FFCP PHASE1:Hg19::chr4:145567278..145567296,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14866 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_ENST00000434550_5end | |||
|coexpression_cluster_id=C606 | |||
|description=CAGE_peak_3_at_HHIP_5end | |||
|id=chr4:145567278..145567296,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.72e-20!119;CL:0002139!2.19e-19!24;CL:0000071!4.44e-15!18;CL:0002546!4.44e-15!18;CL:0000359!2.34e-14!32;CL:0000192!1.94e-13!42;CL:0000514!1.94e-13!42;CL:0000115!2.66e-13!35;CL:0000680!1.27e-12!57;CL:0000056!1.27e-12!57;CL:0000355!1.27e-12!57;CL:0002078!8.09e-12!44;CL:0000183!1.01e-11!59;CL:0000187!1.23e-11!54;CL:0000393!4.39e-09!60;CL:0000211!4.39e-09!60;CL:1000413!7.89e-09!9;CL:0000213!1.46e-08!57;CL:0000215!1.46e-08!57;CL:0000220!1.23e-07!246;CL:0002321!2.39e-07!248;CL:0000055!8.59e-07!180;CL:0002543!8.66e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.61e-27;24!CL:0000071;2.20e-20;18!CL:0000115;4.31e-17;36!CL:1000413;1.01e-13;9!CL:0000359;2.41e-13;32!CL:0002078;1.88e-10;45!CL:0002543;3.19e-10;6!CL:0002544;2.37e-09;6!CL:0002138;1.06e-08;6!CL:0000192;9.86e-08;43!CL:0000213;2.49e-07;58!CL:0000215;2.49e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.22e-27,24;CL:0000071,2.94e-20,18;CL:0002546,2.94e-20,18;CL:0000115,4.58e-19,36;CL:0000222,3.50e-18,121;CL:0002078,1.04e-14,45;CL:0000359,1.22e-14,32;CL:1000413,1.38e-13,9;CL:0000213,1.80e-10,58;CL:0000215,1.80e-10,58;CL:0002543,3.19e-10,6;CL:0000192,4.04e-10,43;CL:0000514,4.04e-10,43;CL:0002544,3.17e-09,6;CL:0000680,7.34e-09,58;CL:0000056,7.34e-09,58;CL:0000355,7.34e-09,58;CL:0005020,1.09e-08,6;CL:0002138,1.09e-08,6;CL:0005022,1.09e-08,6;CL:0000187,3.46e-08,55;CL:0000393,9.44e-07,61;CL:0000211,9.44e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;2.20e-20;18!CL:0005022;1.06e-08;6!CL:0000514;9.86e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.89e-39!194;UBERON:0004111!4.71e-34!241;UBERON:0000477!5.18e-33!286;UBERON:0000119!4.42e-31!312;UBERON:0000483!1.11e-30!309;UBERON:0002049!5.03e-30!79;UBERON:0007798!5.03e-30!79;UBERON:0000055!9.80e-28!69;UBERON:0001981!6.47e-26!60;UBERON:0007500!6.47e-26!60;UBERON:0004537!6.47e-26!60;UBERON:0006965!6.47e-26!60;UBERON:0000955!1.39e-23!69;UBERON:0006238!1.39e-23!69;UBERON:0004535!5.73e-23!110;UBERON:0004872!1.09e-22!84;UBERON:0001049!2.06e-22!57;UBERON:0005068!2.06e-22!57;UBERON:0006241!2.06e-22!57;UBERON:0007135!2.06e-22!57;UBERON:0002616!2.35e-22!59;UBERON:0001637!9.76e-22!42;UBERON:0003509!9.76e-22!42;UBERON:0004572!9.76e-22!42;UBERON:0001009!1.56e-21!113;UBERON:0001017!1.81e-21!82;UBERON:0005743!4.73e-21!86;UBERON:0003914!6.05e-21!118;UBERON:0000073!4.29e-20!94;UBERON:0001016!4.29e-20!94;UBERON:0003075!9.99e-18!86;UBERON:0007284!9.99e-18!86;UBERON:0002346!2.23e-17!90;UBERON:0002780!4.90e-17!41;UBERON:0001890!4.90e-17!41;UBERON:0006240!4.90e-17!41;UBERON:0004573!1.21e-16!33;UBERON:0004571!1.21e-16!33;UBERON:0003080!2.81e-16!42;UBERON:0002020!4.47e-16!34;UBERON:0003528!4.47e-16!34;UBERON:0001893!4.85e-16!34;UBERON:0002791!1.80e-15!33;UBERON:0007023!2.63e-15!115;UBERON:0001986!4.44e-15!18;UBERON:0004638!4.44e-15!18;UBERON:0004852!4.44e-15!18;UBERON:0000490!5.80e-15!138;UBERON:0000481!1.47e-14!347;UBERON:0001869!1.51e-14!32;UBERON:0003056!4.12e-13!61;UBERON:0000475!2.45e-12!365;UBERON:0