FFCP PHASE1:Hg19::chr8:21924052..21924103,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2039 | |EntrezGene=2039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3382 | |HGNC=3382 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000519333_5end | |association_with_transcript=25bp_to_ENST00000519333_5end | ||
|cluster_id=chr8:21924052..21924103,+ | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_6_at_EPB49_5end | |description=CAGE_peak_6_at_EPB49_5end | ||
|id=chr8:21924052..21924103,+ | |id=chr8:21924052..21924103,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.88e-23!24;CL:0000115!2.15e-20!35;CL:0000071!6.54e-18!18;CL:0002546!6.54e-18!18;CL:0002078!1.82e-14!44;CL:1000413!1.26e-09!9;CL:0000222!4.29e-09!119;CL:0000213!6.85e-09!57;CL:0000215!6.85e-09!57;CL:0002544!4.92e-07!6;CL:0002543!5.16e-07!6;CL:0005020!6.62e-07!6;CL:0002138!6.62e-07!6;CL:0005022!6.62e-07!6 | |ontology_enrichment_celltype=CL:0002139!2.88e-23!24;CL:0000115!2.15e-20!35;CL:0000071!6.54e-18!18;CL:0002546!6.54e-18!18;CL:0002078!1.82e-14!44;CL:1000413!1.26e-09!9;CL:0000222!4.29e-09!119;CL:0000213!6.85e-09!57;CL:0000215!6.85e-09!57;CL:0002544!4.92e-07!6;CL:0002543!5.16e-07!6;CL:0005020!6.62e-07!6;CL:0002138!6.62e-07!6;CL:0005022!6.62e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.82e-40;24!CL:0000115;9.32e-33;36!CL:0000071;1.97e-30;18!CL:0002078;1.18e-18;45!CL:1000413;8.81e-16;9!CL:0000213;6.76e-13;58!CL:0000215;6.76e-13;58!CL:0002544;3.28e-11;6!CL:0002543;3.46e-11;6!CL:0002138;5.87e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.61e-40,24;CL:0000115,5.06e-39,36;CL:0000071,2.29e-30,18;CL:0002546,2.29e-30,18;CL:0002078,5.28e-29,45;CL:0000213,3.96e-20,58;CL:0000215,3.96e-20,58;CL:1000413,9.53e-16,9;CL:0000222,2.39e-14,121;CL:0002544,3.35e-11,6;CL:0002543,3.64e-11,6;CL:0005020,5.64e-11,6;CL:0002138,5.64e-11,6;CL:0005022,5.64e-11,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.97e-30;18!CL:0005022;5.87e-11;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.83e-44!241;UBERON:0000025!1.25e-41!194;UBERON:0000477!3.70e-36!286;UBERON:0007023!1.76e-35!115;UBERON:0000055!4.67e-29!69;UBERON:0003914!1.82e-25!118;UBERON:0000483!2.98e-25!309;UBERON:0001981!3.91e-25!60;UBERON:0007500!3.91e-25!60;UBERON:0004537!3.91e-25!60;UBERON:0006965!3.91e-25!60;UBERON:0000119!6.00e-25!312;UBERON:0004872!7.76e-25!84;UBERON:0002049!7.95e-24!79;UBERON:0007798!7.95e-24!79;UBERON:0001009!6.63e-20!113;UBERON:0004535!2.44e-18!110;UBERON:0001986!6.54e-18!18;UBERON:0004638!6.54e-18!18;UBERON:0004852!6.54e-18!18;UBERON:0001049!1.27e-17!57;UBERON:0005068!1.27e-17!57;UBERON:0006241!1.27e-17!57;UBERON:0007135!1.27e-17!57;UBERON:0001637!1.51e-15!42;UBERON:0003509!1.51e-15!42;UBERON:0004572!1.51e-15!42;UBERON:0002616!3.33e-14!59;UBERON:0003080!6.56e-14!42;UBERON:0003075!1.04e-13!86;UBERON:0007284!1.04e-13!86;UBERON:0000468!2.51e-13!659;UBERON:0002780!3.45e-13!41;UBERON:0001890!3.45e-13!41;UBERON:0006240!3.45e-13!41;UBERON:0002020!4.09e-13!34;UBERON:0003528!4.09e-13!34;UBERON:0000487!4.37e-13!22;UBERON:0001893!7.29e-13!34;UBERON:0000467!1.16e-12!625;UBERON:0000481!1.32e-12!347;UBERON:0000480!1.57e-12!626;UBERON:0002791!2.03e-12!33;UBERON:0002346!2.73e-12!90;UBERON:0001869!6.13e-12!32;UBERON:0004573!8.13e-12!33;UBERON:0004571!8.13e-12!33;UBERON:0003103!2.11e-11!69;UBERON:0000955!5.01e-11!69;UBERON:0006238!5.01e-11!69;UBERON:0001017!7.32e-11!82;UBERON:0006914!1.51e-10!25;UBERON:0005743!3.25e-10!86;UBERON:0000490!4.56e-10!138;UBERON:0000073!7.52e-10!94;UBERON:0001016!7.52e-10!94;UBERON:0003915!1.26e-09!9;UBERON:0004700!1.26e-09!9;UBERON:0001917!1.26e-09!9;UBERON:0000922!1.33e-09!612;UBERON:0000956!1.36e-08!25;UBERON:0000203!1.36e-08!25;UBERON:0000475!1.69e-08!365;UBERON:0003056!3.79e-08!61;UBERON:0001950!4.25e-08!20;UBERON:0002050!4.79e-08!605;UBERON:0005423!4.79e-08!605;UBERON:0000923!7.65e-08!604;UBERON:0005291!7.65e-08!604;UBERON:0006598!7.65e-08!604;UBERON:0002532!7.65e-08!604;UBERON:0002619!7.72e-08!22;UBERON:0007100!1.19e-07!27;UBERON:0000947!2.60e-07!21;UBERON:0010191!2.60e-07!21;UBERON:0000064!3.66e-07!219;UBERON:0002465!9.15e-07!10 | |ontology_enrichment_uberon=UBERON:0004111!1.83e-44!241;UBERON:0000025!1.25e-41!194;UBERON:0000477!3.70e-36!286;UBERON:0007023!1.76e-35!115;UBERON:0000055!4.67e-29!69;UBERON:0003914!1.82e-25!118;UBERON:0000483!2.98e-25!309;UBERON:0001981!3.91e-25!60;UBERON:0007500!3.91e-25!60;UBERON:0004537!3.91e-25!60;UBERON:0006965!3.91e-25!60;UBERON:0000119!6.00e-25!312;UBERON:0004872!7.76e-25!84;UBERON:0002049!7.95e-24!79;UBERON:0007798!7.95e-24!79;UBERON:0001009!6.63e-20!113;UBERON:0004535!2.44e-18!110;UBERON:0001986!6.54e-18!18;UBERON:0004638!6.54e-18!18;UBERON:0004852!6.54e-18!18;UBERON:0001049!1.27e-17!57;UBERON:0005068!1.27e-17!57;UBERON:0006241!1.27e-17!57;UBERON:0007135!1.27e-17!57;UBERON:0001637!1.51e-15!42;UBERON:0003509!1.51e-15!42;UBERON:0004572!1.51e-15!42;UBERON:0002616!3.33e-14!59;UBERON:0003080!6.56e-14!42;UBERON:0003075!1.04e-13!86;UBERON:0007284!1.04e-13!86;UBERON:0000468!2.51e-13!659;UBERON:0002780!3.45e-13!41;UBERON:0001890!3.45e-13!41;UBERON:0006240!3.45e-13!41;UBERON:0002020!4.09e-13!34;UBERON:0003528!4.09e-13!34;UBERON:0000487!4.37e-13!22;UBERON:0001893!7.29e-13!34;UBERON:0000467!1.16e-12!625;UBERON:0000481!1.32e-12!347;UBERON:0000480!1.57e-12!626;UBERON:0002791!2.03e-12!33;UBERON:0002346!2.73e-12!90;UBERON:0001869!6.13e-12!32;UBERON:0004573!8.13e-12!33;UBERON:0004571!8.13e-12!33;UBERON:0003103!2.11e-11!69;UBERON:0000955!5.01e-11!69;UBERON:0006238!5.01e-11!69;UBERON:0001017!7.32e-11!82;UBERON:0006914!1.51e-10!25;UBERON:0005743!3.25e-10!86;UBERON:0000490!4.56e-10!138;UBERON:0000073!7.52e-10!94;UBERON:0001016!7.52e-10!94;UBERON:0003915!1.26e-09!9;UBERON:0004700!1.26e-09!9;UBERON:0001917!1.26e-09!9;UBERON:0000922!1.33e-09!612;UBERON:0000956!1.36e-08!25;UBERON:0000203!1.36e-08!25;UBERON:0000475!1.69e-08!365;UBERON:0003056!3.79e-08!61;UBERON:0001950!4.25e-08!20;UBERON:0002050!4.79e-08!605;UBERON:0005423!4.79e-08!605;UBERON:0000923!7.65e-08!604;UBERON:0005291!7.65e-08!604;UBERON:0006598!7.65e-08!604;UBERON:0002532!7.65e-08!604;UBERON:0002619!7.72e-08!22;UBERON:0007100!1.19e-07!27;UBERON:0000947!2.60e-07!21;UBERON:0010191!2.60e-07!21;UBERON:0000064!3.66e-07!219;UBERON:0002465!9.15e-07!10 | ||
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| ||
|short_description=p6@EPB49 | |short_description=p6@EPB49 | ||
}} | }} |
Latest revision as of 09:54, 17 September 2015
Short description: | p6@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EPB49_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 25bp_to_ENST00000519333_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.61e-40 | 24 |
endothelial cell | 5.06e-39 | 36 |
blood vessel endothelial cell | 2.29e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.29e-30 | 18 |
meso-epithelial cell | 5.28e-29 | 45 |
lining cell | 3.96e-20 | 58 |
barrier cell | 3.96e-20 | 58 |
endothelial cell of artery | 9.53e-16 | 9 |
mesodermal cell | 2.39e-14 | 121 |
aortic endothelial cell | 3.35e-11 | 6 |
vein endothelial cell | 3.64e-11 | 6 |
lymphangioblast | 5.64e-11 | 6 |
endothelial cell of lymphatic vessel | 5.64e-11 | 6 |
vascular lymphangioblast | 5.64e-11 | 6 |