FFCP PHASE1:Hg19::chr5:161277768..161277782,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:161277768..161277782,+ to FFCP PHASE1:Hg19::chr5:161277768..161277782,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2554 | |EntrezGene=2554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4075 | |HGNC=4075 | ||
|TSSclassifier=strong | |||
|UniProt=P14867 | |UniProt=P14867 | ||
|association_with_transcript=65bp_to_NM_001127648,uc010jjb.2_5end | |||
|cluster_id=chr5:161277768..161277782,+ | |||
|coexpression_cluster_id=C729 | |||
|description=CAGE_peak_8_at_GABRA1_5end | |||
|id=chr5:161277768..161277782,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.25e-21;3!UBERON:0006601;2.93e-19;82!UBERON:0006222;9.79e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.39e-84!57;UBERON:0005068!1.39e-84!57;UBERON:0006241!1.39e-84!57;UBERON:0007135!1.39e-84!57;UBERON:0002616!7.66e-77!59;UBERON:0000955!8.26e-72!69;UBERON:0006238!8.26e-72!69;UBERON:0001017!3.37e-70!82;UBERON:0005743!3.76e-70!86;UBERON:0000073!4.08e-66!94;UBERON:0001016!4.08e-66!94;UBERON:0003075!1.19e-63!86;UBERON:0007284!1.19e-63!86;UBERON:0002619!5.04e-61!22;UBERON:0002780!5.41e-61!41;UBERON:0001890!5.41e-61!41;UBERON:0006240!5.41e-61!41;UBERON:0002346!1.80e-60!90;UBERON:0003080!2.01e-59!42;UBERON:0002020!1.56e-57!34;UBERON:0003528!1.56e-57!34;UBERON:0001893!1.65e-57!34;UBERON:0007023!2.24e-57!115;UBERON:0001869!5.73e-56!32;UBERON:0001950!4.61e-54!20;UBERON:0002791!5.51e-54!33;UBERON:0000956!1.98e-53!25;UBERON:0000203!1.98e-53!25;UBERON:0003056!2.17e-42!61;UBERON:0000033!7.79e-42!123;UBERON:0000153!1.62e-39!129;UBERON:0007811!1.62e-39!129;UBERON:0004121!2.52e-33!169;UBERON:0000924!2.32e-32!173;UBERON:0006601!2.32e-32!173;UBERON:0004733!6.44e-26!12;UBERON:0002028!6.44e-26!12;UBERON:0007277!6.44e-26!12;UBERON:0000200!3.30e-25!6;UBERON:0003076!3.99e-25!15;UBERON:0003057!3.99e-25!15;UBERON:0004732!8.48e-24!13;UBERON:0000025!4.66e-22!194;UBERON:0000349!8.18e-20!5;UBERON:0001871!3.44e-18!7;UBERON:0002298!2.46e-17!8;UBERON:0002680!2.84e-16!9;UBERON:0001895!2.84e-16!9;UBERON:0010092!2.84e-16!9;UBERON:0004111!4.25e-16!241;UBERON:0001872!5.81e-14!5;UBERON:0002021!8.34e-14!5;UBERON:0000483!2.22e-13!309;UBERON:0002771!2.65e-13!3;UBERON:0000477!3.25e-13!286;UBERON:0000119!3.63e-13!312;UBERON:0000988!6.28e-13!3;UBERON:0001896!3.97e-12!3;UBERON:0005290!3.97e-12!3;UBERON:0010096!3.97e-12!3;UBERON:0000064!1.11e-11!219;UBERON:0000475!5.62e-10!365;UBERON:0001870!7.79e-10!2;UBERON:0002148!1.97e-09!2;UBERON:0009662!1.97e-09!2;UBERON:0001876!3.53e-09!2;UBERON:0001897!3.67e-09!2;UBERON:0002360!6.24e-09!2;UBERON:0000094!6.24e-09!2;UBERON:0007645!6.24e-09!2;UBERON:0001954!1.09e-08!2;UBERON:0003022!1.09e-08!2;UBERON:0002421!1.09e-08!2;UBERON:0002600!1.09e-08!2;UBERON:0002308!1.31e-07!9;UBERON:0000125!1.31e-07!9;UBERON:0002420!1.67e-07!9;UBERON:0007245!1.67e-07!9;UBERON:0010009!1.67e-07!9;UBERON:0010011!1.67e-07!9;UBERON:0000454!1.67e-07!9;UBERON:0000062!2.15e-07!511;UBERON:0002037!5.62e-07!6;UBERON:0006215!5.62e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.02e-71;20!UBERON:0002619;1.07e-64;22!UBERON:0001893;3.11e-60;34!UBERON:0003528;4.49e-58;34!UBERON:0002020;4.49e-58;34!UBERON:0001869;1.85e-57;32!UBERON:0000956;6.56e-57;25!UBERON:0000203;6.56e-57;25!UBERON:0002791;1.97e