FFCP PHASE1:Hg19::chr1:228871206..228871286,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17794 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=337bp_to_uc001htf.2_5end | |||
|cluster_id=chr1:228871206..228871286,+ | |||
|description=CAGE_peak_1_at_RHOU_5end | |||
|id=chr1:228871206..228871286,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.49e-15!65;CL:0002057!3.09e-15!42;CL:0002194!4.38e-15!63;CL:0000576!4.38e-15!63;CL:0000040!4.38e-15!63;CL:0000559!4.38e-15!63;CL:0000860!6.34e-14!45;CL:0000557!5.31e-13!71;CL:0000766!3.54e-12!76;CL:0000839!9.01e-12!70;CL:0000763!6.04e-08!112;CL:0000049!6.04e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.94e-14;33!CL:0002057;9.94e-14;33!CL:0000473;5.69e-13;39!CL:0000234;5.69e-13;39!CL:0000576;1.67e-11;48!CL:0000766;8.75e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,9.40e-18,61;CL:0000473,1.48e-17,48;CL:0000234,1.48e-17,48;CL:0002194,1.62e-17,59;CL:0000576,1.62e-17,59;CL:0000040,1.62e-17,59;CL:0000559,1.62e-17,59;CL:0000860,5.69e-16,42;CL:0002057,5.69e-16,42;CL:0000557,2.00e-14,67;CL:0000766,2.50e-13,72;CL:0000839,8.08e-13,66;CL:0000763,2.05e-08,108;CL:0000049,2.05e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.61e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.11e-41!115;UBERON:0001049!1.37e-21!57;UBERON:0005068!1.37e-21!57;UBERON:0006241!1.37e-21!57;UBERON:0007135!1.37e-21!57;UBERON:0005743!7.15e-19!86;UBERON:0001017!1.42e-18!82;UBERON:0003075!1.68e-18!86;UBERON:0007284!1.68e-18!86;UBERON:0002616!2.69e-18!59;UBERON:0003080!2.03e-17!42;UBERON:0002780!2.81e-17!41;UBERON:0001890!2.81e-17!41;UBERON:0006240!2.81e-17!41;UBERON:0000955!7.52e-17!69;UBERON:0006238!7.52e-17!69;UBERON:0000073!1.79e-16!94;UBERON:0001016!1.79e-16!94;UBERON:0002346!5.33e-16!90;UBERON:0000062!5.61e-16!511;UBERON:0001893!3.18e-15!34;UBERON:0002020!3.58e-15!34;UBERON:0003528!3.58e-15!34;UBERON:0002791!1.17e-14!33;UBERON:0001869!6.06e-14!32;UBERON:0003056!1.54e-13!61;UBERON:0002619!5.49e-12!22;UBERON:0002405!5.86e-12!115;UBERON:0001950!7.53e-11!20;UBERON:0000956!3.17e-10!25;UBERON:0000203!3.17e-10!25;UBERON:0002390!4.07e-09!102;UBERON:0003061!4.07e-09!102;UBERON:0000153!4.98e-09!129;UBERON:0007811!4.98e-09!129;UBERON:0002193!6.21e-09!112;UBERON:0000922!9.16e-09!612;UBERON:0000033!1.04e-08!123;UBERON:0002371!1.25e-08!80;UBERON:0000468!4.00e-08!659;UBERON:0000467!5.81e-08!625;UBERON:0000480!9.59e-08!626;UBERON:0001474!1.13e-07!86;UBERON:0002050!1.75e-07!605;UBERON:0005423!1.75e-07!605;UBERON:0000923!2.71e-07!604;UBERON:0005291!2.71e-07!604;UBERON:0006598!2.71e-07!604;UBERON:0002532!2.71e-07!604;UBERON:0004121!5.30e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.54e-13;34!UBERON:0003528;1.85e-13;34!UBERON:0002020;1.85e-13;34!UBERON:0002791;3.63e-13;32!UBERON:0002780;3.88e-13;41!UBERON:0001890;3.88e-13;41!UBERON:0001869;3.89e-13;32!UBERON:0002619;1.40e-12;22!UBERON:0000073;2.80e-12;53!UBERON:0002616;2.80e-12;53!UBERON:0007023;1.60e-11;114!UBERON:0001950;2.22e-11;20!UBERON:0000956;1.19e-10;25!UBERON:0000203;1.19e-10;25!UBERON:0001017;6.74e-09;75!UBERON:0000955;3.51e-08;68!UBERON:0001016;6.32e-07;83!UBERON:0000125;6.57e-07;9!UBERON:0002308;6.57e-07;9!UBERON:0002420;8.73e-07;9!UBERON:0007245;8.73e-07;9!UBERON:0010009;8.73e-07;9!UBERON:0010011;8.73e-07;9!UBERON:0000454;8.73e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.05e-41,114;UBERON:0001049,1.42e-22,56;UBERON:0005068,1.42e-22,56;UBERON:0006241,1.42e-22,56;UBERON:0007135,1.42e-22,56;UBERON:0000073,7.11e-21,53;UBERON:0002616,7.11e-21,53;UBERON:0003075,4.32e-19,82;UBERON:0007284,4.32e-19,82;UBERON:0001017,1.89e-18,81;UBERON:0002780,5.09e-18,41;UBERON:0001890,5.09e-18,41;UBERON:0003080,5.09e-18,41;UBERON:0006240,5.09e-18,41;UBERON:0000955,8.91e-17,68;UBERON:0006238,8.91e-17,68;UBERON:0002346,1.39e-16,86;UBERON:0001016,1.51e-16,89;UBERON:0001893,7.47e-16,34;UBERON:0003528,8.45e-16,34;UBERON:0002020,8.45e-16,34;UBERON:0002791,1.44e-14,32;UBERON:0001869,1.66e-14,32;UBERON:0003056,3.46e-14,61;UBERON:0011216,3.52e-14,223;UBERON:0002619,1.51e-12,22;UBERON:0001950,2.39e-11,20;UBERON:0000956,1.35e-10,25;UBERON:0000203,1.35e-10,25;UBERON:0002390,2.19e-10,98;UBERON:0003061,2.19e-10,98;UBERON:0010314,3.97e-10,132;UBERON:0002371,4.56e-10,76;UBERON:0002193,5.95e-10,108;UBERON:0000923,8.48e-10,560;UBERON:0010316,8.48e-10,560;UBERON:0005291,8.48e-10,560;UBERON:0006598,8.48e-10,560;UBERON:0010317,8.48e-10,560;UBERON:0002532,8.48e-10,560;UBERON:0002050,1.88e-09,564;UBERON:0002405,2.02e-09,93;UBERON:0010371,2.20e-09,104;UBERON:0000922,3.59e-09,592;UBERON:0001474,8.68e-09,82;UBERON:0005423,2.18e-08,581;UBERON:0000125,6.53e-07,9;UBERON:0002308,6.53e-07,9;UBERON:0002420,8.67e-07,9;UBERON:0007245,8.67e-07,9;UBERON:0010009,8.67e-07,9;UBERON:0010011,8.67e-07,9;UBERON:0000454,8.67e-07,9 | |||
|phase1_expression=2.90685406832891,6.63711624062048,5.63817616383885,2.00146596706261,2.23480547213644,3.48935409640147,0,1.89515962028049,16.9770658329895,1.72013755551056,0.697801167972428,10.7036272343784,4.48403862988371,0.123766352960047,0,2.01697543935533,1.20538905604795,1.46062018077475,0,3.44738962615006,0,1.25381888591235,2.0036519099174,1.50561867580173,0.125542639594803,0,0,0,21.6350352266897,14.9693465257913,29.1054311834223,0,0,0,0,0,2.34880351467878,27.145775018062,27.2740448559393,19.5309783644267,45.4548412707046,30.1221109397651,37.6060328745912,19.9195587128004,10.9584023669755,11.4014508758274,53.4586784883075,37.0051099219643,29.7318116059299,60.4154023876516,42.7788379903598,35.7088167131764,66.880662062904,53.5752287374576,48.753535173963,52.8960974114719,33.567456457115,20.4498370845027,58.4620234428424,56.1625797383164,55.6223299445166,79.8240146451853,56.6476787645434,35.8028790447463,94.3180025542898,83.9730132542887,87.8179371083761,57.0334470132807,46.9334626578181,39.093992046921,87.7829278818385,58.9244217580103,52.2162939277459,22.1818050627539,7.65375479874157,14.0471292490612,28.5314723112098,16.0689275340412,25.2339171114416,14.2506371870624,3.18266683518544,7.48923030434999,0,0.546138611262131,0,0,0,0,0,0,0,1.17447437874188,0,0,2.24203425192614,5.26768169550154,0.196709770113833,1.17903228824749,1.43921049299656,1.83905144929746,0.32592226663359,0,0,0.334231370655521,0,0,0.270803863765016,0.25618263945135,0.910415432919148,3.12432018746985,3.86890024900188,7.53488022911136,0.889719378972363,0.802622484269139,1.04535523804977,5.55215779218074,4.98186641682498,1.71813722741315,3.28925599625354,6.37130828648194,6.51083453856419,6.65316431113862,8.13105643019973,4.99147783502232,12.4930726552346,12.3124171062889,7.39015197228942,1.00803371612366,1.33720097891754,0.868946423296794,134.093776472679,61.0337782330309,19.051521714686,2.53007406669196,0.50133791063589,6.37324683427624,1.5905718941022,2.91980922181582,12.6676654999851,1.77383517970051,2.10803485663503,29.7322501379808,0.728590576585084,0.370784442784429,12.0082535652233,10.7960437125546,10.6366368415092,3.10037811596945,4.57595928624102,2.97166001063652,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0.71153252537342,2.00832367658802,1.20848795132744,7.60272105718513,6.83373