FFCP PHASE1:Hg19::chrX:9880496..9880550,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=630 | |||
|TSSclassifier=strong | |||
|UniProt=F5H3B6 | |||
|association_with_transcript=84bp_to_ENST00000418909,uc004csv.2,uc011mic.1_5end | |||
|description=CAGE_peak_2_at_SHROOM2_5end | |||
|id=chrX:9880496..9880550,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.66e-12!43;CL:0002159!1.95e-10!13;CL:0002368!1.43e-08!13;CL:0000223!3.38e-07!59;CL:0002251!6.29e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.27e-11;13!CL:0002076;4.88e-11;42!CL:0002159;2.14e-10;14!CL:0000244;4.81e-08;4!CL:0000731;4.81e-08;4!CL:0002251;7.93e-08;20!CL:0000240;7.03e-07;6!CL:0000311;7.03e-07;6!CL:0000079;7.03e-07;6!CL:0000237;7.03e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.00e-13,42;CL:0002368,4.85e-11,13;CL:0002159,2.19e-10,14;CL:0000223,5.23e-09,58;CL:0000244,4.50e-08,4;CL:0000731,4.50e-08,4;CL:0002251,9.57e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.39e-12;82!CL:0000357;7.03e-07;6!CL:0000114;7.03e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!1.63e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.18e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.59e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004121!3.31e-44!169;UBERON:0000924!1.88e-43!173;UBERON:0006601!1.88e-43!173;UBERON:0000153!6.86e-38!129;UBERON:0007811!6.86e-38!129;UBERON:0000033!2.04e-37!123;UBERON:0001017!4.28e-37!82;UBERON:0001049!4.66e-37!57;UBERON:0005068!4.66e-37!57;UBERON:0006241!4.66e-37!57;UBERON:0007135!4.66e-37!57;UBERON:0000073!6.84e-36!94;UBERON:0001016!6.84e-36!94;UBERON:0005743!1.91e-35!86;UBERON:0002780!4.06e-33!41;UBERON:0001890!4.06e-33!41;UBERON:0006240!4.06e-33!41;UBERON:0003080!5.53e-32!42;UBERON:0002020!1.43e-30!34;UBERON:0003528!1.43e-30!34;UBERON:0001893!1.52e-30!34;UBERON:0002616!4.29e-30!59;UBERON:0000955!4.33e-30!69;UBERON:0006238!4.33e-30!69;UBERON:0002791!1.69e-29!33;UBERON:0001869!3.55e-29!32;UBERON:0003075!4.58e-29!86;UBERON:0007284!4.58e-29!86;UBERON:0002346!5.65e-28!90;UBERON:0003056!7.05e-26!61;UBERON:0007023!7.54e-26!115;UBERON:0002619!4.62e-24!22;UBERON:0000956!1.23e-23!25;UBERON:0000203!1.23e-23!25;UBERON:0001950!4.49e-22!20;UBERON:0000064!1.38e-18!219;UBERON:0000475!3.71e-18!365;UBERON:0000922!1.06e-12!612;UBERON:0002050!1.69e-12!605;UBERON:0005423!1.69e-12!605;UBERON:0000923!4.08e-12!604;UBERON:0005291!4.08e-12!604;UBERON:0006598!4.08e-12!604;UBERON:0002532!4.08e-12!604;UBERON:0000467!1.65e-11!625;UBERON:0000480!2.07e-11!626;UBERON:0000062!3.84e-11!511;UBERON:0000481!7.26e-11!347;UBERON:0000468!1.88e-10!659;UBERON:0000483!3.19e-10!309;UBERON:0000119!3.31e-10!312;UBERON:0004111!2.00e-09!241;UBERON:0000477!3.82e-09!286;UBERON:0007196!4.47e-09!14;UBERON:0001558!4.47e-09!14;UBERON:0002308!2.40e-08!9;UBERON:0000125!2.40e-08!9;UBERON:0000200!2.54e-08!6;UBERON:0002420!2.68e-08!9;UBERON:0007245!2.68e-08!9;UBERON:0010009!2.68e-08!9;UBERON:0010011!2.68e-08!9;UBERON:0000454!2.68e-08!9;UBERON:0000165!3.96e-08!28;UBERON:0000930!3.96e-08!28;UBERON:0001004!7.72e-08!72;UBERON:0000166!1.08e-07!21;UBERON:0001871!1.33e-07!7;UBERON:0000161!2.27e-07!35;UBERON:0002021!2.58e-07!5;UBERON:0001872!2.99e-07!5;UBERON:0003126!5.01e-07!7;UBERON:0001005!5.01e-07!7;UBERON:0003076!9.11e-07!15;UBERON:0003057!9.11e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.47e-37;22!UBERON:0001869;7.56e-34;32!UBERON:0001950;8.33e-34;20!UBERON:0003528;8.38e-33;34!UBERON:0002020;8.38e-33;34!UBERON:0001893;1.25e-32;34!UBERON:0000956;9.01e-32;25!UBERON:0000203;9.01e-32;25!UBERON:0002791;2.26e-31;32!UBERON:0002780;2.54e-24;41!UBERON:0001890;2.54e-24;41!UBERON:0000073;3.51e-20;53!UBERON:0002616;3.51e-20;53!UBERON