-50;32!UBERON:0002780;2.53e-45;41!UBERON:0001890;2.53e-45;41!UBERON:0000073;1.70e-42;53!UBERON:0002616;1.70e-42;53!UBERON:0000200;3.58e-41;6!UBERON:0000955;3.67e-31;68!UBERON:0001017;7.62e-27;75!UBERON:0001872;1.89e-22;5!UBERON:0001016;2.06e-22;83!UBERON:0001870;8.83e-22;3!UBERON:0002680;4.03e-19;9!UBERON:0001895;4.03e-19;9!UBERON:0001871;5.74e-16;6!UBERON:0002702;4.16e-15;2!UBERON:0002771;9.01e-15;2!UBERON:0007023;1.08e-14;114!UBERON:0002148;1.19e-14;2!UBERON:0006331;1.19e-14;2!UBERON:0009662;1.19e-14;2!UBERON:0004733;2.63e-14;12!UBERON:0002028;2.63e-14;12!UBERON:0004732;3.41e-13;13!UBERON:0002021;3.43e-13;5!UBERON:0000125;2.34e-12;9!UBERON:0002308;2.34e-12;9!UBERON:0002037;4.28e-11;6!UBERON:0000988;4.51e-10;3!UBERON:0011216;1.88e-09;132!UBERON:0007190;2.02e-08;1!UBERON:0002581;3.57e-08;1!UBERON:0002902;3.57e-08;1!UBERON:0002022;3.57e-08;1!UBERON:0003112;3.57e-08;1!UBERON:0011158;3.57e-08;1!UBERON:0009899;3.57e-08;1!UBERON:0003128;3.57e-08;1!UBERON:0001703;3.57e-08;1!UBERON:0002241;3.57e-08;1!UBERON:0001882;6.24e-08;1!UBERON:0002336;6.24e-08;1!UBERON:0011215;6.24e-08;1!UBERON:0001018;6.24e-08;1!UBERON:0002473;6.24e-08;1!UBERON:0005340;6.24e-08;1!UBERON:0003544;6.24e-08;1!UBERON:0005970;6.24e-08;1!UBERON:0002316;6.24e-08;1!UBERON:0001020;6.24e-08;1!UBERON:0005403;6.24e-08;1!UBERON:0002437;6.24e-08;1!UBERON:0002420;1.71e-07;9!UBERON:0007245;1.71e-07;9!UBERON:0010009;1.71e-07;9!UBERON:0010011;1.71e-07;9!UBERON:0000454;1.71e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.61e-82,53;UBERON:0002616,4.61e-82,53;UBERON:0001049,1.61e-77,56;UBERON:0005068,1.61e-77,56;UBERON:0006241,1.61e-77,56;UBERON:0007135,1.61e-77,56;UBERON:0001950,4.24e-71,20;UBERON:0002780,1.20e-68,41;UBERON:0001890,1.20e-68,41;UBERON:0003080,1.20e-68,41;UBERON:0006240,1.20e-68,41;UBERON:0000955,1.75e-67,68;UBERON:0006238,1.75e-67,68;UBERON:0003528,2.88e-67,34;UBERON:0002020,2.88e-67,34;UBERON:0001893,3.11e-67,34;UBERON:0002619,1.12e-64,22;UBERON:0001869,3.53e-64,32;UBERON:0001017,8.89e-61,81;UBERON:0002791,5.22e-57,32;UBERON:0000956,6.85e-57,25;UBERON:0000203,6.85e-57,25;UBERON:0001016,2.11e-54,89;UBERON:0003075,6.91e-52,82;UBERON:0007284,6.91e-52,82;UBERON:0002346,2.66e-49,86;UBERON:0003056,2.95e-45,61;UBERON:0007023,4.40e-43,114;UBERON:0000200,4.42e-41,6;UBERON:0010371,4.26e-40,104;UBERON:0010314,2.05e-33,132;UBERON:0004121,1.23e-26,171;UBERON:0000924,1.23e-26,171;UBERON:0006601,1.23e-26,171;UBERON:0001872,1.70e-22,5;UBERON:0001870,1.17e-21,3;UBERON:0011216,4.70e-21,223;UBERON:0000025,9.28e-20,192;UBERON:0002680,4.19e-19,9;UBERON:0001895,4.19e-19,9;UBERON:0010092,4.19e-19,9;UBERON:0001871,4.91e-16,6;UBERON:0002702,5.52e-15,2;UBERON:0004111,6.68e-15,240;UBERON:0002771,7.84e-15,2;UBERON:0002148,1.11e-14,2;UBERON:0006331,1.11e-14,2;UBERON:0009662,1.11e-14,2;UBERON:0004733,2.70e-14,12;UBERON:0002028,2.70e-14,12;UBERON:0007277,2.70e-14,12;UBERON:0002021,3.16e-13,5;UBERON:0004732,3.50e-13,13;UBERON:0000125,2.56e-12,9;UBERON:0002308,2.56e-12,9;UBERON:0003076,2.12e-11,15;UBERON:0003057,2.12e-11,15;UBERON:0002037,4.59e-11,6;UBERON:0006215,4.59e-11,6;UBERON:0000483,1.10e-10,306;UBERON:0000119,1.55e-10,309;UBERON:0000988,4.31e-10,3;UBERON:0007190,2.17e-08,1;UBERON:0003112,3.33e-08,1;UBERON:0011158,3.33e-08,1;UBERON:0003128,3.33e-08,1;UBERON:0001703,3.33e-08,1