FFCP PHASE1:Hg19::chr11:1463687..1463709,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9024 | |EntrezGene=9024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11405 | |HGNC=11405 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_uc010qwx.1_5end | |association_with_transcript=-10bp_to_uc010qwx.1_5end | ||
|cluster_id=chr11:1463687..1463709,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_8_at_BRSK2_5end | |description=CAGE_peak_8_at_BRSK2_5end | ||
|id=chr11:1463687..1463709,+ | |id=chr11:1463687..1463709,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000306;8.85e-07;4!CL:0002222;8.85e-07;4!CL:0002224;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,9.11e-07,4;CL:0002222,9.11e-07,4;CL:0002224,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.00e-67;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.96e-45!90;UBERON:0003075!9.94e-45!86;UBERON:0007284!9.94e-45!86;UBERON:0001049!7.08e-43!57;UBERON:0005068!7.08e-43!57;UBERON:0006241!7.08e-43!57;UBERON:0007135!7.08e-43!57;UBERON:0005743!1.71e-41!86;UBERON:0001017!1.85e-41!82;UBERON:0000073!9.69e-37!94;UBERON:0001016!9.69e-37!94;UBERON:0002616!1.98e-35!59;UBERON:0000955!1.20e-33!69;UBERON:0006238!1.20e-33!69;UBERON:0000924!1.11e-26!173;UBERON:0006601!1.11e-26!173;UBERON:0004121!4.50e-26!169;UBERON:0003076!2.70e-25!15;UBERON:0003057!2.70e-25!15;UBERON:0000033!1.90e-24!123;UBERON:0007023!9.64e-24!115;UBERON:0000153!6.67e-23!129;UBERON:0007811!6.67e-23!129;UBERON:0002780!1.61e-22!41;UBERON:0001890!1.61e-22!41;UBERON:0006240!1.61e-22!41;UBERON:0004733!6.69e-22!12;UBERON:0002028!6.69e-22!12;UBERON:0007277!6.69e-22!12;UBERON:0003080!6.99e-22!42;UBERON:0003056!3.13e-21!61;UBERON:0004732!4.52e-20!13;UBERON:0002680!5.14e-18!9;UBERON:0001895!5.14e-18!9;UBERON:0010092!5.14e-18!9;UBERON:0002020!7.42e-17!34;UBERON:0003528!7.42e-17!34;UBERON:0001893!1.19e-16!34;UBERON:0001869!2.21e-15!32;UBERON:0002791!6.18e-15!33;UBERON:0000025!2.18e-13!194;UBERON:0001950!4.70e-13!20;UBERON:0000956!2.28e-12!25;UBERON:0000203!2.28e-12!25;UBERON:0002619!9.61e-12!22;UBERON:0000988!4.40e-11!3;UBERON:0002298!9.69e-11!8;UBERON:0003978!1.22e-10!3;UBERON:0009751!1.22e-10!3;UBERON:0000946!1.22e-10!3;UBERON:0002523!1.22e-10!3;UBERON:0005983!1.22e-10!3;UBERON:0002165!1.22e-10!3;UBERON:0002062!1.22e-10!3;UBERON:0007280!1.22e-10!3;UBERON:0004111!8.66e-10!241;UBERON:0000477!1.57e-09!286;UBERON:0002037!2.01e-09!6;UBERON:0006215!2.01e-09!6;UBERON:0000483!7.23e-09!309;UBERON:0000119!1.09e-08!312;UBERON:0000200!1.25e-08!6;UBERON:0000064!1.77e-08!219;UBERON:0002133!6.62e-08!2;UBERON:0002148!8.09e-08!2;UBERON:0009662!8.09e-08!2;UBERON:0001905!8.64e-08!2;UBERON:0002757!8.64e-08!2;UBERON:0010134!8.64e-08!2;UBERON:0002784!8.64e-08!2;UBERON:0005408!8.64e-08!2;UBERON:0001899!8.64e-08!2;UBERON:0001894!8.84e-08!7;UBERON:0006222!8.84e-08!7;UBERON:0000922!3.51e-07!612;UBERON:0000481!8.80e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;5.15e-46;12!UBERON:0002028;5.15e-46;12!UBERON:0004732;1.64e-42;13!UBERON:0002680;1.15e-39;9!UBERON:0001895;1.15e-39;9!UBERON:0002037;5.37e-34;6!UBERON:0002298;1.41e-15;6!UBERON:0001905;2.74e-12;2!UBERON:0002757;2.74e-12;2!UBERON:0010134;2.74e-12;2!UBERON:0005408;2.74e-12;2!UBERON:0001899;2.74e-12;2!UBERON:0000955;1.80e-11;68!UBERON:0000073;1.61e-10;53!UBERON:0002616;1.61e