FFCP PHASE1:Hg19::chrX:9733879..9733897,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4935 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20145 | |||
|TSSclassifier=strong | |||
|UniProt=P51810 | |||
|association_with_transcript=106bp_to_ENST00000467482_5end | |||
|cluster_id=chrX:9733879..9733897,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_1_at_GPR143_5end | |||
|id=chrX:9733879..9733897,- | |||
|ontology_enrichment_celltype=CL:0000147!4.86e-17!14;CL:0000148!2.59e-13!10;CL:0000541!2.59e-13!10;CL:1000449!2.48e-12!16;CL:1000507!5.71e-11!12;CL:1000494!5.71e-11!12;CL:1000497!2.01e-10!18;CL:0002518!2.01e-10!18;CL:0000075!8.49e-10!27;CL:0002681!1.89e-09!13;CL:0002584!1.89e-09!13;CL:0000710!9.11e-08!20;CL:0002543!1.92e-07!6;CL:0002322!2.53e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.01e-23;14!CL:0000148;2.12e-20;10!CL:1000449;1.25e-18;15!CL:1000507;1.47e-17;10!CL:1000494;1.47e-17;10!CL:1000497;5.31e-16;17!CL:0002518;5.31e-16;17!CL:0002681;5.51e-14;12!CL:0002584;5.51e-14;12!CL:0002543;6.48e-11;6!CL:0002322;8.34e-11;5!CL:0000075;4.12e-10;27!CL:0000149;4.81e-09;4!CL:0000710;8.31e-09;20!CL:0002567;2.31e-07;3!CL:0002586;4.01e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.03e-23,14;CL:0000148,2.15e-20,10;CL:0000541,2.15e-20,10;CL:1000449,1.72e-18,15;CL:1000507,1.98e-17,10;CL:1000494,1.98e-17,10;CL:1000497,6.97e-16,17;CL:0002518,6.97e-16,17;CL:0002681,7.69e-14,12;CL:0002584,7.69e-14,12;CL:0002543,5.42e-11,6;CL:0002322,8.40e-11,5;CL:0000075,4.17e-10,27;CL:0000149,4.83e-09,4;CL:0000710,8.35e-09,20;CL:0002567,2.32e-07,3;CL:0002586,4.02e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.43e-07;82 | |||
|ontology_enrichment_disease=DOID:2394!2.81e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.27e-26!86;UBERON:0001049!2.99e-25!57;UBERON:0005068!2.99e-25!57;UBERON:0006241!2.99e-25!57;UBERON:0007135!2.99e-25!57;UBERON:0003075!5.37e-25!86;UBERON:0007284!5.37e-25!86;UBERON:0002346!5.15e-23!90;UBERON:0001017!8.43e-23!82;UBERON:0002616!2.86e-22!59;UBERON:0000073!5.11e-22!94;UBERON:0001016!5.11e-22!94;UBERON:0007023!1.32e-21!115;UBERON:0000955!6.75e-20!69;UBERON:0006238!6.75e-20!69;UBERON:0003056!8.70e-20!61;UBERON:0000025!1.20e-19!194;UBERON:0002780!1.86e-18!41;UBERON:0001890!1.86e-18!41;UBERON:0006240!1.86e-18!41;UBERON:0003080!9.21e-18!42;UBERON:0001893!6.97e-17!34;UBERON:0002020!7.40e-17!34;UBERON:0003528!7.40e-17!34;UBERON:0000483!8.10e-17!309;UBERON:0000153!1.10e-16!129;UBERON:0007811!1.10e-16!129;UBERON:0000119!2.50e-16!312;UBERON:0002791!3.85e-16!33;UBERON:0000033!1.12e-15!123;UBERON:0001869!1.67e-15!32;UBERON:0004121!6.63e-15!169;UBERON:0004111!6.76e-15!241;UBERON:0000924!4.72e-14!173;UBERON:0006601!4.72e-14!173;UBERON:0000477!4.88e-13!286;UBERON:0006555!7.29e-13!17;UBERON:0005103!7.29e-13!17;UBERON:0000083!7.29e-13!17;UBERON:0009201!7.29e-13!17;UBERON:0004819!7.29e-13!17;UBERON:0006553!7.29e-13!17;UBERON:0003074!7.29e-13!17;UBERON:0003060!7.29e-13!17;UBERON:0002619!1.20e-12!22;UBERON:0004211!2.48e-12!16;UBERON:0001285!2.48e-12!16;UBERON:0007684!2.48e-12!16;UBERON:0003220!2.48e-12!16;UBERON:0004208!2.48e-12!16;UBERON:0000080!7.41e-12!18;UBERON:0002120!7.41e-12!18;UBERON:0004875!7.41e-12!18;UBERON:0005721!7.41e-12!18;UBERON:0005754!7.41e-12!18;UBERON:0007297!7.41e-12!18;UBERON:0004876!1.70e-11!20;UBERON:0009773!5.71e-11!12;UBERON:0001231!5.71e-11!12;UBERON:0004810!5.71e-11!12;UBERON:0001950!6.82e-11!20;UBERON:0000353!1.46e-10!17;UBERON:0000956!1.81e-10!25;UBERON:0000203!1.81e-10!25;UBERON:0000064!6.13e-10!219;UBERON:0000922!1.10e-09!612;UBERON:0001225!1.89e-09!13;UBERON:0008987!1.89e-09!