000153!4.01e-12!129;UBERON:0007811!4.01e-12!129;UBERON:0002385!4.23e-12!63;UBERON:0001015!4.23e-12!63;UBERON:0000383!4.23e-12!63;UBERON:0000033!4.97e-12!123;UBERON:0000487!1.01e-11!22;UBERON:0001134!1.69e-11!61;UBERON:0002036!1.69e-11!61;UBERON:0003082!1.69e-11!61;UBERON:0006914!1.83e-11!25;UBERON:0000922!2.26e-11!612;UBERON:0000947!4.09e-11!21;UBERON:0010191!4.09e-11!21;UBERON:0000923!4.78e-11!604;UBERON:0005291!4.78e-11!604;UBERON:0006598!4.78e-11!604;UBERON:0002532!4.78e-11!604;UBERON:0000468!5.47e-11!659;UBERON:0002050!6.56e-11!605;UBERON:0005423!6.56e-11!605;UBERON:0002619!6.68e-11!22;UBERON:0000467!8.94e-11!625;UBERON:0000956!1.22e-10!25;UBERON:0000203!1.22e-10!25;UBERON:0000480!1.22e-10!626;UBERON:0004290!7.10e-10!70;UBERON:0001950!1.30e-09!20;UBERON:0003915!7.89e-09!9;UBERON:0004700!7.89e-09!9;UBERON:0001917!7.89e-09!9;UBERON:0000914!6.94e-08!83;UBERON:0002329!6.94e-08!83;UBERON:0003077!6.94e-08!83;UBERON:0003059!6.94e-08!83;UBERON:0007282!6.94e-08!83;UBERON:0009618!6.94e-08!83;UBERON:0007285!6.94e-08!83;UBERON:0000924!2.15e-07!173;UBERON:0006601!2.15e-07!173;UBERON:0003076!2.22e-07!15;UBERON:0003057!2.22e-07!15;UBERON:0004121!2.30e-07!169;UBERON:0000486!2.45e-07!82;UBERON:0002308!3.44e-07!9;UBERON:0000125!3.44e-07!9;UBERON:0005256!9.27e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.97e-24;42!UBERON:0003509;4.97e-24;42!UBERON:0004572;4.97e-24;42!UBERON:0004638;2.20e-20;18!UBERON:0001986;2.20e-20;18!UBERON:0004852;2.20e-20;18!UBERON:0004573;3.91e-20;33!UBERON:0004571;3.91e-20;33!UBERON:0000055;2.16e-19;65!UBERON:0007500;3.83e-17;56!UBERON:0001981;3.83e-17;56!UBERON:0004537;3.83e-17;56!UBERON:0002049;3.11e-16;75!UBERON:0007798;3.11e-16;75!UBERON:0000487;1.24e-15;22!UBERON:0006914;1.35e-14;25!UBERON:0001893;1.96e-14;34!UBERON:0003528;3.91e-14;34!UBERON:0002020;3.91e-14;34!UBERON:0000947;4.62e-14;21!UBERON:0010191;4.62e-14;21!UBERON:0003914;6.77e-14;74!UBERON:0003915;1.01e-13;9!UBERON:0004700;1.01e-13;9!UBERON:0001917;1.01e-13;9!UBERON:0002791;2.07e-13;32!UBERON:0001869;3.16e-13;32!UBERON:0002780;7.06e-13;41!UBERON:0001890;7.06e-13;41!UBERON:0002619;1.02e-12;22!UBERON:0000073;4.04e-12;53!UBERON:0002616;4.04e-12;53!UBERON:0001950;9.97e-11;20!UBERON:0000956;1.12e-10;25!UBERON:0000203;1.12e-10;25!UBERON:0000490;1.37e-10;33!UBERON:0004535;6.78e-10;109!UBERON:0000125;8.02e-09;9!UBERON:0002308;8.02e-09;9!UBERON:0001017;8.90e-09;75!UBERON:0002298;2.85e-08;6!UBERON:0000955;5.58e-08;68!UBERON:0001009;8.15e-08;112!UBERON:0010260;1.00e-07;9!UBERON:0001016;3.54e-07;83!UBERON:0000025;4.82e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.40e-40,192;UBERON:0000055,5.02e-35,68;UBERON:0002049,6.66e-34,78;UBERON:0007798,6.66e-34,78;UBERON:0004111,1.26e-33,240;UBERON:0007500,9.02e-31,59;UBERON:0001981,9.02e-31,59;UBERON:0004537,9.02e-31,59;UBERON:0006965,9.02e-31,59;UBERON:0001637,1.46e-30,42;UBERON:0003509,1.46e-30,42;UBERON:0004572,1.46e-30,42;UBERON:0004535,4.18e-28,109;UBERON:0004872,2.42e-27,83;UBERON:0001009,7.84e-27,112;UBERON:0000119,1.46e-26,309;UBERON:0000483,2.45e-26,306;UBERON:0001049,1.26e-23,56;UBERON:0005068,1.26e-23,56;UBERON:0006241,1.26e-23,56;UBERON:0007135,1.26e-23,56;UBERON:0004573,6.74e-22,33;UBERON:0004571,6.74e-22,33;UBERON:0000073,3.38e-21,53;UBERON:0002616,3.38e-21,53;UBERON:0000955,1.14e-20,68;UBERON:0006238