:0001017;5.45e-16;75!UBERON:0000955;2.09e-15;68!UBERON:0001016;5.16e-13;83!UBERON:0000200;4.09e-12;6!UBERON:0002021;1.58e-10;5!UBERON:0001872;2.16e-10;5!UBERON:0002298;1.46e-09;6!UBERON:0001871;1.73e-09;6!UBERON:0000365;1.78e-09;5!UBERON:0000349;9.53e-09;5!UBERON:0000486;2.35e-08;12!UBERON:0005910;8.50e-08;6!UBERON:0000125;1.09e-07;9!UBERON:0002308;1.09e-07;9!UBERON:0002420;1.15e-07;9!UBERON:0007245;1.15e-07;9!UBERON:0010009;1.15e-07;9!UBERON:0010011;1.15e-07;9!UBERON:0000454;1.15e-07;9!UBERON:0007196;1.24e-07;15!UBERON:0001558;1.24e-07;15!UBERON:0001870;6.52e-07;3!UBERON:0004121;8.95e-07;165 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.73e-38,56;UBERON:0005068,3.73e-38,56;UBERON:0006241,3.73e-38,56;UBERON:0007135,3.73e-38,56;UBERON:0001869,4.69e-38,32;UBERON:0003528,6.80e-38,34;UBERON:0002020,6.80e-38,34;UBERON:0001893,7.42e-38,34;UBERON:0001017,1.67e-37,81;UBERON:0002619,6.45e-37,22;UBERON:0000073,2.82e-36,53;UBERON:0002616,2.82e-36,53;UBERON:0010371,6.44e-36,104;UBERON:0004121,8.51e-36,171;UBERON:0000924,8.51e-36,171;UBERON:0006601,8.51e-36,171;UBERON:0001016,1.66e-35,89;UBERON:0002791,4.44e-35,32;UBERON:0002780,2.35e-34,41;UBERON:0001890,2.35e-34,41;UBERON:0003080,2.35e-34,41;UBERON:0006240,2.35e-34,41;UBERON:0001950,8.15e-34,20;UBERON:0000955,8.48e-33,68;UBERON:0006238,8.48e-33,68;UBERON:0000956,8.99e-32,25;UBERON:0000203,8.99e-32,25;UBERON:0003075,9.61e-27,82;UBERON:0007284,9.61e-27,82;UBERON:0011216,8.73e-26,223;UBERON:0002346,6.56e-25,86;UBERON:0003056,7.04e-25,61;UBERON:0007023,2.53e-20,114;UBERON:0010314,2.32e-17,132;UBERON:0000200,4.61e-12,6;UBERON:0002050,9.25e-12,564;UBERON:0000923,6.86e-11,560;UBERON:0010316,6.86e-11,560;UBERON:0005291,6.86e-11,560;UBERON:0006598,6.86e-11,560;UBERON:0010317,6.86e-11,560;UBERON:0002532,6.86e-11,560;UBERON:0005423,1.27e-10,581;UBERON:0002021,1.67e-10,5;UBERON:0000922,1.97e-10,592;UBERON:0001872,2.09e-10,5;UBERON:0000483,6.41e-10,306;UBERON:0002298,1.11e-09,6;UBERON:0000119,1.17e-09,309;UBERON:0000365,1.47e-09,5;UBERON:0001871,1.58e-09,6;UBERON:0000349,7.69e-09,5;UBERON:0005910,7.28e-08,6;UBERON:0000125,7.63e-08,9;UBERON:0002308,7.63e-08,9;UBERON:0002420,8.69e-08,9;UBERON:0007245,8.69e-08,9;UBERON:0010009,8.69e-08,9;UBERON:0010011,8.69e-08,9;UBERON:0000454,8.69e-08,9;UBERON:0001004,9.18e-08,74;UBERON:0004111,1.00e-07,240;UBERON:0007196,1.28e-07,15;UBERON:0001558,1.28e-07,15;UBERON:0001870,6.99e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0.684372125364421,0,0,0,0.0787107813136792,0,0,0,3.67768489791571,7.8313538882345,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.527008714158756,1.11332214173056,5.10013403609559,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.741800787835671,0,0,0.168336113954066,0,0,0,0.30648779579902,0.300476117813194,0.340296549480063,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,2.89891279744945,2.45471508531751,2.29443676311203,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37776398502265,1.1240175325762,1.00528972411631,3.14800713539001,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,3.74935335947108,0.503946384596579,1.70130116690864,1.16426079513703,1.45316969256981,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.06551398755941,3.90419561572865,0.773288812777695,3.01529277601828,1.91381625495949,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,13.4339335103201,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,1.72279661398852,10.4009639365843,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,1.15699440752685,2.30628080838127,3.95599408733211,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,2.04718233049067,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