FFCP PHASE1:Hg19::chr3:115371232..115371236,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:115371232..115371236,+ | |||
|coexpression_cluster_id=C335 | |coexpression_cluster_id=C335 | ||
|description=CAGE_peak_at_chr3:115371232..115371236,+ | |description=CAGE_peak_at_chr3:115371232..115371236,+ | ||
|id=chr3:115371232..115371236,+ | |id=chr3:115371232..115371236,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.76e-09!6;CL:0000031!2.76e-09!6;CL:0000404!2.76e-09!6;CL:0000047!7.53e-07!8 | |ontology_enrichment_celltype=CL:0000540!2.76e-09!6;CL:0000031!2.76e-09!6;CL:0000404!2.76e-09!6;CL:0000047!7.53e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.84e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.23e-14,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.49e-40;3!UBERON:0005425;1.84e-14;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.73e-52!94;UBERON:0001016!2.73e-52!94;UBERON:0001017!4.83e-50!82;UBERON:0001049!1.09e-49!57;UBERON:0005068!1.09e-49!57;UBERON:0006241!1.09e-49!57;UBERON:0007135!1.09e-49!57;UBERON:0005743!3.04e-49!86;UBERON:0002616!2.69e-42!59;UBERON:0000955!8.76e-41!69;UBERON:0006238!8.76e-41!69;UBERON:0003075!1.95e-40!86;UBERON:0007284!1.95e-40!86;UBERON:0002780!2.12e-38!41;UBERON:0001890!2.12e-38!41;UBERON:0006240!2.12e-38!41;UBERON:0002346!4.52e-38!90;UBERON:0002020!1.22e-37!34;UBERON:0003528!1.22e-37!34;UBERON:0001869!2.42e-37!32;UBERON:0003080!2.70e-37!42;UBERON:0001893!9.21e-35!34;UBERON:0002791!4.66e-33!33;UBERON:0000956!4.69e-31!25;UBERON:0000203!4.69e-31!25;UBERON:0002619!4.64e-29!22;UBERON:0004121!7.19e-29!169;UBERON:0001950!9.85e-29!20;UBERON:0003056!1.91e-28!61;UBERON:0000924!7.53e-28!173;UBERON:0006601!7.53e-28!173;UBERON:0000033!3.08e-24!123;UBERON:0000153!7.12e-24!129;UBERON:0007811!7.12e-24!129;UBERON:0007023!4.99e-23!115;UBERON:0000025!1.01e-13!194;UBERON:0001871!1.59e-13!7;UBERON:0003076!4.09e-13!15;UBERON:0003057!4.09e-13!15;UBERON:0004732!1.03e-12!13;UBERON:0004733!8.04e-11!12;UBERON:0002028!8.04e-11!12;UBERON:0007277!8.04e-11!12;UBERON:0004111!5.98e-10!241;UBERON:0000200!9.31e-10!6;UBERON:0000477!3.30e-09!286;UBERON:0002680!8.49e-09!9;UBERON:0001895!8.49e-09!9;UBERON:0010092!8.49e-09!9;UBERON:0000064!1.24e-08!219;UBERON:0000483!1.72e-08!309;UBERON:0000119!2.78e-08!312;UBERON:0002308!3.35e-08!9;UBERON:0000125!3.35e-08!9;UBERON:0002021!4.44e-08!5;UBERON:0001872!5.71e-08!5;UBERON:0002771!6.86e-08!3;UBERON:0000475!4.92e-07!365;UBERON:0000988!8.16e-07!3 | |ontology_enrichment_uberon=UBERON:0000073!2.73e-52!94;UBERON:0001016!2.73e-52!94;UBERON:0001017!4.83e-50!82;UBERON:0001049!1.09e-49!57;UBERON:0005068!1.09e-49!57;UBERON:0006241!1.09e-49!57;UBERON:0007135!1.09e-49!57;UBERON:0005743!3.04e-49!86;UBERON:0002616!2.69e-42!59;UBERON:0000955!8.76e-41!69;UBERON:0006238!8.76e-41!69;UBERON:0003075!1.95e-40!86;UBERON:0007284!1.95e-40!86;UBERON:0002780!2.12e-38!41;UBERON:0001890!2.12e-38!41;UBERON:0006240!2.12e-38!41;UBERON:0002346!4.52e-38!90;UBERON:0002020!1.22e-37!34;UBERON:0003528!1.22e-37!34;UBERON:0001869!2.42e-37!32;UBERON:0003080!2.70e-37!42;UBERON:0001893!9.21e-35!34;UBERON:0002791!4.66e-33!33;UBERON:0000956!4.69e-31!25;UBERON:0000