FFCP PHASE1:Hg19::chr17:72855989..72856015,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:72855989..72856015,- to FFCP PHASE1:Hg19::chr17:72855989..72856015,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2905 | |EntrezGene=2905 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4587 | |HGNC=4587 | ||
|TSSclassifier=strong | |||
|UniProt=Q14957,O15398 | |UniProt=Q14957,O15398 | ||
|association_with_transcript=0bp_to_ENST00000293190,NM_000835,uc002jlt.1,uc010wrh.1_5end | |||
|cluster_id=chr17:72855989..72856015,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_GRIN2C_5end | |||
|id=chr17:72855989..72856015,- | |||
|ontology_enrichment_celltype=CL:0000242!4.26e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.61e-18;82!UBERON:0006215;1.98e-16;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.41e-80!57;UBERON:0005068!6.41e-80!57;UBERON:0006241!6.41e-80!57;UBERON:0007135!6.41e-80!57;UBERON:0000955!1.35e-73!69;UBERON:0006238!1.35e-73!69;UBERON:0002616!4.89e-73!59;UBERON:0001017!1.46e-69!82;UBERON:0005743!7.54e-69!86;UBERON:0001893!1.49e-62!34;UBERON:0002020!1.80e-62!34;UBERON:0003528!1.80e-62!34;UBERON:0001869!5.55e-62!32;UBERON:0000073!2.57e-61!94;UBERON:0001016!2.57e-61!94;UBERON:0002791!1.01e-59!33;UBERON:0002780!8.72e-59!41;UBERON:0001890!8.72e-59!41;UBERON:0006240!8.72e-59!41;UBERON:0003075!1.09e-57!86;UBERON:0007284!1.09e-57!86;UBERON:0002346!2.76e-57!90;UBERON:0003080!3.21e-57!42;UBERON:0002619!6.91e-55!22;UBERON:0007023!5.04e-53!115;UBERON:0001950!3.71e-49!20;UBERON:0000956!7.39e-48!25;UBERON:0000203!7.39e-48!25;UBERON:0000033!2.92e-45!123;UBERON:0000153!1.22e-44!129;UBERON:0007811!1.22e-44!129;UBERON:0003056!2.09e-42!61;UBERON:0000924!2.35e-36!173;UBERON:0006601!2.35e-36!173;UBERON:0004121!7.13e-36!169;UBERON:0004733!3.57e-24!12;UBERON:0002028!3.57e-24!12;UBERON:0007277!3.57e-24!12;UBERON:0003076!1.00e-22!15;UBERON:0003057!1.00e-22!15;UBERON:0004732!3.84e-22!13;UBERON:0000200!1.97e-18!6;UBERON:0000025!2.96e-18!194;UBERON:0001871!2.97e-18!7;UBERON:0002680!1.33e-16!9;UBERON:0001895!1.33e-16!9;UBERON:0010092!1.33e-16!9;UBERON:0002420!4.85e-16!9;UBERON:0007245!4.85e-16!9;UBERON:0010009!4.85e-16!9;UBERON:0010011!4.85e-16!9;UBERON:0000454!4.85e-16!9;UBERON:0000349!6.33e-16!5;UBERON:0002308!1.01e-15!9;UBERON:0000125!1.01e-15!9;UBERON:0002021!1.39e-15!5;UBERON:0004111!2.35e-15!241;UBERON:0000477!1.03e-13!286;UBERON:0000483!2.78e-13!309;UBERON:0002298!3.40e-13!8;UBERON:0000119!4.88e-13!312;UBERON:0000064!5.57e-13!219;UBERON:0000475!1.66e-11!365;UBERON:0009663!1.03e-10!7;UBERON:0001872!1.78e-10!5;UBERON:0000988!4.70e-10!3;UBERON:0002771!7.86e-10!3;UBERON:0000062!1.57e-09!511;UBERON:0001896!1.71e-09!3;UBERON:0005290!1.71e-09!3;UBERON:0010096!1.71e-09!3;UBERON:0002037!6.92e-09!6;UBERON:0006215!6.92e-09!6;UBERON:0000481!1.92e-08!347;UBERON:0000922!9.36e-08!612;UBERON:0000369!1.14e-07!4;UBERON:0002435!1.14e-07!4;UBERON:0000204!1.14e-07!4;UBERON:0010082!1.14e-07!4;UBERON:0001876!1.63e-07!2;UBERON:0001870!2.16e-07!2;UBERON:0001954!2.30e-07!2;UBERON:0003022!2.30e-07!2;UBERON:0002421!2.30e-07!2;UBERON:0002600!2.30e-07!2;UBERON:0002148!4.39e-07!2;UBERON:0009662!4.39e-07!2;UBERON:0000923!7.13e-07!604;UBERON:0005291!7.13e-07!604;UBERON:0006598!7.13e-07!604;UBERON:0002532!7.13e-07!604;UBERON:0002050!7.74e-07!605;UBERON:0005423!7.74e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.54e-71;22!UBERON:0001893;1.17e-64;34!UBERON:0001869;1.79e-63;32!UBERON:0003528;1.32e-62;34!UBERON:0002020;1.32e-62;34!UBERON:0000956;1.86e-62;25!UBERON:0000203;1.86e-62;25!UBERON:0001950;2.85e-62;20!UBERON:0002791;1.93e-58;32!UBERON:0000073;1.73e-47;53!UBERON:0002616;1.73e-47;53!UBERON:0002780;1.64e-46;41!UBERON:0001890;1.64e-46;41!UBERON:0000955;2.68e-31;68!UBERON:0001017;8.11e-29;75!UBERON:0000200;3.59e-28;6!UBERON:0000349;5.10e-24;5!UBERON:0001016;4.39e-21;83!UBERON:0002680;1.51e-19;9!UBERON:0001895;1.51e-19;9!UBERON:0004733;2.19e-19;12!UBERON:0002028;2.19e-19;12!UBERON:0004732;8.03e-18;13!UBERON:0007023;2.20e-17;114!UBERON:0001871;5.13e-17;6!UBERON:0002021;7.18e-16;5!UBERON:0001872;7.60e-16;5!UBERON:0000988;5.67e-15;3!UBERON:0001870;5.67e-15;3!UBERON:0002420;3.47e-13;9!UBERON:0007245;3.47e-13;9!UBERON:0010009;3.47e-13;9!UBERON:0010011;3.47e-13;9!UBERON:0000454;3.47e-13;9!UBERON:0000125;5.45e-13;9!UBERON:0002308;5.45e-13;9!UBERON:0002298;6.85e-13;6!UBERON:0000369;2.34e-11;4!UBERON:0002435;2.34e-11;4!UBERON:0000204;2.34e-11;4!UBERON:0011216;7.10e-11;132!UBERON:0001954;8.30e-11;2!UBERON:0003022;8.30e-11;2!UBERON:0002421;8.30e-11;2!UBERON:0002600;8.30e-11;2!UBERON:0001876;1.11e-10;2!UBERON:0002702;1.11e-10;2!UBERON:0002771;2.59e-10;2!UBERON:0002148;2.59e-10;2!UBERON:0006331;2.59e-10;2!UBERON:0009662;2.59e-10;2!UBERON:0002037;1.99e-08;6!UBERON:0005383;2.15e-07;3!UBERON:0005382;2.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.27e-85,53;UBERON:0002616,2.27e-85,53;UBERON:0001049,1.61e-80,56;UBERON:0005068,1.61e-80,56;UBERON:0006241,1.61e-80,56;UBERON:0007135,1.61e-80,56;UBERON:0001893,7.80e-74,34;UBERON:0003528,1.02e-73,34;UBERON:0002020,1.02e-73,34;UBERON:0000955,3.77e-73,68;UBERON:0006238,3.77e-73,68;UBERON:0001869,3.33e-72,32;UBERON:0002619,1.51e-71,22;UBERON:0002780,4.10e-66,41;UBERON:0001890,4.10e-66,41;UBERON:0003080,4.10e-66,41;UBERON:0006240,4.10e-66,41;UBERON:0002791,9.12e-66,32;UBERON:0001017,2.40e-64,81;UBERON:0000956,8.75e-63,25;UBERON:0000203,8.75e-63,25;UBERON:0001950,1.08e-62,20;UBERON:0001016,2.36e-57,89;UBERON:0007023,5.28e-54,114;UBERON:0003075,3.68e-53,82;UBERON:0007284,3.68e-53,82;UBERON:0002346,2.11e-50,86;UBERON:0010371,1.39e-43,104;UBERON:0003056,6.13e-43,61;UBERON:0010314,1.46e-37,132;UBERON:0004121,7.65e-33,171;UBERON:0000924,7.65e-33,171;UBERON:0006601,7.65e-33,171;UBERON:0000200,3.14e-28,6;UBERON:0000349,2.95e-24,5;UBERON:0011216,2.14e-23,223;UBERON:0002680,1.52e-19,9;UBERON:0001895,1.52e-19,9;UBERON:0010092,1.52e-19,9;UBERON:0004733,1.74e-19,12;UBERON:0002028,1.74e-19,12;UBERON:0007277,1.74e-19,12;UBERON:0000025,6.36e-19,192;UBERON:0004732,6.50e-18,13;UBERON:0001871,3.37e-17,6;UBERON:0004111,3.63e-16,240;UBERON:0002021,6.30e-16,5;UBERON:0001872,7.35e-16,5;UBERON:0003076,2.13e-15,15;UBERON:0003057,2.13e-15,15;UBERON:0001870,3.35e-15,3;UBERON:0000988,5.70e-15,3;UBERON:0002420,2.21e-13,9;UBERON:0007245,2.21e-13,9;UBERON:0010009,2.21e-13,9;UBERON:0010011,2.21e-13,9;UBERON:0000454,2.21e-13,9;UBERON:0000125,5.07e-13,9;UBERON:0002308,5.07e-13,9;UBERON:0002298,5.27e-13,6;UBERON:0000483,3.92e-12,306;UBERON:0000119,6.05e-12,309;UBERON:0000369,2.03e-11,4;UBERON:0002435,2.03e-11,4;UBERON:0000204,2.03e-11,4;UBERON:0010082,2.03e-11,4;UBERON:0001876,5.75e-11,2;UBERON:0002702,6.67e-11,2;UBERON:0001954,9.88e-11,2;UBERON:0003022,9.88e-11,2;UBERON:0002421,9.88e-11,2;UBERON:0002600,9.88e-11,2;UBERON:0002148,2.72e-10,2;UBERON:0006331,2.72e-10,2;UBERON:0009662,2.72e-10,2;UBERON:0002771,3.45e-10,2;UBERON:0002037,1.99e-08,6;UBERON:0006215,1.99e-08,6;UBERON:0005383,1.99e-07,3;UBERON:0005382,1.99e-07,3 | |||
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| ||
|short_description=p1@GRIN2C | |||
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Latest revision as of 09:06, 17 September 2015
Short description: | p1@GRIN2C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRIN2C_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000293190, NM_000835, uc002jlt.1, uc010wrh.1_5end |
EntrezGene: | GRIN2C |
HGNC: | 4587 |
UniProt: | Q14957O15398 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data