FFCP PHASE1:Hg19::chr5:83680689..83680709,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10085 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3173 | |||
|TSSclassifier=strong | |||
|UniProt=O43854,Q8N610 | |||
|association_with_transcript=-78bp_to_ENST00000296591,NM_005711,uc003kio.1,uc003kip.1_5end | |||
|description=CAGE_peak_1_at_EDIL3_5end | |||
|id=chr5:83680689..83680709,- | |||
|ontology_enrichment_celltype=CL:0000055!3.07e-19!180;CL:0000359!2.14e-08!32;CL:0000183!7.71e-08!59;CL:0000393!1.64e-07!60;CL:0000211!1.64e-07!60;CL:0000680!1.81e-07!57;CL:0000056!1.81e-07!57;CL:0000355!1.81e-07!57;CL:0000187!2.48e-07!54;CL:0000192!3.10e-07!42;CL:0000514!3.10e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.97e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.74e-09,32;CL:0000393,1.97e-07,61;CL:0000211,1.97e-07,61;CL:0000680,2.23e-07,58;CL:0000056,2.23e-07,58;CL:0000355,2.23e-07,58;CL:0000192,2.45e-07,43;CL:0000514,2.45e-07,43;CL:0000187,3.16e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.02e-26!82;UBERON:0005743!1.46e-26!86;UBERON:0000955!1.22e-25!69;UBERON:0006238!1.22e-25!69;UBERON:0000073!1.65e-25!94;UBERON:0001016!1.65e-25!94;UBERON:0002616!7.63e-23!59;UBERON:0000475!2.93e-22!365;UBERON:0002346!7.28e-22!90;UBERON:0001049!1.03e-21!57;UBERON:0005068!1.03e-21!57;UBERON:0006241!1.03e-21!57;UBERON:0007135!1.03e-21!57;UBERON:0000477!1.16e-21!286;UBERON:0003075!1.25e-21!86;UBERON:0007284!1.25e-21!86;UBERON:0000025!5.67e-21!194;UBERON:0000481!1.38e-19!347;UBERON:0000033!4.99e-18!123;UBERON:0004111!5.23e-17!241;UBERON:0000924!1.17e-16!173;UBERON:0006601!1.17e-16!173;UBERON:0000153!1.40e-16!129;UBERON:0007811!1.40e-16!129;UBERON:0004121!3.03e-16!169;UBERON:0000119!2.20e-15!312;UBERON:0000483!4.05e-15!309;UBERON:0002780!1.03e-14!41;UBERON:0001890!1.03e-14!41;UBERON:0006240!1.03e-14!41;UBERON:0003080!1.10e-14!42;UBERON:0002020!3.97e-14!34;UBERON:0003528!3.97e-14!34;UBERON:0001893!4.09e-14!34;UBERON:0007023!5.29e-14!115;UBERON:0002791!1.19e-13!33;UBERON:0003056!3.17e-13!61;UBERON:0000468!6.41e-13!659;UBERON:0001869!8.00e-13!32;UBERON:0002619!4.14e-10!22;UBERON:0000064!7.26e-10!219;UBERON:0000956!7.79e-10!25;UBERON:0000203!7.79e-10!25;UBERON:0000922!2.78e-09!612;UBERON:0001950!4.35e-09!20;UBERON:0000467!7.57e-09!625;UBERON:0002050!1.06e-08!605;UBERON:0005423!1.06e-08!605;UBERON:0000480!1.19e-08!626;UBERON:0000923!1.20e-08!604;UBERON:0005291!1.20e-08!604;UBERON:0006598!1.20e-08!604;UBERON:0002532!1.20e-08!604;UBERON:0003076!1.96e-08!15;UBERON:0003057!1.96e-08!15;UBERON:0005256!3.05e-08!143;UBERON:0000062!1.11e-07!511;UBERON:0004732!1.57e-07!13;UBERON:0002385!2.14e-07!63;UBERON:0001015!2.14e-07!63;UBERON:0000383!2.14e-07!63;UBERON:0001134!2.86e-07!61;UBERON:0002036!2.86e-07!61;UBERON:0003082!2.86e-07!61;UBERON:0003914!4.49e-07!118;UBERON:0004733!7.44e-07!12;UBERON:0002028!7.44e-07!12;UBERON:0007277!7.44e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.78e-13;34!UBERON:0003528;1.49e-12;34!UBERON:0002020;1.49e-12;34!UBERON:0002791;2.61e-12;32!UBERON:0001869;3.39e-12;32!UBERON:0001017;3.95e-12;75!UBERON:0000073;4.53e-12;53!UBERON:0002616;4.53e-12;53!UBERON:0002780;1.42e-11;41!UBERON:0001890;1.42e-11;41!UBERON:0000955;1.68e-11