FFCP PHASE1:Hg19::chr5:169931009..169931065,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30820 | |EntrezGene=30820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15521 | |HGNC=15521 | ||
|TSSclassifier=strong | |||
|UniProt=Q3YAD2,Q3YAD1,Q9NZI2 | |UniProt=Q3YAD2,Q3YAD1,Q9NZI2 | ||
|association_with_transcript=0bp_to_ENST00000328939,ENST00000390656,NM_001034837,NM_014592,uc003mas.2,uc003mat.2,uc010jjp.2,uc010jjq.2_5end | |association_with_transcript=0bp_to_ENST00000328939,ENST00000390656,NM_001034837,NM_014592,uc003mas.2,uc003mat.2,uc010jjp.2,uc010jjq.2_5end | ||
|cluster_id=chr5:169931009..169931065,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_KCNIP1_5end | |description=CAGE_peak_1_at_KCNIP1_5end | ||
|id=chr5:169931009..169931065,+ | |id=chr5:169931009..169931065,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.31e-09!25;CL:1000449!4.71e-09!16;CL:1000497!6.19e-09!18;CL:0002518!6.19e-09!18;CL:1000507!2.31e-08!12;CL:1000494!2.31e-08!12;CL:0000128!1.28e-07!7;CL:0000126!1.28e-07!7;CL:0000127!1.28e-07!7;CL:0002453!1.28e-07!7;CL:0000133!2.44e-07!59;CL:0002681!8.25e-07!13;CL:0002584!8.25e-07!13 | |ontology_enrichment_celltype=CL:0002319!1.31e-09!25;CL:1000449!4.71e-09!16;CL:1000497!6.19e-09!18;CL:0002518!6.19e-09!18;CL:1000507!2.31e-08!12;CL:1000494!2.31e-08!12;CL:0000128!1.28e-07!7;CL:0000126!1.28e-07!7;CL:0000127!1.28e-07!7;CL:0002453!1.28e-07!7;CL:0000133!2.44e-07!59;CL:0002681!8.25e-07!13;CL:0002584!8.25e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.67e-12;10!CL:1000494;3.67e-12;10!CL:0000128;1.09e-11;7!CL:0000126;1.09e-11;7!CL:0000127;1.09e-11;7!CL:1000497;5.47e-11;17!CL:0002518;5.47e-11;17!CL:1000449;9.84e-11;15!CL:0002681;2.84e-07;12!CL:0002584;2.84e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.93e-12,10;CL:1000494,2.93e-12,10;CL:0000128,1.15e-11,7;CL:0000126,1.15e-11,7;CL:0000127,1.15e-11,7;CL:0002453,1.15e-11,7;CL:1000497,5.09e-11,17;CL:0002518,5.09e-11,17;CL:1000449,8.92e-11,15;CL:0002681,2.78e-07,12;CL:0002584,2.78e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.45e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.10e-58!86;UBERON:0001017!9.16e-58!82;UBERON:0000073!1.54e-55!94;UBERON:0001016!1.54e-55!94;UBERON:0001049!4.84e-49!57;UBERON:0005068!4.84e-49!57;UBERON:0006241!4.84e-49!57;UBERON:0007135!4.84e-49!57;UBERON:0000955!9.81e-49!69;UBERON:0006238!9.81e-49!69;UBERON:0002616!1.88e-45!59;UBERON:0003075!1.33e-41!86;UBERON:0007284!1.33e-41!86;UBERON:0002346!1.62e-39!90;UBERON:0002780!1.84e-37!41;UBERON:0001890!1.84e-37!41;UBERON:0006240!1.84e-37!41;UBERON:0003080!3.85e-36!42;UBERON:0002020!1.58e-32!34;UBERON:0003528!1.58e-32!34;UBERON:0001893!1.69e-32!34;UBERON:0003056!5.31e-32!61;UBERON:0002791!1.76e-31!33;UBERON:0001869!3.68e-31!32;UBERON:0004121!6.81e-30!169;UBERON:0000924!4.58e-29!173;UBERON:0006601!4.58e-29!173;UBERON:0000033!2.01e-28!123;UBERON:0000153!3.69e-28!129;UBERON:0007811!3.69e-28!129;UBERON:0007023!2.80