-10;53!UBERON:0000988;1.26e-08;3!UBERON:0001896;1.26e-08;3!UBERON:0002114;1.26e-08;2!UBERON:0005290;1.26e-08;3!UBERON:0001016;3.78e-08;83!UBERON:0001017;4.23e-07;75!UBERON:0003296;8.85e-07;4!UBERON:0010133;8.85e-07;4!UBERON:0010077;8.85e-07;4!UBERON:0005389;8.85e-07;4!UBERON:0000484;8.85e-07;4!UBERON:0002784;8.85e-07;4!UBERON:0000965;8.85e-07;4!UBERON:0001803;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,4.28e-46,12;UBERON:0002028,4.28e-46,12;UBERON:0007277,4.28e-46,12;UBERON:0004732,1.38e-42,13;UBERON:0002680,1.09e-39,9;UBERON:0001895,1.09e-39,9;UBERON:0010092,1.09e-39,9;UBERON:0003076,5.74e-37,15;UBERON:0003057,5.74e-37,15;UBERON:0002037,5.37e-34,6;UBERON:0006215,5.37e-34,6;UBERON:0002298,1.22e-15,6;UBERON:0000955,2.31e-15,68;UBERON:0006238,2.31e-15,68;UBERON:0000073,9.38e-15,53;UBERON:0002616,9.38e-15,53;UBERON:0001049,5.58e-14,56;UBERON:0005068,5.58e-14,56;UBERON:0006241,5.58e-14,56;UBERON:0007135,5.58e-14,56;UBERON:0001017,6.09e-13,81;UBERON:0003075,6.44e-13,82;UBERON:0007284,6.44e-13,82;UBERON:0002346,2.56e-12,86;UBERON:0001905,3.24e-12,2;UBERON:0002757,3.24e-12,2;UBERON:0010134,3.24e-12,2;UBERON:0005408,3.24e-12,2;UBERON:0001899,3.24e-12,2;UBERON:0001016,1.16e-11,89;UBERON:0010371,3.51e-10,104;UBERON:0001896,1.12e-08,3;UBERON:0005290,1.12e-08,3;UBERON:0010096,1.12e-08,3;UBERON:0000988,1.21e-08,3;UBERON:0002114,1.51e-08,2;UBERON:0010314,5.40e-08,132;UBERON:0004121,6.76e-08,171;UBERON:0000924,6.76e-08,171;UBERON:0006601,6.76e-08,171;UBERON:0007023,5.78e-07,114;UBERON:0010077,9.11e-07,4;UBERON:0005389,9.11e-07,4;UBERON:0000484,9.11e-07,4;UBERON:0002546,9.11e-07,4;UBERON:0000965,9.11e-07,4;UBERON:0001803,9.11e-07,4;UBERON:0003073,9.11e-07,4;UBERON:0005426,9.11e-07,4;UBERON:0003296,9.63e-07,4;UBERON:0010133,9.63e-07,4;UBERON:0002784,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.361789315876224,27.464712537075,21.3417971667264,15.3684761855845,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.404406797884062,0,0.702793337176017,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.677942222341597,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,1.66393577305278,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,1.2914249265598,0.328863867814245,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.135982980381829,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.361789315876224,27.464712537075,21.3417971667264,15.3684761855845,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.404406797884062,0,0.702793337176017,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.677942222341597,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,1.66393577305278,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,1.2914249265598,0.328863867814245,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.135982980381829,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p8@BRSK2 | |short_description=p8@BRSK2 | ||
}} | }} |
Latest revision as of 21:47, 16 September 2015
Short description: | p8@BRSK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BRSK2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -10bp_to_uc010qwx.1_5end |
EntrezGene: | BRSK2 |
HGNC: | 11405 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 9.11e-07 | 4 |
vertebrate lens cell | 9.11e-07 | 4 |
lens epithelial cell | 9.11e-07 | 4 |