FFCP PHASE1:Hg19::chr1:242687989..242688004,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200150 | |EntrezGene=200150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26879 | |HGNC=26879 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N7P1 | |UniProt=Q8N7P1 | ||
|association_with_transcript=0bp_to_ENST00000366545,ENST00000442594,NM_152666,uc001hzo.1_5end | |association_with_transcript=0bp_to_ENST00000366545,ENST00000442594,NM_152666,uc001hzo.1_5end | ||
|cluster_id=chr1:242687989..242688004,- | |||
|description=CAGE_peak_1_at_PLD5_5end | |description=CAGE_peak_1_at_PLD5_5end | ||
|id=chr1:242687989..242688004,- | |id=chr1:242687989..242688004,- | ||
|ontology_enrichment_celltype=CL:0002159!3.27e-08!13 | |ontology_enrichment_celltype=CL:0002159!3.27e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002159;5.66e-10;14!CL:0000240;3.30e-08;6!CL:0000311;3.30e-08;6!CL:0000079;3.30e-08;6!CL:0000237;3.30e-08;6!CL:0000312;2.78e-07;5!CL:0000333;8.64e-07;5 | |ontology_enrichment_celltype_v019=CL:0002159;5.66e-10;14!CL:0000240;3.30e-08;6!CL:0000311;3.30e-08;6!CL:0000079;3.30e-08;6!CL:0000237;3.30e-08;6!CL:0000312;2.78e-07;5!CL:0000333;8.64e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,4.81e-10,14;CL:0000240,3.55e-08,6;CL:0000311,3.55e-08,6;CL:0000079,3.55e-08,6;CL:0000237,3.55e-08,6;CL:0000036,3.55e-08,6;CL:0000357,3.55e-08,6;CL:0000114,3.55e-08,6;CL:0000312,2.85e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.85e-09;82!CL:0000357;3.30e-08;6!CL:0000114;3.30e-08;6 | |ontology_enrichment_development_v019=UBERON:0006601;3.85e-09;82!CL:0000357;3.30e-08;6!CL:0000114;3.30e-08;6 | ||
|ontology_enrichment_disease=DOID:171!6.13e-07!10 | |ontology_enrichment_disease=DOID:171!6.13e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;3.22e-07;10 | |ontology_enrichment_disease_v019=DOID:171;3.22e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,3.33e-07,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;8.33e-21;34!UBERON:0002020;8.33e-21;34!UBERON:0001893;2.35e-20;34!UBERON:0002791;5.43e-20;32!UBERON:0001869;7.83e-20;32!UBERON:0000956;4.21e-17;25!UBERON:0000203;4.21e-17;25!UBERON:0002780;4.42e-17;41!UBERON:0001890;4.42e-17;41!UBERON:0000073;8.41e-17;53!UBERON:0002616;8.41e-17;53!UBERON:0002619;1.28e-15;22!UBERON:0001950;7.77e-14;20!UBERON:0001017;4.92e-10;75!UBERON:0001016;9.87e-10;83!UBERON:0000955;1.08e-09;68!UBERON:0000125;8.74e-09;9!UBERON:0002308;8.74e-09;9!UBERON:0002420;1.87e-08;9!UBERON:0007245;1.87e-08;9!UBERON:0010009;1.87e-08;9!UBERON:0010011;1.87e-08;9!UBERON:0000454;1.87e-08;9!UBERON:0002298;1.37e-07;6!UBERON:0000013;8.64e-07;5!UBERON:0002410;8.64e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0003528;8.33e-21;34!UBERON:0002020;8.33e-21;34!UBERON:0001893;2.35e-20;34!UBERON:0002791;5.43e-20;32!UBERON:0001869;7.83e-20;32!UBERON:0000956;4.21e-17;25!UBERON:0000203;4.21e-17;25!UBERON:0002780;4.42e-17;41!UBERON:0001890;4.42e-17;41!UBERON:0000073;8.41e-17;53!UBERON:0002616;8.41e-17;53!UBERON:0002619;1.28e-15;22!UBERON:0001950;7.77e-14;20!UBERON:0001017;4.92e-10;75!UBERON:0001016;9.87e-10;83!UBERON:0000955;1.08e-09;68!UBERON:0000125;8.74e-09;9!UBERON:0002308;8.74e-09;9!UBERON:0002420;1.87e-08;9!UBERON:0007245;1.87e-08;9!UBERON:0010009;1.87e-08;9!UBERON:0010011;1.87e-08;9!UBERON:0000454;1.87e-08;9!UBERON:0002298;1.37e-07;6!UBERON:0000013;8.64e-07;5!UBERON:0002410;8.64e-07;5 | ||
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| ||
|short_description=p1@PLD5 | |short_description=p1@PLD5 | ||
}} | }} |
Latest revision as of 18:59, 16 September 2015
Short description: | p1@PLD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000366545, ENST00000442594, NM_152666, uc001hzo.1_5end |
EntrezGene: | PLD5 |
HGNC: | 26879 |
UniProt: | Q8N7P1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 4.81e-10 | 14 |
stratified squamous epithelial cell | 3.55e-08 | 6 |
keratin accumulating cell | 3.55e-08 | 6 |
stratified epithelial cell | 3.55e-08 | 6 |
keratinizing barrier epithelial cell | 3.55e-08 | 6 |
epithelial fate stem cell | 3.55e-08 | 6 |
stratified epithelial stem cell | 3.55e-08 | 6 |
surface ectodermal cell | 3.55e-08 | 6 |
keratinocyte | 2.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.33e-07 | 10 |