73632660280006,3.9353685122798,0,0.30982349809975,0,0,0,0,0,0,0,0,0,3.1753297199419,4.02181365321472,1.08890984861323,0,8.17960208075337,3.36942951335251,8.86860307073351,3.90529780351831,0,0,0,0,0,0,0,0,0,0,4.41072388765857,0,0,2.41882267384608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,2.81338832821025,0.667852230137435,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0.295930216910801,0,0,4.84666373047609,4.91670920257812,13.9729658600836,0,0,0,5.12070517284748,0.508507300585533,0,1.37897349296586,0.874813840149763,0.347249989866585,1.77148277162768,1.32656082487949,0,0.552896299656123,0.886642856860642,3.51016635446356,0,8.5048484009948,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,1.61762719153625,0,2.57690890297873,0,1.36965233252463,0,0.394584402849391,0,10.1004011338062,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,1.86185555087318,3.04707223031409,0.52418000472609,0,0,0,0,2.03676934625681,0,1.35588444468319,0,0,5.00155288051442,0,0,0,0,0,0,0,0,0,3.29971648463514,0,0,0,0,1.80126086612937,0.547621515567972,0,0.429765441419957,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,5.56660782866512,3.26888174667781,0.321506296930038,0,0,0,1.5476039091159,6.62170167572469,10.3984753155772,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39562051629272,1.98348902614035,0,0,0,0,0,0,0,0,5.10673006216145,0,0,0,0,0,13.2910226995048,8.41981227823546,8.63817421874849,4.0138643698305,1.55300672151593,2.04918129706565,0,6.87392243791586,0,0,0,0.936669811613763,3.76794674388145,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74247242449692,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0.76736622782191,0,2.83078695340614,0,0,0,0.743614585554013,0,0,0,0,0,0.3062454773532,3.72529505559465,8.5017945795351,7.82205909380041,8.2046545696302,11.0911546337556,8.43718480063458,5.97459888837849,1.42769420259154,1.37406805901436,0.589848616738702,6.05314375121541,2.07946199070609,0,0,0,0,0,0,0,0,0,5.0653188463796,7.81078098613847,11.7811474005675,5.26351224609427,11.4864709893826,0,1.48863353516788,0,1.02209942111676,0.535701835878287,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,2.71878931907327,7.43232341260195,0,0,0.78493092850514,1.09980912941201,0,1.82631744101899,0,0,0.142953088353313,0,0,0,0,3.10824246244555,1.7071847709395,0.691259661814092,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0.198950775161368,0,0,0,0.301925687133347,0,0,0,1.71603825227734,0,3.53355240806901,0.594092800654172,4.6492130034174,0,0,0.0644578879735772,5.1969401080963,0.178553938605658,1.05868461514708,0,0,0,0.716697915757256,0,7.07111497985513,11.3451179488498,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,1.65833887891756,0.930896962757057,0.852935927603924,0,1.16260037704811,1.42771842880473,0,0,0,2.61260097476354,1.02669990325584,1.27968900727716,0.573777643141411,0.99798106963804,3.90735689332678,0,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| |||
|short_description=p2@SHROOM2 | |||
}} |
Revision as of 04:45, 23 January 2014
Short description: | p2@SHROOM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHROOM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_ENST00000418909, uc004csv.2, uc011mic.1_5end |
EntrezGene: | SHROOM2 |
HGNC: | 630 |
UniProt: | F5H3B6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.00e-13 | 42 |
respiratory epithelial cell | 4.85e-11 | 13 |
general ecto-epithelial cell | 2.19e-10 | 14 |
endodermal cell | 5.23e-09 | 58 |
transitional epithelial cell | 4.50e-08 | 4 |
urothelial cell | 4.50e-08 | 4 |
epithelial cell of alimentary canal | 9.57e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.59e-08 | 14 |