;68!UBERON:0002619;1.54e-10;22!UBERON:0000956;2.76e-10;25!UBERON:0000203;2.76e-10;25!UBERON:0001016;8.14e-10;83!UBERON:0001950;1.82e-09;20!UBERON:0004732;8.43e-08;13!UBERON:0004733;4.30e-07;12!UBERON:0002028;4.30e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.58e-28,81;UBERON:0001016,6.31e-27,89;UBERON:0000955,7.08e-27,68;UBERON:0006238,7.08e-27,68;UBERON:0003075,8.54e-23,82;UBERON:0007284,8.54e-23,82;UBERON:0001049,9.19e-23,56;UBERON:0005068,9.19e-23,56;UBERON:0006241,9.19e-23,56;UBERON:0007135,9.19e-23,56;UBERON:0002346,1.05e-22,86;UBERON:0010314,3.57e-21,132;UBERON:0000073,4.54e-21,53;UBERON:0002616,4.54e-21,53;UBERON:0000025,5.10e-19,192;UBERON:0004121,1.52e-16,171;UBERON:0000924,1.52e-16,171;UBERON:0006601,1.52e-16,171;UBERON:0010371,1.78e-15,104;UBERON:0002780,2.28e-15,41;UBERON:0001890,2.28e-15,41;UBERON:0003080,2.28e-15,41;UBERON:0006240,2.28e-15,41;UBERON:0003528,9.38e-15,34;UBERON:0002020,9.38e-15,34;UBERON:0001893,9.70e-15,34;UBERON:0011216,1.77e-14,223;UBERON:0003056,3.10e-14,61;UBERON:0004111,3.58e-14,240;UBERON:0007023,4.90e-14,114;UBERON:0002791,1.40e-13,32;UBERON:0001869,2.20e-13,32;UBERON:0000119,3.05e-13,309;UBERON:0000483,5.48e-13,306;UBERON:0002619,1.55e-10,22;UBERON:0000956,3.01e-10,25;UBERON:0000203,3.01e-10,25;UBERON:0001950,1.83e-09,20;UBERON:0003104,5.57e-09,160;UBERON:0009142,5.57e-09,160;UBERON:0003076,8.91e-09,15;UBERON:0003057,8.91e-09,15;UBERON:0004732,7.91e-08,13;UBERON:0005423,2.32e-07,581;UBERON:0002385,2.51e-07,64;UBERON:0001015,2.51e-07,64;UBERON:0000383,2.51e-07,64;UBERON:0000922,3.00e-07,592;UBERON:0001134,3.43e-07,62;UBERON:0002036,3.43e-07,62;UBERON:0003082,3.43e-07,62;UBERON:0004733,4.04e-07,12;UBERON:0002028,4.04e-07,12;UBERON:0007277,4.04e-07,12;UBERON:0000923,4.93e-07,560;UBERON:0010316,4.93e-07,560;UBERON:0005291,4.93e-07,560;UBERON:0006598,4.93e-07,560;UBERON:0010317,4.93e-07,560;UBERON:0002532,4.93e-07,560 | |||
|phase1_expression=14.7159487209151,21.8382534368803,69.6314756234098,54.0395811106904,123.808223156359,50.5956343978214,78.5229622321763,0.631719873426831,0.261185628199839,0.491467873003018,0.697801167972428,0,0,13.4905324726451,27.8373795611449,24.8760304187157,26.518559233055,32.8639540674318,20.9811103479918,40.5068281072632,79.9682709677472,92.1556881145578,4.00730381983479,4.10623275218653,14.3118609138075,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,10.0605128955545,14.4484694883189,63.6132908196837,79.7127277911064,103.130721500106,59.6464460288324,209.739629100436,9.73708616789899,37.6939975686359,34.2555664203192,13.3598657007667,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0,0,0,1.25396979922086,0.258416759169329,0.35576626268671,1.00416183829401,0,0,0.24406205754817,1.10298924103761,0.81014194788176,0.357198913136319,0.44905874525234,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,90.448895208548,22.6668615879598,26.2170178010173,143.705146995156,20.2160977853064,75.6914760192115,24.5522690178321,143.31384563037,14.0044965929895,10.2380110772963,4.90385709340376,71.8947781313424,103.7116664064,1.17160715916898,0,0,0.597794722207204,0,0.485618833104395,0.140450806702248,0.204154171254893,1.47401180774122,0.826606249406124,24.9480600029231,39.8099