13;UBERON:0003887!1.94e-09!21;UBERON:0000489!2.66e-09!32;UBERON:0003076!9.87e-09!15;UBERON:0003057!9.87e-09!15;UBERON:0002420!1.18e-08!9;UBERON:0007245!1.18e-08!9;UBERON:0010009!1.18e-08!9;UBERON:0010011!1.18e-08!9;UBERON:0000454!1.18e-08!9;UBERON:0002113!1.63e-08!27;UBERON:0003918!1.63e-08!27;UBERON:0005095!1.63e-08!27;UBERON:0007687!1.63e-08!27;UBERON:0002308!2.02e-08!9;UBERON:0000125!2.02e-08!9;UBERON:0003886!2.03e-08!63;UBERON:0000468!8.81e-08!659;UBERON:0000475!1.93e-07!365;UBERON:0000991!2.30e-07!21;UBERON:0009196!2.30e-07!21;UBERON:0009117!2.30e-07!21;UBERON:0005564!2.30e-07!21;UBERON:0002553!2.91e-07!70;UBERON:0000923!4.49e-07!604;UBERON:0005291!4.49e-07!604;UBERON:0006598!4.49e-07!604;UBERON:0002532!4.49e-07!604;UBERON:0001851!4.83e-07!16;UBERON:0002050!5.38e-07!605;UBERON:0005423!5.38e-07!605;UBERON:0009663!6.88e-07!7;UBERON:0001638!6.94e-07!9;UBERON:0003920!6.94e-07!9;UBERON:0004582!6.94e-07!9;UBERON:0004176!7.59e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.75e-20;32!UBERON:0001893;7.60e-20;34!UBERON:0003528;8.20e-20;34!UBERON:0002020;8.20e-20;34!UBERON:0006555;1.25e-18;15!UBERON:0004819;1.25e-18;15!UBERON:0001285;1.25e-18;15!UBERON:0007684;1.25e-18;15!UBERON:0002619;1.39e-18;22!UBERON:0002791;1.93e-18;32!UBERON:0004211;1.47e-17;10!UBERON:0009773;1.47e-17;10!UBERON:0001231;1.47e-17;10!UBERON:0004810;1.47e-17;10!UBERON:0000956;7.21e-16;25!UBERON:0000203;7.21e-16;25!UBERON:0001950;8.89e-16;20!UBERON:0000353;3.26e-15;15!UBERON:0002780;2.83e-14;41!UBERON:0001890;2.83e-14;41!UBERON:0000073;3.56e-14;53!UBERON:0002616;3.56e-14;53!UBERON:0001225;5.51e-14;12!UBERON:0008987;5.51e-14;12!UBERON:0000489;7.37e-14;29!UBERON:0002113;9.41e-14;24!UBERON:0011143;9.41e-14;24!UBERON:0000955;2.08e-11;68!UBERON:0001851;1.08e-10;15!UBERON:0006554;3.49e-10;30!UBERON:0001008;3.49e-10;30!UBERON:0001017;5.44e-10;75!UBERON:0002298;1.44e-09;6!UBERON:0000200;6.92e-09;6!UBERON:0000349;7.97e-09;5!UBERON:0002420;3.49e-08;9!UBERON:0007245;3.49e-08;9!UBERON:0010009;3.49e-08;9!UBERON:0010011;3.49e-08;9!UBERON:0000454;3.49e-08;9!UBERON:0000125;4.25e-08;9!UBERON:0002308;4.25e-08;9!UBERON:0004733;1.89e-07;12!UBERON:0002028;1.89e-07;12!UBERON:0001781;4.01e-07;3!UBERON:0001782;4.01e-07;3!UBERON:0000966;4.51e-07;5!UBERON:0005388;4.51e-07;5!UBERON:0001802;4.51e-07;5!UBERON:0001016;4.87e-07;83!UBERON:0000369;5.35e-07;4!UBERON:0002435;5.35e-07;4!UBERON:0000204;5.35e-07;4!UBERON:0001638;5.77e-07;9!UBERON:0003920;5.77e-07;9!UBERON:0004582;5.77e-07;9!UBERON:0004732;9.03e-07;13 | |||
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| |||
|short_description=p1@GPR143 | |||
}} |
Latest revision as of 15:22, 16 September 2015
Short description: | p1@GPR143 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR143_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 106bp_to_ENST00000467482_5end |
EntrezGene: | GPR143 |
HGNC: | 20145 |
UniProt: | P51810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.03e-23 | 14 |
melanocyte | 2.15e-20 | 10 |
melanoblast | 2.15e-20 | 10 |
epithelial cell of nephron | 1.72e-18 | 15 |
kidney tubule cell | 1.98e-17 | 10 |
nephron tubule epithelial cell | 1.98e-17 | 10 |
kidney cell | 6.97e-16 | 17 |
kidney epithelial cell | 6.97e-16 | 17 |
kidney cortical cell | 7.69e-14 | 12 |
renal cortical epithelial cell | 7.69e-14 | 12 |
vein endothelial cell | 5.42e-11 | 6 |
embryonic stem cell | 8.40e-11 | 5 |
columnar/cuboidal epithelial cell | 4.17e-10 | 27 |
visual pigment cell | 4.83e-09 | 4 |
neurecto-epithelial cell | 8.35e-09 | 20 |
light melanocyte | 2.32e-07 | 3 |
retinal pigment epithelial cell | 4.02e-07 | 3 |