203!4.69e-31!25;UBERON:0002619!4.64e-29!22;UBERON:0004121!7.19e-29!169;UBERON:0001950!9.85e-29!20;UBERON:0003056!1.91e-28!61;UBERON:0000924!7.53e-28!173;UBERON:0006601!7.53e-28!173;UBERON:0000033!3.08e-24!123;UBERON:0000153!7.12e-24!129;UBERON:0007811!7.12e-24!129;UBERON:0007023!4.99e-23!115;UBERON:0000025!1.01e-13!194;UBERON:0001871!1.59e-13!7;UBERON:0003076!4.09e-13!15;UBERON:0003057!4.09e-13!15;UBERON:0004732!1.03e-12!13;UBERON:0004733!8.04e-11!12;UBERON:0002028!8.04e-11!12;UBERON:0007277!8.04e-11!12;UBERON:0004111!5.98e-10!241;UBERON:0000200!9.31e-10!6;UBERON:0000477!3.30e-09!286;UBERON:0002680!8.49e-09!9;UBERON:0001895!8.49e-09!9;UBERON:0010092!8.49e-09!9;UBERON:0000064!1.24e-08!219;UBERON:0000483!1.72e-08!309;UBERON:0000119!2.78e-08!312;UBERON:0002308!3.35e-08!9;UBERON:0000125!3.35e-08!9;UBERON:0002021!4.44e-08!5;UBERON:0001872!5.71e-08!5;UBERON:0002771!6.86e-08!3;UBERON:0000475!4.92e-07!365;UBERON:0000988!8.16e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.66e-22;20!UBERON:0002037;1.16e-20;6!UBERON:0002619;1.56e-20;22!UBERON:0000956;3.86e-18;25!UBERON:0000203;3.86e-18;25!UBERON:0004732;1.16e-16;13!UBERON:0003112;1.84e-14;1!UBERON:0000941;1.84e-14;1!UBERON:0001785;1.84e-14;1!UBERON:0002464;1.84e-14;1!UBERON:0004904;1.84e-14;1!UBERON:0011158;1.84e-14;1!UBERON:0001021;1.84e-14;1!UBERON:0003128;1.84e-14;1!UBERON:0001703;1.84e-14;1!UBERON:0002241;1.84e-14;1!UBERON:0002791;5.12e-14;32!UBERON:0002680;5.40e-14;9!UBERON:0001895;5.40e-14;9!UBERON:0001869;7.73e-14;32!UBERON:0001872;1.18e-11;5!UBERON:0002021;1.18e-11;5!UBERON:0000073;3.83e-11;53!UBERON:0002616;3.83e-11;53!UBERON:0004733;1.21e-10;12!UBERON:0002028;1.21e-10;12!UBERON:0001016;1.35e-10;83!UBERON:0001893;1.35e-10;34!UBERON:0003528;1.54e-10;34!UBERON:0002020;1.54e-10;34!UBERON:0002780;1.73e-09;41!UBERON:0001890;1.73e-09;41!UBERON:0000955;1.95e-09;68!UBERON:0003714;7.03e-08;2!UBERON:0002702;7.03e-08;2!UBERON:0005162;7.03e-08;2!UBERON:0000122;7.03e-08;2!UBERON:0001017;5.13e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.29e-22,20;UBERON:0002037,9.53e-21,6;UBERON:0006215,9.53e-21,6;UBERON:0002619,2.09e-20,22;UBERON:0000073,5.63e-19,53;UBERON:0002616,5.63e-19,53;UBERON:0000956,5.00e-18,25;UBERON:0000203,5.00e-18,25;UBERON:0001049,6.25e-18,56;UBERON:0005068,6.25e-18,56;UBERON:0006241,6.25e-18,56;UBERON:0007135,6.25e-18,56;UBERON:0000955,7.24e-18,68;UBERON:0006238,7.24e-18,68;UBERON:0004732,9.90e-17,13;UBERON:0001016,3.32e-16,89;UBERON:0001017,6.73e-15,81;UBERON:0003075,7.06e-15,82;UBERON:0007284,7.06e-15,82;UBERON:0000941,1.61e-14,1;UBERON:0001785,1.61e-14,1;UBERON:0002464,1.61e-14,1;UBERON:0004904,1.61e-14,1;UBERON:0001021,1.61e-14,1;UBERON:0003902,1.61e-14,1;UBERON:0005425,1.61e-14,1;UBERON:0003112,2.41e-14,1;UBERON:0011158,2.41e-14,1;UBERON:0003128,2.41e-14,1;UBERON:0001703,2.41e-14,1;UBERON:0002241,2.41e-14,1;UBERON:0004761,2.41e-14,1;UBERON:0009617,2.41e-14,1;UBERON:0002791,3.75e-14,32;UBERON:0001869,3.75e-14,32;UBERON:0002346,3.83e-14,86;UBERON:0002680,4.73e-14,9;UBERON:0001895,4.73e-14,9;UBERON:0010092,4.73e-14,9;UBERON:0003528,2.50e-13,34;UBERON:0002020,2.50e-13,34;UBERON:0001893,2.50e-13,34;UBERON:0001872,1.21e-11