761134875,1.10298924103761,0,0.803697554556718,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,3.87780264148325,0,0.496971951695318,0,0.397227542439656,2.29469296599051,5.32002573297536,5.04609840128076,1.06748995729705,1.48000529050296,53.5282980887598,7.40908696383284,9.97117608992098,3.93529311876822,1.15235184896,1.17160715916898,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0.816616685019573,0.61417158655884,5.9928953081944,5.94001428641027,0.494533858557114,0,2.15585442544872,1.17835279767846,1.62654075833553,0,0,0,0.751190294532984,4.99101605904093,0.358779271377724,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,0.337552664482532,0.194874010322397,0,0.184099797284599,1.45481451136931,0.710019185033229,0.906768884048762,0.169560592310488,0.193260853163297,0,0,13.5390813803851,14.1806852103989,21.2634915451219,39.4948619608561,19.9333472191746,1.09493207722749,0,0.643240938192885,0,0,0,7.45332840251016,7.75489574359268,5.78426471720357,3.97058301836618,5.66486554640256,4.50814176311084,4.1797705529651,7.06397274451246,3.46272441251751,3.69077727312324,4.20725321410337,48.9773073484366,32.3419165048192,39.2940607947676,36.3646070170722,31.3118650541144,3.5317047953172,29.1482599347179,5.49016992955282,0,0,0,0,1.3032332212413,2.07986957055916,2.88662684050547,25.620619499492,2.11335649624479,11.4049493731248,19.4453915282177,28.7283769874243,5.53143078571493,4.29243081047436,47.7660991809551,10.2961876661265,31.8070687297878,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0.720599767084807,0.25248486685276,0,0,0,0,0,0,0,2.35475277125258,3.05172048183296,1.83345714552375,9.04902010304444,0,0,0.26593811658487,0,0,0,0,80.3536324358789,14.650783345569,3.29296134712308,0.325736184293735,66.8136863635986,8.71147060226772,213.117639581127,30.5036710510103,137.162943901782,10.9461402577071,27.624140028767,31.6250909224547,0,0,0,0,0,0.179060963239896,0.112085143993527,2.56139988262505,1.07813787429759,1.28343036279748,9.90969034467607,2.60279707715243,7.73288812777695,8.54332953205179,8.29320377149112,0.749007023947182,2.99161459204025,3.31532410748828,0.858840442033979,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,2.0694614258501,0,0.368738337083406,0,1.37060810223918,0,10.5451693322673,8.19713963110744,8.53820462427555,11.5188477149579,3.32870879020994,7.55975733324201,1.73675465473144,0,0,5.38184426873944,0.511707249066704,2.0911009748669,0,0.154209693802656,1.06537035187876,0,0.519254429183621,0.348631135379878,15.1074311989528,0,0.0920809889358963,5.28146461557191,1.0925470080403,1.57349297951309,0.902399225814824,0.385076685522074,0.784349769176855,0,0.844413031143006,1.13733384070897,0.340187410553031,1.51141141271498,1.54227252690289,1.35473218771926,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,2.56450125116389,12.1365418908891,3.25378394664303,44.6167580434637,0.54941678891006,0.495056999523528,0,0,0,1.06337790121334,0.924291702687866,0.307007349452259,0,0,0.290033387828457,0.426133137080504,2.8490251406956,0,0,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0.286249773483982,0.372158369359667,0.632758849437452,10.1034002779627,0.511795582622668,1.28381696410176,2.22742273548156,0,0.539617372749944,3.0199073270966,1.7671860351853,0,0,0,1.46290121726877,0.974853958525138,0,0.272999822815972,1.27264888758341,13.5609739944291,0,0,1.75380354101505,0,2.62357900818653,0.202910376962704,1.54911749049875,0,2.29458163526482,4.71595396862982,0,0,3.16661452946496,5.92730807327823,1.89736586882858,1.04980416073495,0.0962221127255121,