756138477,1.82032272387605,1.43723628363248,0.841680569770331,0.750711119231785,0.554128230968366,51.7993592639389,42.6018036160637,90.5935495206779,9.07457465280168,33.7252515095061,49.9724289835448,7.62954844174423,28.8087452241026,11.6449358039436,14.1702297025096,9.1197259602479,12.3206722536124,10.7180705677318,5.80597680761463,12.1505866207835,10.1837015795851,113.603069605317,28.1098354055116,7.79978724628243,0,0,0,2.92736894711029,2.78312513475119,5.34492137199785,4.35376431064556,3.02785021050754,1.82488679537915,9.38697193978896,21.2269509603652,6.90674606762403,24.1471322576629,7.94067429836544,7.68994200258985,10.9580048550766,7.47134192638794,8.49263590039433,8.06153943141903,7.82993043066619,8.89886633857085,9.22240886089127,8.84918460976698,0.738155454624648,11.2193419042757,12.7587943512734,22.0513067078313,0,0,5.90789906681404,0,0,16.642077598957,0,0,0,0,0.977424915930974,0,14.4331342025273,3.4779121492523,226.951005957843,0.144366447761074,0.925971025153221,1.33177906564219,0,0,0,0,0,0,0.335964256397719,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,10.2643467613623,0,0,0,4.93376771119587,14.3866822714982,4.32695886343605,59.9820761116089,3.57656445851882,0,23.6684923760535,15.6011155367049,5.40135485950498,5.67396528093113,1.5985330740966,71.0600628480993,17.3638913725262,27.9901714505461,0.325736184293735,54.7303601063521,15.8390374586686,15.9762869841581,33.9898048854115,16.5955165362215,0,0,0,45.5287225434007,88.4436905922677,18.5427976552934,13.8990054400876,4.72595541865882,5.01370697071708,0,0,0,0,3.30323011489202,1.30139853857622,10.05275456611,5.19300422536481,8.29320377149112,0,0,0,15.5818194483308,25.0085260529839,51.5403545029498,72.5818306742517,35.328939781838,79.9551244222049,0.937131319941706,63.8005731422764,68.2222512167955,24.8335371102012,84.3566510140004,75.0382515964732,0,19.7759169037368,12.3531632571908,0,0,0,0,1.66435439510497,1.81434175997808,13.8940372378515,69.9786598193565,41.2570338816618,11.9169408807802,37.3546291818693,51.634108687098,4.45254199334973,0,1.24293207719189,2.46381468041427,1.03850885836724,1.04589340613963,0,1.00253235151642,0.276242966807689,0.68888668898764,0,0.262248829918848,20.3039825808335,37.8915458553721,39.2174884588428,37.9961984098478,56.5756730865814,3.4120015221269,0,39.2966967305894,4.62681758070868,45.5190015073673,44.650389873082,0.509752546090077,0.831076008928724,14.9996085663859,0,0,1.02580050046556,2.95213181129735,14.3166493652293,2.06082023295445,41.5725370275279,34.7364994665675,0,0,27.3162680735071,3.77015801339276,3.23502095940753,2.76306614507033,2.06754858726796,0.859361958946189,2.17525040871343,2.55679882248303,13.1767412757171,0,0.192190067365106,0,0.10115778085555,6.97268323945929,107.351010269248,2.7881490806424,5.23657086299351,9.58150854570639,4.34966496037536,10.0075078316117,15.600612654877,30.1448279181331,133.195737806584,74.3457756302917,10.747707235076,6.41908482050881,9.86430068570404,9.41938368239076,5.93579110024939,6.58888871366531,7.18655654308687,9.90694159709249,6.34041284692033,13.0590121434084,0,57.5163835529831,53.8815748459453,1.63799893689583,2.96951407102797,35.0325161522753,34.7360166434058,31.1816318363373,26.3070531