FFCP PHASE1:Hg19::chr20:5903185..5903220,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5903185..5903220,+ | |||
|coexpression_cluster_id=C377 | |coexpression_cluster_id=C377 | ||
|description=CAGE_peak_at_chr20:5903185..5903220,+ | |description=CAGE_peak_at_chr20:5903185..5903220,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.33e-16;3!UBERON:0006601;6.70e-12;82 | |ontology_enrichment_development_v019=UBERON:0006215;4.33e-16;3!UBERON:0006601;6.70e-12;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.66e-70!57;UBERON:0005068!2.66e-70!57;UBERON:0006241!2.66e-70!57;UBERON:0007135!2.66e-70!57;UBERON:0002616!1.35e-61!59;UBERON:0002780!8.50e-58!41;UBERON:0001890!8.50e-58!41;UBERON:0006240!8.50e-58!41;UBERON:0001017!1.36e-57!82;UBERON:0000955!1.57e-57!69;UBERON:0006238!1.57e-57!69;UBERON:0007023!5.74e-57!115;UBERON:0005743!2.91e-56!86;UBERON:0003080!3.62e-56!42;UBERON:0000073!7.22e-54!94;UBERON:0001016!7.22e-54!94;UBERON:0003075!4.97e-50!86;UBERON:0007284!4.97e-50!86;UBERON:0002020!8.51e-49!34;UBERON:0003528!8.51e-49!34;UBERON:0001869!1.70e-48!32;UBERON:0001893!4.12e-48!34;UBERON:0002346!4.06e-47!90;UBERON:0002791!1.60e-46!33;UBERON:0002619!7.25e-43!22;UBERON:0003056!2.14e-39!61;UBERON:0001950!5.25e-39!20;UBERON:0000956!4.80e-37!25;UBERON:0000203!4.80e-37!25;UBERON:0000033!1.40e-34!123;UBERON:0000153!3.05e-32!129;UBERON:0007811!3.05e-32!129;UBERON:0004121!1.95e-28!169;UBERON:0000924!2.19e-27!173;UBERON:0006601!2.19e-27!173;UBERON:0000025!4.28e-17!194;UBERON:0001871!2.14e-16!7;UBERON:0004111!1.20e-15!241;UBERON:0003076!7.91e-15!15;UBERON:0003057!7.91e-15!15;UBERON:0002420!3.20e-13!9;UBERON:0007245!3.20e-13!9;UBERON:0010009!3.20e-13!9;UBERON:0010011!3.20e-13!9;UBERON:0000454!3.20e-13!9;UBERON:0004733!3.69e-13!12;UBERON:0002028!3.69e-13!12;UBERON:0007277!3.69e-13!12;UBERON:0002308!5.57e-13!9;UBERON:0000125!5.57e-13!9;UBERON:0000200!3.03e-12!6;UBERON:0004732!5.56e-12!13;UBERON:0000477!2.34e-11!286;UBERON:0000481!3.90e-11!347;UBERON:0000064!5.72e-11!219;UBERON:0001894!7.76e-11!7;UBERON:0006222!7.76e-11!7;UBERON:0000349!9.26e-11!5;UBERON:0002021!1.59e-10!5;UBERON:0001872!2.36e-10!5;UBERON:0003296!8.87e-10!4;UBERON:0010133!8.87e-10!4;UBERON:0000475!9.30e-10!365;UBERON:0009663!1.50e-09!7;UBERON:0000483!2.07e-09!309;UBERON:0000119!3.57e-09!312;UBERON:0000062!5.52e-09!511;UBERON:0002298!6.24e-09!8;UBERON:0002680!1.67e-08!9;UBERON:0001895!1.67e-08!9;UBERON:0010092!1.67e-08!9;UBERON:0000369!1.85e-08!4;UBERON:0002435!1.85e-08!4;UBERON:0000204!1.85e-08!4;UBERON:0010082!1.85e-08!4;UBERON:0002771!2.88e-07!3;UBERON:0000988!3.53e-07!3;UBERON:0005383!5.74e-07!3;UBERON:0005382!5.74e-07!3;UBERON:0000922!6.58e-07!612;UBERON:0002050!8.48e-07!605;UBERON:0005423!8.48e-07!605 | |ontology_enrichment_uberon=UBERON:0001049!2.66e-70!57;UBERON:0005068!2.66e-70!57;UBERON:0006241!2.66e-70!57;UBERON:0007135!2.66e-70!57;UBERON:0002616!1.35e-61!59;UBERON:0002780!8.50e-58!41;UBERON:0001890!8.50e-58!41;UBERON:0006240!8.50e-58!41;UBERON:0001017!1.36e-57!82;UBERON:0000955!1.57e-57!69;UBERON:0006238!1.57e-57!69;UBERON:0007023!5.74e-57!115;UBERON:0005743!2.91e-56!86;UBERON:0003080!3.62e-56!42;UBERON:0000073!7.22e-54!94;UBERON:0001016!7.22e-54!94;UBERON:0003075!4.97e-50!86;UBERON:0007284!4.97e-50!86;UBERON:0002020!8.51e-49!34;UBERON:0003528!8.51e-49!34;UBERON:0001869!1.70e-48!32;UBERON:0001893!4.12e-48!34;UBERON:0002346!4.06e-47!90;UBERON:0002791!1.60e-46!33;UBERON:0002619!7.25e-43!22;UBERON:0003056!2.14e-39!61;UBERON:0001950!5.25e-39!20;UBERON:0000956!4.80e-37!25;UBERON:0000203!4.80e-37!25;UBERON:0000033!1.40e-34!123;UBERON:0000153!3.05e-32!129;UBERON:0007811!3.05e-32!129;UBERON:0004121!1.95e-28!169;UBERON:0000924!2.19e-27!173;UBERON:0006601!2.19e-27!173;UBERON:0000025!4.28e-17!194;UBERON:0001871!2.14e-16!7;UBERON:0004111!1.20e-15!241;UBERON:0003076!7.91e-15!15;UBERON:0003057!7.91e-15!15;UBERON:0002420!3.20e-13!9;UBERON:0007245!3.20e-13!9;UBERON:0010009!3.20e-13!9;UBERON:0010011!3.20e-13!9;UBERON:0000454!3.20e-13!9;UBERON:0004733!3.69e-13!12;UBERON:0002028!3.69e-13!12;UBERON:0007277!3.69e-13!12;UBERON:0002308!5.57e-13!9;UBERON:0000125!5.57e-13!9;UBERON:0000200!3.03e-12!6;UBERON:0004732!5.56e-12!13;UBERON:0000477!2.34e-11!286;UBERON:0000481!3.90e-11!347;UBERON:0000064!5.72e-11!219;UBERON:0001894!7.76e-11!7;UBERON:0006222!7.76e-11!7;UBERON:0000349!9.26e-11!5;UBERON:0002021!1.59e-10!5;UBERON:0001872!2.36e-10!5;UBERON:0003296!8.87e-10!4;UBERON:0010133!8.87e-10!4;UBERON:0000475!9.30e-10!365;UBERON:0009663!1.50e-09!7;UBERON:0000483!2.07e-09!309;UBERON:0000119!3.57e-09!312;UBERON:0000062!5.52e-09!511;UBERON:0002298!6.24e-09!8;UBERON:0002680!1.67e-08!9;UBERON:0001895!1.67e-08!9;UBERON:0010092!1.67e-08!9;UBERON:0000369!1.85e-08!4;UBERON:0002435!1.85e-08!4;UBERON:0000204!1.85e-08!4;UBERON:0010082!1.85e-08!4;UBERON:0002771!2.88e-07!3;UBERON:0000988!3.53e-07!3;UBERON:0005383!5.74e-07!3;UBERON:0005382!5.74e-07!3;UBERON:0000922!6.58e-07!612;UBERON:0002050!8.48e-07!605;UBERON:0005423!8.48e-07!605 | ||
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|short_description=p@chr20:5903185..5903220,+ | |short_description=p@chr20:5903185..5903220,+ | ||
}} | }} |
Latest revision as of 16:00, 28 July 2015
Short description: | p@chr20:5903185..5903220, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903185..5903220, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data