0,0,39.5403963262472,0,0,0.886860307073351,0.689170200620878,9.64150457541122,11.4695581071356,10.2536493691349,7.62341681464925,6.58179636937911,5.83625980073446,6.48037724685738,9.51750211553125,0.747768497892312,0,0.245040215981032,0,0,171.878693529768,36.5086164549003,0.798317485731266,0.766021480529467,13.3354357116046,8.11554850686389,0,0,15.1979498899833,2.50634477090067,1.86220955581764,12.847046008296,39.1491431950632,15.7563107945421,29.19795430424,9.83170445787066,16.5520319840388,11.3457416364098,37.5145143171917,2.50565556505718,0,7.57275899732753,0,1.4098700508785,9.54416756081921,28.1295704202036,0.36408156524854,0,8.80822055099881,169.269839679022,120.270695737219,144.672690688738,90.4674359467331,59.7845019744679,0,0.16480387422676,0,51.405980968776,13.2616279454951,1.51159648712566,15.5448397403275,0,0,0,4.47552936689023,3.5810065915881,34.3279051616529,11.974154617347,0,64.9452939883796,95.5511411067068,11.9768278800717,4.42727193844896,0.437299999980979,15.2249910841307,0.227586896570999,0,28.6029094939203,4.48166385213904,0,1.38899995946634,114.260638769985,32.6816348674856,41.1970688056125,13.7118282314719,26.8948333247728,45.1933918137183,0.762569244632931,12.2692894965171,25.4705355647568,27.0042672357393,282.210218970986,236.24212008652,142.436704589753,160.138582185424,112.390247104085,164.174711013739,5.10966490978682,0.31396051279005,0,0,0,0,0,0.317873157960757,0,9.30427006507142,9.89471500037586,0.649165919226273,21.8957624837271,63.8663615714109,47.6603513048228,0.296521128680622,2.47127877893006,1.04421949505455,246.014135379471,16.8541305932746,133.062205171993,0,2.73930466504926,4.12726645207958,43.0096999105836,42.3467506170324,7.34574627913176,80.8788219244646,11.7252267143304,39.0904481567622,0,0.661983911750998,1.56966459203613,0,0,0.138674673013139,3.29763502836749,0.0979923974143777,0,35.9936936578582,0.51595809741485,0.774050650312681,1.46178634172371,1.06750094169172,15.6152316546355,149.41762248871,24.631900745078,0,0,76.0995767389662,57.4921065240321,0,108.220668332852,6.99333633537456,7.2045208577053,0.343609788497747,12.5264348439234,0.432164393964449,0,6.36373893465348,0.543616824294456,0.941425616810999,0,19.6486401133033,192.734912675842,115.685045163734,11.4971929260275,6.87624706271931,0,37.7031241717543,11.4580212005842,30.1506670322262,27.7553810693598,9.01374701086799,18.3000595102335,15.5193821444338,1.44119953416961,27.9590278865889,15.835419643752,14.7524386502288,14.0199371216705,8.0710534842094,0,88.2704955688327,80.0876027936065,4.66184130548556,0.275078873194468,2.07720169014593,23.397284721356,6.1904156364636,58.1980752783876,32.2017300095295,10.4811590707934,22.0833816048342,0.105600336519406,6.27505687664957,0.383830394638891,25.0143364230678,11.9176554665778,0.25426853765475,8.6879936280594,4.32110745600634,3.26587360109409,0,0.410462603746695,0.170388021785422,2.26624183040251,46.4570580759521,62.278237788744,127.085146103404,81.5875152752397,2.9084762440336,0,31.7158615326053,61.9384962092684,24.4401042654845,25.3044671124095,0,0,0.638341257770182,13.0564272808674,12.534494701135,23.2822638340231,29.5085367638824,0.628216385000937,59.3665680577881,58.6946334178443,56.9618734714574,113.535020746634,69.4415862620695,136.301604456337,1.38348634936231,0,0.151649117541648,0,1.41159491818903,0.468334905806882,3.76794674388145,0.298509605773748,1.40227985908335,2.77402930751307,0.189403005275089,0,0,1.37304041038154,14.3669377575077,2.48699520932449,0.147855149989634,1.43367090447332,0.449803112163605,2.48420731002