.03e-41!169;UBERON:0000924!6.31e-40!173;UBERON:0006601!6.31e-40!173;UBERON:0000033!1.40e-35!123;UBERON:0000153!4.74e-33!129;UBERON:0007811!4.74e-33!129;UBERON:0002780!2.13e-30!41;UBERON:0001890!2.13e-30!41;UBERON:0006240!2.13e-30!41;UBERON:0003080!1.89e-29!42;UBERON:0003056!2.97e-29!61;UBERON:0003076!3.12e-24!15;UBERON:0003057!3.12e-24!15;UBERON:0002020!6.17e-24!34;UBERON:0003528!6.17e-24!34;UBERON:0001893!2.07e-23!34;UBERON:0002791!1.82e-22!33;UBERON:0004732!4.41e-21!13;UBERON:0001869!8.71e-21!32;UBERON:0007023!1.25e-19!115;UBERON:0004733!2.06e-19!12;UBERON:0002028!2.06e-19!12;UBERON:0007277!2.06e-19!12;UBERON:0002680!7.19e-15!9;UBERON:0001895!7.19e-15!9;UBERON:0010092!7.19e-15!9;UBERON:0000956!1.31e-14!25;UBERON:0000203!1.31e-14!25;UBERON:0002619!2.58e-13!22;UBERON:0000475!1.01e-12!365;UBERON:0000119!1.42e-12!312;UBERON:0002200!8.14e-12!11;UBERON:0006876!8.14e-12!11;UBERON:0000483!1.18e-11!309;UBERON:0002308!1.50e-11!9;UBERON:0000125!1.50e-11!9;UBERON:0002420!2.72e-11!9;UBERON:0007245!2.72e-11!9;UBERON:0010009!2.72e-11!9;UBERON:0010011!2.72e-11!9;UBERON:0000454!2.72e-11!9;UBERON:0001950!4.68e-11!20;UBERON:0002298!1.61e-10!8;UBERON:0002037!2.04e-10!6;UBERON:0006215!2.04e-10!6;UBERON:0005174!8.82e-09!5;UBERON:0001137!8.82e-09!5;UBERON:0001894!1.24e-08!7;UBERON:0006222!1.24e-08!7;UBERON:0005284!1.41e-08!5;UBERON:0009663!1.44e-08!7;UBERON:0000349!4.41e-08!5;UBERON:0000488!4.67e-08!4;UBERON:0002073!7.70e-08!4;UBERON:0005086!7.70e-08!4;UBERON:0000025!1.36e-07!194;UBERON:0000064!2.45e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;9.71e-28;13!UBERON:0004733;8.07e-24;12!UBERON:0002028;8.07e-24;12!UBERON:0006876;1.53e-19;11!UBERON:0000488;1.40e-18;4!UBERON:0002680;2.80e-18;9!UBERON:0001895;2.80e-18;9!UBERON:0000125;5.11e-17;9!UBERON:0002308;5.11e-17;9!UBERON:0001016;2.72e-16;83!UBERON:0001778;1.11e-14;3!UBERON:0001775;1.11e-14;3!UBERON:0000412;2.02e-14;3!UBERON:0001992;2.02e-14;3!UBERON:0002240;2.11e-14;3!UBERON:0005174;2.11e-14;3!UBERON:0001137;2.11e-14;3!UBERON:0002037;2.53e-13;6!UBERON:0001017;5.40e-13;75!UBERON:0002203;1.99e-12;6!UBERON:0001768;1.99e-12;6!UBERON:0002200;1.99e-12;6!UBERON:0002298;3.43e-12;6!UBERON:0000073;5.10e-12;53!UBERON:0002616;5.10e-12;53!UBERON:0002784;1.11e-10;4!UBERON:0001894;2.47e-10;7!UBERON:0009663;2.47e-10;7!UBERON:0007625;3.22e-10;11!UBERON:0002360;3.68e-10;2!UBERON:0000094;3.68e-10;2!UBERON:0010743;3.68e-10;2!UBERON:0000955;5.38e-10;68!UBERON:0001897;7.44e-10;2!UBERON:0010225;7.44e-10;2!UBERON:0002148;1.48e-09;2!UBERON:0001875;1.48e-09;2!UBERON:0006331;1.48e-09;2!UBERON:0009662;1.48e-09;2!UBERON:0006514;1.48e-09;2!UBERON:0002073;7.77e-09;5!UBERON:0005284;7.77e-09;5!UBERON:0002420;4.70e-08;9!UBERON:0007245;4.70e-08;9!UBERON:0010009;4.70e-08;9!UBERON:0010011;4.70e-08;9!UBERON:0000454;4.70e-08;9!UBERON:0001801;5.78e-08;14!UBERON:0010371;6.31e-08;31!UBERON:0002104;2.54e-07;21!UBERON:0011216;3.01e-07;132!UBERON:0001896;3.37e-07;3!UBERON:0005290;3.37e-07;3!UBERON:0010314;3.53e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.50e-35,15;UBERON:0003057,1.50e-35,15;UBERON:0001016,9.47e-35,89;UBERON:0001017,1.48e-33,81;UBERON:0003075,4.72e-31,82;UBERON:0007284,4.72e-31,82;UBERON:0010371,6.96e-30,104;UBERON:0002346,2.43e-29,86;UBERON:0004121,5.78e-28,171;UBERON:0000924,5.78e-28,171;UBERON:0006601,5.78e-28,171;UBERON:0004732,6.91e-28,13;UBERON:0001049,3.58e-27,56;UBERON:0005068,3.58e-27,56;UBERON:0006241,3.58e-27,56;UBERON:0007135,3.58e-27,56;UBERON:0010314,4.70e-24,132;UBERON:0004733,5.73e-24,12;UBERON:0002028,5.73e-24,12;UBERON:0007277,5.73e-24,12;UBERON:0000955,1.38e-23,68;UBERON:0006238,1.38e-23,68;UBERON:0000073,2.34e-20,53;UBERON:0002616,2.34e-20,53;UBERON:0006876,1.30e-19,11;UBERON:0000488,1.38e-18,4;UBERON:0002680,1.87e-18,9;UBERON:0001895,1.87e-18,9;UBERON:0010092,1.87e-18,9;UBERON:0000125,3.51e-17,9;UBERON:0002308,3.51e-17,9;UBERON:0001778,8.26e-15,3;UBERON:0001775,8.26e-15,3;UBERON:0002240,2.07e-14,3;UBERON:0005174,2.07e-14,3;UBERON:0001137,2.07e-14,3;UBERON:0000412,2.17e-14,3;UBERON:0001992,2.17e-14,3;UBERON:0002037,2.50e-13,6;UBERON:0006215,2.50e-13,6;UBERON:0011216,3.79e-13,223;UBERON:0003056,6.91e-13,61;UBERON:0007023,1.53e-12,114;UBERON:0002203,1.96e-12,6;UBERON:0001768,1.96e-12,6;UBERON:0002200,1.96e-12,6;UBERON:0002298,2.49e-12,6;UBERON:0002784,1.04e-10,4;UBERON:0005085,1.98e-10,31;UBERON:0001894,2.36e-10,7;UBERON:0006222,2.36e-10,7;UBERON:0009663,2.48e-10,7;UBERON:0007625,3.04e-10,11;UBERON:0002360,3.68e-10,2;UBERON:0000094,3.68e-10,2;UBERON:0010743,3.68e-10,2;UBERON:0001897,5.31e-10,2;UBERON:0010225,5.31e-10,2;UBERON:0002148,8.33e-10,2;UBERON:0006331,8.33e-10,2;UBERON:0009662,8.33e-10,2;UBERON:0001875,1.36e-09,2;UBERON:0006514,1.36e-09,2;UBERON:0005284,6.71e-09,5;UBERON:0002073,8.10e-09,5;UBERON:0005086,8.10e-09,5;UBERON:0000119,9.80e-09,309;UBERON:0000483,4.36e-08,306;UBERON:0002420,4.71e-08,9;UBERON:0007245,4.71e-08,9;UBERON:0010009,4.71e-08,9;UBERON:0010011,4.71e-08,9;UBERON:0000454,4.71e-08,9;UBERON:0001801,5.53e-08,14;UBERON:0000019,9.86e-08,20;UBERON:0000047,9.86e-08,20;UBERON:0010312,9.86e-08,20;UBERON:0004088,9.86e-08,20;UBERON:0010230,9.86e-08,20;UBERON:0003072,9.86e-08,20;UBERON:0004128,9.86e-08,20;UBERON:0003071,9.86e-08,20;UBERON:0000970,2.47e-07,21;UBERON:0002104,2.47e-07,21;UBERON:0001896,3.59e-07,3;UBERON:0005290,3.59e-07,3;UBERON:0010096,3.59e-07,3;UBERON:0002780,5.58e-07,41;UBERON:0001890,5.58e-07,41;UBERON:0003080,5.58e-07,41;UBERON:0006240,5.58e-07,41;UBERON:0001456,5.69e-07,22;UBERON:0000988,8.31e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,7.20945859399602,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78139268656271,3.76939975686359,2.98638271356629,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0.302714855289863,14.98057403648,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,1.14027