e-25!115;UBERON:0000956!3.31e-24!25;UBERON:0000203!3.31e-24!25;UBERON:0002619!1.35e-21!22;UBERON:0001950!5.73e-20!20;UBERON:0000025!2.32e-16!194;UBERON:0003076!1.29e-13!15;UBERON:0003057!1.29e-13!15;UBERON:0004111!1.70e-13!241;UBERON:0000477!4.00e-13!286;UBERON:0000119!3.75e-12!312;UBERON:0000483!6.18e-12!309;UBERON:0004732!6.62e-12!13;UBERON:0000489!8.64e-12!32;UBERON:0000064!9.48e-12!219;UBERON:0004733!3.24e-11!12;UBERON:0002028!3.24e-11!12;UBERON:0007277!3.24e-11!12;UBERON:0000080!1.88e-10!18;UBERON:0002120!1.88e-10!18;UBERON:0004875!1.88e-10!18;UBERON:0005721!1.88e-10!18;UBERON:0005754!1.88e-10!18;UBERON:0007297!1.88e-10!18;UBERON:0000475!2.42e-10!365;UBERON:0000468!2.56e-10!659;UBERON:0000922!2.66e-10!612;UBERON:0002113!6.32e-10!27;UBERON:0003918!6.32e-10!27;UBERON:0005095!6.32e-10!27;UBERON:0007687!6.32e-10!27;UBERON:0002420!9.49e-10!9;UBERON:0007245!9.49e-10!9;UBERON:0010009!9.49e-10!9;UBERON:0010011!9.49e-10!9;UBERON:0000454!9.49e-10!9;UBERON:0002308!1.07e-09!9;UBERON:0000125!1.07e-09!9;UBERON:0006555!1.08e-09!17;UBERON:0005103!1.08e-09!17;UBERON:0000083!1.08e-09!17;UBERON:0009201!1.08e-09!17;UBERON:0004819!1.08e-09!17;UBERON:0006553!1.08e-09!17;UBERON:0003074!1.08e-09!17;UBERON:0003060!1.08e-09!17;UBERON:0003887!3.44e-09!21;UBERON:0004211!4.71e-09!16;UBERON:0001285!4.71e-09!16;UBERON:0007684!4.71e-09!16;UBERON:0003220!4.71e-09!16;UBERON:0004208!4.71e-09!16;UBERON:0004876!7.37e-09!20;UBERON:0002680!8.80e-09!9;UBERON:0001895!8.80e-09!9;UBERON:0010092!8.80e-09!9;UBERON:0000062!9.53e-09!511;UBERON:0000467!1.35e-08!625;UBERON:0000480!1.70e-08!626;UBERON:0009773!2.31e-08!12;UBERON:0001231!2.31e-08!12;UBERON:0004810!2.31e-08!12;UBERON:0000481!3.03e-08!347;UBERON:0001871!3.20e-08!7;UBERON:0002050!3.93e-08!605;UBERON:0005423!3.93e-08!605;UBERON:0009663!5.96e-08!7;UBERON:0000923!7.52e-08!604;UBERON:0005291!7.52e-08!604;UBERON:0006598!7.52e-08!604;UBERON:0002532!7.52e-08!604;UBERON:0000058!1.65e-07!26;UBERON:0000200!7.42e-07!6;UBERON:0001225!8.25e-07!13;UBERON:0008987!8.25e-07!13 | |ontology_enrichment_uberon=UBERON:0005743!3.10e-58!86;UBERON:0001017!9.16e-58!82;UBERON:0000073!1.54e-55!94;UBERON:0001016!1.54e-55!94;UBERON:0001049!4.84e-49!57;UBERON:0005068!4.84e-49!57;UBERON:0006241!4.84e-49!57;UBERON:0007135!4.84e-49!57;UBERON:0000955!9.81e-49!69;UBERON:0006238!9.81e-49!69;UBERON:0002616!1.88e-45!59;UBERON:0003075!1.33e-41!86;UBERON:0007284!1.33e-41!86;UBERON:0002346!1.62e-39!90;UBERON:0002780!1.84e-37!41;UBERON:0001890!1.84e-37!41;UBERON:0006240!1.84e-37!41;UBERON:0003080!3.85e-36!42;UBERON:0002020!1.58e-32!34;UBERON:0003528!1.58e-32!34;UBERON:0001893!1.69e-32!34;UBERON:0003056!5.31e-32!61;UBERON:0002791!1.76e-31!33;UBERON:0001869!3.68e-31!32;UBERON:0004121!6.81e-30!169;UBERON:0000924!4.58e-29!173;UBERON:0006601!4.58e-29!173;UBERON:0000033!2.01e-28!123;UBERON:0000153!3.69e-28!129;UBERON:0007811!3.69e-28!129;UBERON:0007023!2.80e-25!115;UBERON:0000956!3.31e-24!25;UBERON:0000