152258,5.20897980840019,3.27947376023316,36.320957476324,9.2947049429925,20.8454745873859,19.2171211953429,86.3609070505335,31.38705253035,0.709522128141196,23.4329475180407,0.658589785919804,1.13841952129715,5.24902080367474,0,0.670302275535787,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3424620132465,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2897173040096,0,0,0,0,0,4.68826173670061,0,0,0,0,1.18785872333055,0,42.7483488539508,55.2830806493315,26.7140892054974,0,0,48.0187651685078,10.2225048746525,0,32.3169036706809,8.49285157681379,34.5253942304606,5.0326276642503,0,0,7.99011585659162,0,54.4571251708721,55.2519665274275,61.6907852776311,11.9768278800717,0,0,7.97499532978273,0,3.30529745380596,0,3.79217710565611,71.4431302788973,2.43074992906609,33.6581726609259,30.8726882881044,19.8356257212208,10.9473467331912,18.3239523751199,28.3007162328625,0.762569244632931,0.139423744278603,15.4670019592632,235.17640326821,0,0,0,0,6.77822191173781,0,0,19.7795123057731,0,0,0,0,0,0,1.68798451622422,0,0,1.73110911793673,28.8625960012766,11.5879409499374,10.3875124638716,1.18608451472249,2.22415090103705,2.71497068714184,156.572831914113,2.40773294189637,131.656618497641,0,0.19566461893209,0,1.57833761139756,13.308978765353,16.221856366416,9.28842720538773,1.80388103297391,2.69589297632843,0.664653872707185,0.330991955875499,0.313932918407225,0,2.27687636823834,0,0.173559738335131,0,0,12.2308667769421,33.3652902994936,0.0967563312890851,0,0.0821154570532092,3.78257164304836,0,17.1745362993205,12.4708151428543,0.19871461170299,51.0285015404382,7.03984977845291,67.6540442922945,20.4914874949778,80.7230822711806,0,0,0.343189995723929,0.288109595976299,2.36079817574322,0,6.93111450975432,8.47283055129899,70.2767719514257,136.96257961332,91.263883883888,126.637475475094,0,477.039639976152,3.6804229599104,52.2258090379115,28.6450530014605,5.74298419661451,2.1964690054889,6.00916467391199,8.25734392534928,5.50904474391155,77.8247748451592,0,0,0,0,7.08677866906191,0,58.0517673560791,72.0516018330235,3.69732241469544,6.18927464687552,5.40072439437941,0,0.77380195455795,44.9546719269383,2.34804281319486,6.14684516933746,7.55346069143973,0.105600336519406,12.3708264139663,0,8.5763439164804,3.31045985182716,0,15.203988849104,29.3835307008431,6.20515984207877,21.5514344812477,0,86.2163390234234,0.453248366080503,0.293104467356165,0,65.6757418316677,91.5049604059415,0,0.704815022316672,13.3484265709618,27.3535490873419,15.3268450478462,0.992332043623902,0,0,1.27668251554036,0,0.7520696820681,0.919036730290385,1.31149052283922,0,23.9238408591086,37.0959845301968,51.0778997282519,69.9559218741887,85.3044406318394,78.862431735557,54.7860594347474,12.3730603882486,0,0,0,14.9867169858202,4.92731497276806,3.13435086062435,1.16856654923612,2.21922344601045,39.7746311077687,64.1498149469066,10.6777346591584,12.1285236250369,12.5521666723488,6.21748802331122,10.497715649264,18.7970185253169,16.1929120378898,19.5631325664087,23.6382538469288,61.6752777774548,35.4786642031979,13.2226695917552,61.3096391591761,34.5840123223962,19.0941092162687,19.1190791535629,18.0973166352613,93.5525338441747,23.2016103504629,14.7660153228601,15.8272259719982,47.9502613268874