FFCP PHASE1:Hg19::chr6:17393604..17393619,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10486 | |EntrezGene=10486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20039 | |HGNC=20039 | ||
|TSSclassifier=strong | |||
|UniProt=P40123,Q5JPJ8 | |UniProt=P40123,Q5JPJ8 | ||
|association_with_transcript=-116bp_to_NM_006366,uc003ncb.2,uc010jpk.1,uc011dja.1,uc011djb.1,uc011djc.1,uc011djd.1_5end | |association_with_transcript=-116bp_to_NM_006366,uc003ncb.2,uc010jpk.1,uc011dja.1,uc011djb.1,uc011djc.1,uc011djd.1_5end | ||
|cluster_id=chr6:17393604..17393619,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_CAP2_5end | |description=CAGE_peak_5_at_CAP2_5end | ||
|id=chr6:17393604..17393619,+ | |id=chr6:17393604..17393619,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.19e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.47e-28!86;UBERON:0000073!1.29e-27!94;UBERON:0001016!1.29e-27!94;UBERON:0001017!1.04e-26!82;UBERON:0001049!8.40e-25!57;UBERON:0005068!8.40e-25!57;UBERON:0006241!8.40e-25!57;UBERON:0007135!8.40e-25!57;UBERON:0007023!4.76e-23!115;UBERON:0003075!1.47e-22!86;UBERON:0007284!1.47e-22!86;UBERON:0000955!2.23e-21!69;UBERON:0006238!2.23e-21!69;UBERON:0002346!1.59e-20!90;UBERON:0000033!1.79e-20!123;UBERON:0004121!2.08e-20!169;UBERON:0002616!4.31e-20!59;UBERON:0000153!8.79e-20!129;UBERON:0007811!8.79e-20!129;UBERON:0000924!3.42e-19!173;UBERON:0006601!3.42e-19!173;UBERON:0003080!1.48e-17!42;UBERON:0002780!5.22e-17!41;UBERON:0001890!5.22e-17!41;UBERON:0006240!5.22e-17!41;UBERON:0000475!6.46e-17!365;UBERON:0002020!9.17e-16!34;UBERON:0003528!9.17e-16!34;UBERON:0001869!2.35e-15!32;UBERON:0001893!2.40e-15!34;UBERON:0002791!1.10e-14!33;UBERON:0000481!1.36e-14!347;UBERON:0003056!2.22e-14!61;UBERON:0001950!3.42e-14!20;UBERON:0002619!1.59e-13!22;UBERON:0000468!2.76e-12!659;UBERON:0000956!6.22e-12!25;UBERON:0000203!6.22e-12!25;UBERON:0000477!1.53e-11!286;UBERON:0004111!2.11e-10!241;UBERON:0000467!3.09e-10!625;UBERON:0000480!4.54e-10!626;UBERON:0000064!4.58e-10!219;UBERON:0000483!4.26e-09!309;UBERON:0000119!9.76e-09!312;UBERON:0000025!1.02e-08!194;UBERON:0003076!1.75e-08!15;UBERON:0003057!1.75e-08!15;UBERON:0000922!2.41e-08!612;UBERON:0000062!3.17e-08!511;UBERON:0002050!1.30e-07!605;UBERON:0005423!1.30e-07!605;UBERON:0000923!1.78e-07!604;UBERON:0005291!1.78e-07!604;UBERON:0006598!1.78e-07!604;UBERON:0002532!1.78e-07!604;UBERON:0004733!5.62e-07!12;UBERON:0002028!5.62e-07!12;UBERON:0007277!5.62e-07!12 | |ontology_enrichment_uberon=UBERON:0005743!3.47e-28!86;UBERON:0000073!1.29e-27!94;UBERON:0001016!1.29e-27!94;UBERON:0001017!1.04e-26!82;UBERON:0001049!8.40e-25!57;UBERON:0005068!8.40e-25!57;UBERON:0006241!8.40e-25!57;UBERON:0007135!8.40e-25!57;UBERON:0007023!4.76e-23!115;UBERON:0003075!1.47e-22!86;UBERON:0007284!1.47e-22!86;UBERON:0000955!2.23e-21!69;UBERON:0006238!2.23e-21!69;UBERON:0002346!1.59e-20!90;UBERON:0000033!1.79e-20!123;UBERON:0004121!2.08e-20!169;UBERON:0002616!4.31e-20!59;UBERON:0000153!8.79e-20!129;UBERON:0007811!8.79e-20!129;UBERON:0000924!3.42e-19!173;UBERON:0006601!3.42e-19!173;UBERON:0003080!1.48e-17!42;UBERON:0002780!5.22e-17!41;UBERON:0001890!5.22e-17!41;UBERON:0006240!5.22e-17!41;UBERON:0000475!6.46e-17!365;UBERON:0002020!9.17e-16!34;UBERON:0003528!9.17e-16!34;UBERON:0001869!2.35e-15!32;UBERON:0001893!2.40e-15!34;UBERON:0002791!1.10e-14!33;UBERON:0000481!1.36e-14!347;UBERON:0003056!2.22e-14!61;UBERON:0001950!3.42e-14!20;UBERON:0002619!1.59e-13!22;UBERON:0000468!2.76e-12!659;UBERON:0000956!6.22e-12!25;UBERON:0000203!6.22e-12!25;UBERON:0000477!1.53e-11!286;UBERON:0004111!2.11e-10!241;UBERON:0000467!3.09e-10!625;UBERON:0000480!4.54e-10!626;UBERON:0000064!4.58e-10!219;UBERON:0000483!4.26e-09!309;UBERON:0000119!9.76e-09!312;UBERON:0000025!1.02e-08!194;UBERON:0003076!1.75e-08!15;UBERON:0003057!1.75e-08!15;UBERON:0000922!2.41e-08!612;UBERON:0000062!3.17e-08!511;UBERON:0002050!1.30e-07!605;UBERON:0005423!1.30e-07!605;UBERON:0000923!1.78e-07!604;UBERON:0005291!1.78e-07!604;UBERON:0006598!1.78e-07!604;UBERON:0002532!1.78e-07!604;UBERON:0004733!5.62e-07!12;UBERON:0002028!5.62e-07!12;UBERON:0007277!5.62e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.63e-34;20!UBERON:0002619;5.48e-34;22!UBERON:0001869;6.31e-30;32!UBERON:0003528;2.00e-29;34!UBERON:0002020;2.00e-29;34!UBERON:0000956;2.92e-29;25!UBERON:0000203;2.92e-29;25!UBERON:0002791;1.05e-27;32!UBERON:0001893;2.05e-27;34!UBERON:0000073;4.09e-25;53!UBERON:0002616;4.09e-25;53!UBERON:0002780;1.54e-23;41!UBERON:0001890;1.54e-23;41!UBERON:0000955;4.33e-18;68!UBERON:0001017;4.87e-18;75!UBERON:0001016;3.16e-15;83!UBERON:0000200;2.37e-12;6!UBERON:0002298;2.15e-11;6!UBERON:0004733;2.46e-11;12!UBERON:0002028;2.46e-11;12!UBERON:0001871;2.08e-10;6!UBERON:0002021;2.39e-10;5!UBERON:0004732;2.62e-10;13!UBERON:0001872;4.82e-10;5!UBERON:0007023;2.01e-08;114!UBERON:0002680;2.28e-07;9!UBERON:0001895;2.28e-07;9!UBERON:0011216;3.17e-07;132!UBERON:0000988;4.00e-07;3!UBERON:0001870;6.05e-07;3!UBERON:0000369;6.25e-07;4!UBERON:0002435;6.25e-07;4!UBERON:0000204;6.25e-07;4 | |||
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| ||
|short_description=p5@CAP2 | |short_description=p5@CAP2 | ||
}} | }} |
Latest revision as of 00:32, 17 September 2015
Short description: | p5@CAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAP2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -116bp_to_NM_006366, uc003ncb.2, uc010jpk.1, uc011dja.1, uc011djb.1, uc011djc.1, uc011djd.1_5end |
EntrezGene: | CAP2 |
HGNC: | 20039 |
UniProt: | P40123Q5JPJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data