203!3.31e-24!25;UBERON:0002619!1.35e-21!22;UBERON:0001950!5.73e-20!20;UBERON:0000025!2.32e-16!194;UBERON:0003076!1.29e-13!15;UBERON:0003057!1.29e-13!15;UBERON:0004111!1.70e-13!241;UBERON:0000477!4.00e-13!286;UBERON:0000119!3.75e-12!312;UBERON:0000483!6.18e-12!309;UBERON:0004732!6.62e-12!13;UBERON:0000489!8.64e-12!32;UBERON:0000064!9.48e-12!219;UBERON:0004733!3.24e-11!12;UBERON:0002028!3.24e-11!12;UBERON:0007277!3.24e-11!12;UBERON:0000080!1.88e-10!18;UBERON:0002120!1.88e-10!18;UBERON:0004875!1.88e-10!18;UBERON:0005721!1.88e-10!18;UBERON:0005754!1.88e-10!18;UBERON:0007297!1.88e-10!18;UBERON:0000475!2.42e-10!365;UBERON:0000468!2.56e-10!659;UBERON:0000922!2.66e-10!612;UBERON:0002113!6.32e-10!27;UBERON:0003918!6.32e-10!27;UBERON:0005095!6.32e-10!27;UBERON:0007687!6.32e-10!27;UBERON:0002420!9.49e-10!9;UBERON:0007245!9.49e-10!9;UBERON:0010009!9.49e-10!9;UBERON:0010011!9.49e-10!9;UBERON:0000454!9.49e-10!9;UBERON:0002308!1.07e-09!9;UBERON:0000125!1.07e-09!9;UBERON:0006555!1.08e-09!17;UBERON:0005103!1.08e-09!17;UBERON:0000083!1.08e-09!17;UBERON:0009201!1.08e-09!17;UBERON:0004819!1.08e-09!17;UBERON:0006553!1.08e-09!17;UBERON:0003074!1.08e-09!17;UBERON:0003060!1.08e-09!17;UBERON:0003887!3.44e-09!21;UBERON:0004211!4.71e-09!16;UBERON:0001285!4.71e-09!16;UBERON:0007684!4.71e-09!16;UBERON:0003220!4.71e-09!16;UBERON:0004208!4.71e-09!16;UBERON:0004876!7.37e-09!20;UBERON:0002680!8.80e-09!9;UBERON:0001895!8.80e-09!9;UBERON:0010092!8.80e-09!9;UBERON:0000062!9.53e-09!511;UBERON:0000467!1.35e-08!625;UBERON:0000480!1.70e-08!626;UBERON:0009773!2.31e-08!12;UBERON:0001231!2.31e-08!12;UBERON:0004810!2.31e-08!12;UBERON:0000481!3.03e-08!347;UBERON:0001871!3.20e-08!7;UBERON:0002050!3.93e-08!605;UBERON:0005423!3.93e-08!605;UBERON:0009663!5.96e-08!7;UBERON:0000923!7.52e-08!604;UBERON:0005291!7.52e-08!604;UBERON:0006598!7.52e-08!604;UBERON:0002532!7.52e-08!604;UBERON:0000058!1.65e-07!26;UBERON:0000200!7.42e-07!6;UBERON:0001225!8.25e-07!13;UBERON:0008987!8.25e-07!13 | ||
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| ||
|short_description=p1@KCNIP1 | |short_description=p1@KCNIP1 | ||
}} | }} |
Latest revision as of 22:13, 16 September 2015
Short description: | p1@KCNIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNIP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000328939, ENST00000390656, NM_001034837, NM_014592, uc003mas.2, uc003mat.2, uc010jjp.2, uc010jjq.2_5end |
EntrezGene: | KCNIP1 |
HGNC: | 15521 |
UniProt: | Q3YAD2Q3YAD1Q9NZI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.93e-12 | 10 |
nephron tubule epithelial cell | 2.93e-12 | 10 |
oligodendrocyte | 1.15e-11 | 7 |
macroglial cell | 1.15e-11 | 7 |
astrocyte | 1.15e-11 | 7 |
oligodendrocyte precursor cell | 1.15e-11 | 7 |
kidney cell | 5.09e-11 | 17 |
kidney epithelial cell | 5.09e-11 | 17 |
epithelial cell of nephron | 8.92e-11 | 15 |
kidney cortical cell | 2.78e-07 | 12 |
renal cortical epithelial cell | 2.78e-07 | 12 |