;UBERON:0002241,3.33e-08,1;UBERON:0004761,3.33e-08,1;UBERON:0009617,3.33e-08,1;UBERON:0002581,3.57e-08,1;UBERON:0002902,4.41e-08,1;UBERON:0009899,4.41e-08,1;UBERON:0002022,5.07e-08,1;UBERON:0002336,6.24e-08,1;UBERON:0011215,6.24e-08,1;UBERON:0001018,6.24e-08,1;UBERON:0002473,6.24e-08,1;UBERON:0005340,6.24e-08,1;UBERON:0003544,6.24e-08,1;UBERON:0005970,6.24e-08,1;UBERON:0002316,6.24e-08,1;UBERON:0001020,6.24e-08,1;UBERON:0002437,6.24e-08,1;UBERON:0001882,7.16e-08,1;UBERON:0005403,7.16e-08,1;UBERON:0002420,1.83e-07,9;UBERON:0007245,1.83e-07,9;UBERON:0010009,1.83e-07,9;UBERON:0010011,1.83e-07,9;UBERON:0000454,1.83e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,2.59750674853184,0,0,0,0,0,0,0,0,0,0,0,0,6.10326945268333,1.54810963903714,4.43321428430321,2.85201016300164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61762719153625,0,31.1571712814701,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,3.41878298161745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,2.06548492637284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71494208359256,2.38018683136842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,4.51497180137264,2.1282458220105,0.573409195690071,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,1.54150140231503,19.8375206855819,0.798169295285756,2.87162909937057,0,2.35134658378341,2.58361033010962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24180406168294,3.90539049306924,3.9270491335225,2.53663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,2.56513816895111,0,0,0,0,0,0,0,0,0.142953088353313,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63179576458195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0958804707992,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,2.59750674853184,0,0,0,0,0,0,0,0,0,0,0,0,6.10326945268333,1.54810963903714,4.43321428430321,2.85201016300164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61762719153625,0,31.1571712814701,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,3.41878298161745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,2.06548492637284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71494208359256,2.38018683136842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,4.51497180137264,2.1282458220105,0.573409195690071,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,1.54150140231503,19.8375206855819,0.798169295285756,2.87162909937057,0,2.35134658378341,2.58361033010962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24180406168294,3.90539049306924,3.9270491335225,2.53663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,2.56513816895111,0,0,0,0,0,0,0,0,0.142953088353313,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63179576458195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0958804707992,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@GABRA1 | |||
}} | }} |
Latest revision as of 17:26, 16 September 2015
Short description: | p8@GABRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GABRA1_5end |
Coexpression cluster: | C729_diencephalon_corpus_thalamus_occipital_brain_medulla_frontal |
Association with transcript: | 65bp_to_NM_001127648, uc010jjb.2_5end |
EntrezGene: | GABRA1 |
HGNC: | 4075 |
UniProt: | P14867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data