FFCP PHASE1:Hg19::chr17:73717429..73717443,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:73717429..73717443,+
|short_description=p4@ITGB4
|description=CAGE_peak_4_at_ITGB4_5end
|association_with_transcript=-72bp_to_ENST00000200181,ENST00000339...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3691 | |EntrezGene=3691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6158 | |HGNC=6158 | ||
|TSSclassifier=strong | |||
|UniProt=P16144,A0AVL6 | |UniProt=P16144,A0AVL6 | ||
|association_with_transcript=-72bp_to_ENST00000200181,ENST00000339591,NM_000213,NM_001005731,uc002jpg.2,uc002jph.2_5end | |||
|cluster_id=chr17:73717429..73717443,+ | |||
|description=CAGE_peak_4_at_ITGB4_5end | |||
|id=chr17:73717429..73717443,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.33e-16!254;CL:0002076!7.26e-09!43;CL:0000223!2.72e-07!59;CL:0000076!7.54e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002251;4.47e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.58e-08,253;CL:0002076,5.61e-08,42;CL:0002251,4.81e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.41e-08;82 | |||
|ontology_enrichment_disease=DOID:305!7.20e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;2.22e-12;53!UBERON:0002616;2.22e-12;53!UBERON:0007023;8.49e-12;114!UBERON:0001893;3.18e-11;34!UBERON:0003528;6.69e-11;34!UBERON:0002020;6.69e-11;34!UBERON:0002791;9.19e-11;32!UBERON:0002780;1.88e-10;41!UBERON:0001890;1.88e-10;41!UBERON:0001869;3.39e-10;32!UBERON:0004732;1.16e-09;13!UBERON:0004733;1.71e-09;12!UBERON:0002028;1.71e-09;12!UBERON:0000955;8.13e-08;68!UBERON:0000956;1.08e-07;25!UBERON:0000203;1.08e-07;25!UBERON:0000125;1.38e-07;9!UBERON:0002308;1.38e-07;9!UBERON:0001017;1.85e-07;75!UBERON:0002680;9.27e-07;9!UBERON:0001895;9.27e-07;9!UBERON:0001044;9.49e-07;6!UBERON:0003293;9.49e-07;6!UBERON:0003294;9.49e-07;6!UBERON:0010047;9.49e-07;6!UBERON:0003408;9.49e-07;6!UBERON:0000167;9.49e-07;6 | |||
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| ||
|short_description=p4@ITGB4 | |||
}} | }} |
Latest revision as of 11:57, 17 September 2015
Short description: | p4@ITGB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGB4_5end |
Coexpression cluster: | NA |
Association with transcript: | -72bp_to_ENST00000200181, ENST00000339591, NM_000213, NM_001005731, uc002jpg.2, uc002jph.2_5end |
EntrezGene: | ITGB4 |
HGNC: | 6158 |
UniProt: | P16144A0AVL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.58e-08 | 253 |
endo-epithelial cell | 5.61e-08 | 42 |
epithelial cell of alimentary canal | 4.81e-07 | 20 |