,1.14e-20,68;UBERON:0004638,2.94e-20,18;UBERON:0001986,2.94e-20,18;UBERON:0004852,2.94e-20,18;UBERON:0003914,3.26e-20,117;UBERON:0001017,1.66e-19,81;UBERON:0003075,1.60e-18,82;UBERON:0007284,1.60e-18,82;UBERON:0001016,3.82e-18,89;UBERON:0002346,5.15e-18,86;UBERON:0002780,6.72e-18,41;UBERON:0001890,6.72e-18,41;UBERON:0003080,6.72e-18,41;UBERON:0006240,6.72e-18,41;UBERON:0003528,1.23e-17,34;UBERON:0002020,1.23e-17,34;UBERON:0001893,1.38e-17,34;UBERON:0010314,2.61e-17,132;UBERON:0002791,1.19e-15,32;UBERON:0000487,1.56e-15,22;UBERON:0001869,2.22e-15,32;UBERON:0006914,1.80e-14,25;UBERON:0003056,3.72e-14,61;UBERON:0000947,5.85e-14,21;UBERON:0010191,5.85e-14,21;UBERON:0003915,1.38e-13,9;UBERON:0004700,1.38e-13,9;UBERON:0001917,1.38e-13,9;UBERON:0002619,8.62e-13,22;UBERON:0010371,6.39e-12,104;UBERON:0007023,5.92e-11,114;UBERON:0001950,8.10e-11,20;UBERON:0000490,8.52e-11,148;UBERON:0000956,9.68e-11,25;UBERON:0000203,9.68e-11,25;UBERON:0000125,4.82e-09,9;UBERON:0002308,4.82e-09,9;UBERON:0000923,6.97e-09,560;UBERON:0010316,6.97e-09,560;UBERON:0005291,6.97e-09,560;UBERON:0006598,6.97e-09,560;UBERON:0010317,6.97e-09,560;UBERON:0002532,6.97e-09,560;UBERON:0002050,1.37e-08,564;UBERON:0002298,2.83e-08,6;UBERON:0007503,5.38e-08,78;UBERON:0003081,7.27e-08,203;UBERON:0001134,7.82e-08,62;UBERON:0002036,7.82e-08,62;UBERON:0003082,7.82e-08,62;UBERON:0005423,9.36e-08,581;UBERON:0010260,9.85e-08,9;UBERON:0000922,2.03e-07,592;UBERON:0002385,2.25e-07,64;UBERON:0001015,2.25e-07,64;UBERON:0000383,2.25e-07,64;UBERON:0003077,4.58e-07,72;UBERON:0007285,4.58e-07,72;UBERON:0003076,6.00e-07,15;UBERON:0003057,6.00e-07,15;UBERON:0002420,6.73e-07,9;UBERON:0007245,6.73e-07,9;UBERON:0010009,6.73e-07,9;UBERON:0010011,6.73e-07,9;UBERON:0000454,6.73e-07,9;UBERON:0007524,7.15e-07,73;UBERON:0004121,7.64e-07,171;UBERON:0000924,7.64e-07,171;UBERON:0006601,7.64e-07,171;UBERON:0009663,7.83e-07,7 | |||
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| |||
|short_description=p3@HHIP | |||
}} |
Revision as of 03:19, 22 January 2014
Short description: | p3@HHIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HHIP_5end |
Coexpression cluster: | C606_Endothelial_extraskeletal_Smooth_mesothelioma_Lymphatic_Fibroblast_lung |
Association with transcript: | -27bp_to_ENST00000434550_5end |
EntrezGene: | HHIP |
HGNC: | 14866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.22e-27 | 24 |
blood vessel endothelial cell | 2.94e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.94e-20 | 18 |
endothelial cell | 4.58e-19 | 36 |
mesodermal cell | 3.50e-18 | 121 |
meso-epithelial cell | 1.04e-14 | 45 |
vascular associated smooth muscle cell | 1.22e-14 | 32 |
endothelial cell of artery | 1.38e-13 | 9 |
lining cell | 1.80e-10 | 58 |
barrier cell | 1.80e-10 | 58 |
vein endothelial cell | 3.19e-10 | 6 |
smooth muscle cell | 4.04e-10 | 43 |
smooth muscle myoblast | 4.04e-10 | 43 |
aortic endothelial cell | 3.17e-09 | 6 |
muscle precursor cell | 7.34e-09 | 58 |
myoblast | 7.34e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.34e-09 | 58 |
lymphangioblast | 1.09e-08 | 6 |
endothelial cell of lymphatic vessel | 1.09e-08 | 6 |
vascular lymphangioblast | 1.09e-08 | 6 |
muscle cell | 3.46e-08 | 55 |
electrically responsive cell | 9.44e-07 | 61 |
electrically active cell | 9.44e-07 | 61 |