,5;UBERON:0011216,1.32e-11,223;UBERON:0002021,1.50e-11,5;UBERON:0010371,1.59e-11,104;UBERON:0002780,4.64e-11,41;UBERON:0001890,4.64e-11,41;UBERON:0003080,4.64e-11,41;UBERON:0006240,4.64e-11,41;UBERON:0010314,8.70e-11,132;UBERON:0004733,1.10e-10,12;UBERON:0002028,1.10e-10,12;UBERON:0007277,1.10e-10,12;UBERON:0003056,6.46e-10,61;UBERON:0003076,1.17e-08,15;UBERON:0003057,1.17e-08,15;UBERON:0004121,6.01e-08,171;UBERON:0000924,6.01e-08,171;UBERON:0006601,6.01e-08,171;UBERON:0003714,6.58e-08,2;UBERON:0005162,6.58e-08,2;UBERON:0000122,6.58e-08,2;UBERON:0005253,8.04e-08,2;UBERON:0002702,9.19e-08,2;UBERON:0000025,5.07e-07,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.482385754501632,1.52581736317083,3.31737779793674,2.36438095162838,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0.30607276163049,0,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.321506296930038,0.137539436597234,0,0,0,0.668245123238271,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,1.001527445652,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0.383683113910955,0.215649622793364,0,0.436838552768056,0,0,0,0,0,0,1.60114149657094,0.352675943690684,0,0.513833800771676,0,0.957803154342908,1.02558182120378,3.02486035466062,0.276629009856872,1.13032951942296,1.42769420259154,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.270150338473579,0,1.2401207790071,0.19024743058172,3.28184885410932,0,0,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0,0,0,0,0.203909198930495,0.789273282754189,0,0,0,0.628462359664008,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.203974470572744,3.05445483238264,0,0,0,0,0,0.218531143927391,0.126698501011437,0.203977659483963,0.26721740526556,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.482385754501632,1.52581736317083,3.31737779793674,2.36438095162838,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0.30607276163049,0,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0.321506296930038,0.137539436597234,0,0,0,0.668245123238271,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,1.001527445652,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0.383683113910955,0.215649622793364,0,0.436838552768056,0,0,0,0,0,0,1.60114149657094,0.352675943690684,0,0.513833800771676,0,0.957803154342908,1.02558182120378,3.02486035466062,0.276629009856872,1.13032951942296,1.42769420259154,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.270150338473579,0,1.2401207790071,0.19024743058172,3.28184885410932,0,0,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0,0,0,0,0.203909198930495,0.789273282754189,0,0,0,0.628462359664008,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.203974470572744,3.05445483238264,0,0,0,0,0,0.218531143927391,0.126698501011437,0.203977659483963,0.26721740526556,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:115371232..115371236,+ | |short_description=p@chr3:115371232..115371236,+ | ||
}} | }} |
Latest revision as of 14:36, 29 July 2015
Short description: | p@chr3:115371232..115371236, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:115371232..115371236, + |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.23e-14 | 1 |