,54.5114120052668,100.57310635484,206.446484944482,212.423452204999,78.9491637444274,32.7947184038667,41.9067888130681,35.5121664235118,50.6546154526813,9.01114644323993,11.1890142197131,1.8583668471838,1.02496607435179,30.7433004140767,0.303859956177382,74.3830386496311,0,0,0,47.8310379315762,15.9752390689918,0.211312123358627,0.19998739585493,0,0,73.2095580101218,8.83708561208836,0,1.86623178009892,11.2547046747213,0,2.20172318598255,0,0.33946505990805,49.9551062238955,2.85052257795705,3.35186950783946,62.32885272807,0,0,36.6782981438311,56.9616587876952,46.6946466451261,48.1768359506989,69.4407286898608,68.5088656564122,8.06629427909498,49.0324919971305,59.1000863012575,202.732576767999,1.66851121451744,0.235939446695481,0.183428598521679,1.15525666150338,171.621942960225,2.0710797781803,56.8900395252546,10.1533943271497,19.9688018016485,0,0,52.7345574382512,0,54.0976052793341,60.9240916918801,46.2978424162652,54.6644283871477,10.9394961803644,2.19303106742873,23.8181365626861,26.0289441652238,6.77140866489855,1.07140367175657,2.35398605553177,3.03482802118316,1.59363533945908,2.39496399439125,0,28.4670095666115,78.6409810541943,50.7765811905195,79.4262610740266,14.6825450497531,19.2308077483759,26.3954191058883,0,7.30526976407596,7.12561051021451,2.8665101273223,15.7248397188644,1.10609528212909,0,0,1.60342272946051,1.45051314914126,1.53646629384555,1.38251932362818,1.72090943528111,2.01164401241961,2.8120423570522,6.35080575286394,26.5763967511098,9.61639795559392,2.8666168169323,0,0,0,1.94228651156368,1.43727929598746,8.11870101936739,5.34282092365053,0,0,21.762376612295,0,95.0985469847962,0,10.8043821351123,11.3650971462058,0,5.39326307858592,0.235676547101626,95.9948404192082,93.5696161030321,34.2351139342554,85.8131929173475,0.939839179798536,4.57651004612398,0,0.535661815816973,0,0.320965466756673,5.11235471772562,2.2936464170227,183.474666433858,0,48.6819069766949,11.7814686391902,12.6966441723696,33.1075566168409,39.2849284336706,5.19151874548547,0,0.109265571963696,5.32133704248035,0.815910637935854,0,0.459474497674225,0,5.380287573495,1.60778478093707,78.771096748584,171.90563912247,2.34557380091079,10.9509638473321,0.0645889098360061,0.372448285775147,27.5844381948309,1.0820016907288,2.42540626749863,1.95945073107265,0,1.48174516632093,4.94883217209467,25.614847454043,3.5003405502719,0.106727345877715,0,2.15580485055809,25.81050366438,23.4703572831104,4.06896178315738,3.32878387092756,6.84330898209489,0 | |||
|short_description=p1@EDIL3 | |||
}} |
Revision as of 06:19, 22 January 2014
Short description: | p1@EDIL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EDIL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -78bp_to_ENST00000296591, NM_005711, uc003kio.1, uc003kip.1_5end |
EntrezGene: | EDIL3 |
HGNC: | 3173 |
UniProt: | O43854Q8N610 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.74e-09 | 32 |
electrically responsive cell | 1.97e-07 | 61 |
electrically active cell | 1.97e-07 | 61 |
muscle precursor cell | 2.23e-07 | 58 |
myoblast | 2.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.23e-07 | 58 |
smooth muscle cell | 2.45e-07 | 43 |
smooth muscle myoblast | 2.45e-07 | 43 |
muscle cell | 3.16e-07 | 55 |