015,1.65882483136342,0.797525143673985,2.08698024724694,49.7352685780793,73.4954059485775,7.32367319768391,0.181848659202559,16.1115835563733,2.78420255927096,2.78667122089031,0,1.03018711554838,0.336749488765919,0,0.385239660814607,1.71553273099941,5.48088013126944,0,0,0.244736704506468,0,32.732953399063,8.33279388399087,6.00743096215996,1.54331230616732,1.01365464391844,2.04993214870357,0.345430341731199,1.21543982470953,69.4057349481688,5.0663680298241,16.7409698794837,2.9441770966052,0.327609848846413,0,0,0,8.85541356461369,0,0,0,0,4.35454082023081,40.9261988171685,5.17559094704073,0,12.7775276684656,0,0.425149840203366,0,0,0,0.0788617450012534,69.6496551008359,0,0,76.6254655400762,70.8482881627925,68.4829255355179,77.7391020472461,18.9053772166289,82.3662876848835,71.3722353692782,335.508137609013,0,0.235939446695481,0,0,0,0,2.78482710962785,44.2988833977125,0,9.37816813479711,212.406329224434,0,0.739280431085226,83.8816800960462,82.7942784530678,56.8388690378256,77.3038726263724,10.3925213713462,61.4048698880044,20.8408694923504,0,0.127762427639595,17.1424587481052,4.70797211106354,10.9253808762594,15.2533668205369,61.0272306718955,0,0.857440047187092,104.333540119437,84.4522412546982,2.2456829767954,0,43.6421596248858,59.8610397579967,207.681673015518,31.0473964973229,16.4104969326152,3.8220135030964,44.3869339337036,3.79232668158544,73.6970636833914,1.91244099532837,9.62053637676303,6.83813341738022,34.3144138958839,35.9455024143328,40.0111443702858,0,0,22.4395136601192,2.97838929107265,0,0,8.50101281663222,2.55190607399632,27.0657793460638,18.1280074412611,23.8177711906493,16.2374020387348,17.9713067431882,0.233939463462106,1.59160620129095,0.83244063544298,0.33883824611688,30.0137610715022,8.75584492686706,104.493810078157,38.9036017697044,27.7487204853298,20.3473107055742,11.0767977137764,126.61896128914,84.0641312925653,42.6882284859234,0.169927114687817,41.4469078291154,24.4295395419858,0,0.535661815816973,0,0.0802413666891683,36.5168194123259,22.4777348868225,137.749339408545,20.0369883985344,93.3523160321259,13.0905207102113,39.677013038655,0.371995018166751,2.77305377178851,1.29787968637137,2.27099564703142,7.75785560942238,2.02717601618299,5.71137446555098,16.3002617211992,76.8241360111303,3.50990555009325,36.3737751447549,28.9401260568673,252.896679034928,132.290801707364,22.602802081504,23.806443146374,4.77957932786445,12.4149428591716,0,44.8075994278281,32.3387502333151,9.5795369074663,11.9781655379848,5.52286834719618,31.6294925781703,23.2862249582209,1.46525883499754,0,3.8614456457388,21.1987476971545,30.5033225124491,19.6808725134415,28.075836303786,38.6138929027597,24.9579504052873,0 | |||
|short_description=p1@RHOU | |||
}} |
Latest revision as of 04:29, 16 September 2015
Short description: | p1@RHOU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RHOU_5end |
Coexpression cluster: | NA |
Association with transcript: | 337bp_to_uc001htf.2_5end |
EntrezGene: | RHOU |
HGNC: | 17794 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 9.40e-18 | 61 |
defensive cell | 1.48e-17 | 48 |
phagocyte | 1.48e-17 | 48 |
monopoietic cell | 1.62e-17 | 59 |
monocyte | 1.62e-17 | 59 |
monoblast | 1.62e-17 | 59 |
promonocyte | 1.62e-17 | 59 |
classical monocyte | 5.69e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.69e-16 | 42 |
granulocyte monocyte progenitor cell | 2.00e-14 | 67 |
myeloid leukocyte | 2.50e-13 | 72 |
myeloid lineage restricted progenitor cell | 8.08e-13 | 66 |
myeloid cell | 2.05e-08 | 108 |
common myeloid progenitor | 2.05e-08 | 108 |