160516907,0,0,3.12899064659632,4.5026865673502,1.38134921352481,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,2.78232971940184,0.821860859650752,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,2.933531432838,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.537182889719687,0,0,0,0,1.52456774533478,0,0,0.167516265334349,0,0,0,0,1.10422342547226,1.50051156317903,0,0,0,0,0,0,0,0,0,0,0,1.37060810223918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0.330037999682352,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.596586391912706,0,0,0,0,0,0,0,0,0,0,0,0,0,2.232950216158,1.89827654831236,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.29875337426592,0,0,0,0,0,0,0.472775363535873,0,0.291604613383254,0,0,0.844175070377856,9.15490417902499,33.7266742790235,19.2105952319806,2.19385397153973,0,0,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,1.40558667435203,0,0,0,0,0,0.30607276163049,2.96976924253893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.677942222341597,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0.67952103036807,0.627617077873999,0,0,1.80126086612937,1.23214841002794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,1.80996138906171,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876336514945499,2.29363678276028,5.10273637069521,0.620964029413834,0.830091809617385,0.124980407962107,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,1.07824811396682,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,1.51243017733031,0.138314504928436,0.968853873791107,4.28308260777463,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.253663240775627,0,0,0,0,0,2.14280734351315,0.336283722218824,0.606965604236632,0,0,0,0,0.951576261675644,0.460409414939944,0,0,0,2.35673384874003,0,0,0,0,0.500335809236594,0,0.116241425368125,7.12818916440576,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0.11294608203896,0,0,0,0,0,0,0,2.35570160537934,1.48523200163543,10.9890489171684,0,0,0,0,0,0,0,0,0,2.29343333042322,5.52200467676146,0.407948941145488,1.30905207102113,0,0,0,0,0.126166424835079,0,0,0,0.26721740526556,0,0.250707539292375,0,0,1.65833887891756,2.37895890482359,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p7@ZIC1 | |||
}} |
Revision as of 21:51, 21 January 2014
Short description: | p7@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ZIC1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 148bp_to_NM_003412, uc003ewe.2_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | Q15915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.26e-15 | 3 |
ciliated epithelial cell | 8.26e-15 | 3 |
multi-ciliated epithelial cell | 8.26e-15 | 3 |
non-pigmented ciliary epithelial cell | 8.26e-15 | 3 |
hair follicle dermal papilla cell | 2.17e-14 | 3 |
stem cell of epidermis | 2.17e-14 | 3 |
hair follicle cell | 8.10e-09 | 5 |
smooth muscle cell of the brain vasculature | 6.55e-07 | 3 |