FFCP PHASE1:Hg19::chr20:44462430..44462476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90203 | |EntrezGene=90203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16154 | |HGNC=16154 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JZH7,Q05DJ0,Q8WY78,Q969T3,Q5JZH5,Q8WUR6 | |UniProt=Q5JZH7,Q05DJ0,Q8WY78,Q969T3,Q5JZH5,Q8WUR6 | ||
|association_with_transcript=0bp_to_ENST00000462307,ENST00000466252,ENST00000472219,NM_001042632,NM_001042633,NM_033421,NM_152897,uc002xps.1,uc002xpt.1,uc002xpu.1,uc002xpv.1,uc002xpw.1_5end | |association_with_transcript=0bp_to_ENST00000462307,ENST00000466252,ENST00000472219,NM_001042632,NM_001042633,NM_033421,NM_152897,uc002xps.1,uc002xpt.1,uc002xpu.1,uc002xpv.1,uc002xpw.1_5end | ||
|cluster_id=chr20:44462430..44462476,+ | |||
|coexpression_cluster_id=C4043 | |||
|description=CAGE_peak_1_at_SNX21_5end | |description=CAGE_peak_1_at_SNX21_5end | ||
|id=chr20:44462430..44462476,+ | |id=chr20:44462430..44462476,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.80e-26!180;CL:0000057!1.14e-15!75;CL:0000183!1.41e-10!59;CL:0000136!5.98e-10!15;CL:0000680!9.34e-10!57;CL:0000056!9.34e-10!57;CL:0000355!9.34e-10!57;CL:0000187!3.75e-09!54;CL:0000192!3.86e-08!42;CL:0000514!3.86e-08!42;CL:0000393!1.40e-07!60;CL:0000211!1.40e-07!60;CL:0000222!1.63e-07!119;CL:0002620!2.04e-07!23 | |ontology_enrichment_celltype=CL:0000055!9.80e-26!180;CL:0000057!1.14e-15!75;CL:0000183!1.41e-10!59;CL:0000136!5.98e-10!15;CL:0000680!9.34e-10!57;CL:0000056!9.34e-10!57;CL:0000355!9.34e-10!57;CL:0000187!3.75e-09!54;CL:0000192!3.86e-08!42;CL:0000514!3.86e-08!42;CL:0000393!1.40e-07!60;CL:0000211!1.40e-07!60;CL:0000222!1.63e-07!119;CL:0002620!2.04e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.18e-09;13!CL:0002620;2.65e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.92e-16,76;CL:0000136,5.42e-10,15;CL:0000680,7.38e-10,58;CL:0000056,7.38e-10,58;CL:0000355,7.38e-10,58;CL:0000187,2.99e-09,55;CL:0000192,3.16e-08,43;CL:0000514,3.16e-08,43;CL:0000393,1.11e-07,61;CL:0000211,1.11e-07,61;CL:0002620,1.91e-07,23;CL:0000222,1.94e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.93e-28!365;UBERON:0000468!3.14e-19!659;UBERON:0000483!4.13e-17!309;UBERON:0000119!4.80e-17!312;UBERON:0000467!1.66e-15!625;UBERON:0000481!1.96e-15!347;UBERON:0000480!2.42e-15!626;UBERON:0002100!1.55e-14!216;UBERON:0004111!9.36e-14!241;UBERON:0000914!1.12e-12!83;UBERON:0002329!1.12e-12!83;UBERON:0003077!1.12e-12!83;UBERON:0003059!1.12e-12!83;UBERON:0007282!1.12e-12!83;UBERON:0009618!1.12e-12!83;UBERON:0007285!1.12e-12!83;UBERON:0004290!1.18e-12!70;UBERON:0000025!1.50e-12!194;UBERON:0005256!2.74e-12!143;UBERON:0000486!3.94e-12!82;UBERON:0000477!7.21e-12!286;UBERON:0002385!3.75e-11!63;UBERON:0001015!3.75e-11!63;UBERON:0000383!3.75e-11!63;UBERON:0002050!4.26e-11!605;UBERON:0005423!4.26e-11!605;UBERON:0000922!7.74e-11!612;UBERON:0000923!7.89e-11!604;UBERON:0005291!7.89e-11!604;UBERON:0006598!7.89e-11!604;UBERON:0002532!7.89e-11!604;UBERON:0001134!8.16e-11!61;UBERON:0002036!8.16e-11!61;UBERON:0003082!8.16e-11!61;UBERON:0000062!5.37e-09!511;UBERON:0007023!1.14e-08!115;UBERON:0002616!9.48e-08!59;UBERON:0003102!1.05e-07!95;UBERON:0001049!1.09e-07!57;UBERON:0005068!1.09e-07!57;UBERON:0006241!1.09e-07!57;UBERON:0007135!1.09e-07!57;UBERON:0000064!1.55e-07!219;UBERON:0000955!1.63e-07!69;UBERON:0006238!1.63e-07!69;UBERON:0003075!2.23e-07!86;UBERON:0007284!2.23e-07!86;UBERON:0004121!2.27e-07!169;UBERON:0000033!2.47e-07!123;UBERON:0003104!2.73e-07!238;UBERON:0009142!2.73e-07!238;UBERON:0003914!5.12e-07!118;UBERON:0005743!5.39e-07!86;UBERON:0001017!5.70e-07!82;UBERON:0004872!6.51e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@SNX21 | |short_description=p1@SNX21 | ||
}} | }} |
Latest revision as of 12:43, 16 September 2015
Short description: | p1@SNX21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNX21_5end |
Coexpression cluster: | C4043_Mesenchymal_Synoviocyte_Adipocyte_mature_tenocyte_Smooth_Multipotent |
Association with transcript: | 0bp_to_ENST00000462307, ENST00000466252, ENST00000472219, NM_001042632, NM_001042633, NM_033421, NM_152897, uc002xps.1, uc002xpt.1, uc002xpu.1, uc002xpv.1, uc002xpw.1_5end |
EntrezGene: | SNX21 |
HGNC: | 16154 |
UniProt: | Q5JZH7Q05DJ0Q8WY78Q969T3Q5JZH5Q8WUR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.92e-16 | 76 |
fat cell | 5.42e-10 | 15 |
muscle precursor cell | 7.38e-10 | 58 |
myoblast | 7.38e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.38e-10 | 58 |
muscle cell | 2.99e-09 | 55 |
smooth muscle cell | 3.16e-08 | 43 |
smooth muscle myoblast | 3.16e-08 | 43 |
electrically responsive cell | 1.11e-07 | 61 |
electrically active cell | 1.11e-07 | 61 |
skin fibroblast | 1.91e-07 | 23 |
mesodermal cell | 1.94e-07 | 121 |