FFCP PHASE1:Hg19::chr7:20370666..20370680,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3696 | |EntrezGene=3696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6163 | |HGNC=6163 | ||
|TSSclassifier=strong | |||
|UniProt=P26012,Q9BUG9 | |UniProt=P26012,Q9BUG9 | ||
|association_with_transcript=-44bp_to_ENST00000478974,NM_002214,uc003sut.2,uc003suu.2_5end | |association_with_transcript=-44bp_to_ENST00000478974,NM_002214,uc003sut.2,uc003suu.2_5end | ||
|cluster_id=chr7:20370666..20370680,+ | |||
|coexpression_cluster_id=C1537 | |coexpression_cluster_id=C1537 | ||
|description=CAGE_peak_5_at_ITGB8_5end | |description=CAGE_peak_5_at_ITGB8_5end | ||
|id=chr7:20370666..20370680,+ | |id=chr7:20370666..20370680,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.14e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.52e-27!57;UBERON:0005068!1.52e-27!57;UBERON:0006241!1.52e-27!57;UBERON:0007135!1.52e-27!57;UBERON:0005743!6.56e-25!86;UBERON:0001017!4.43e-24!82;UBERON:0002616!2.99e-22!59;UBERON:0000073!3.93e-22!94;UBERON:0001016!3.93e-22!94;UBERON:0000955!1.13e-20!69;UBERON:0006238!1.13e-20!69;UBERON:0003075!1.42e-20!86;UBERON:0007284!1.42e-20!86;UBERON:0003080!3.07e-20!42;UBERON:0002780!5.10e-20!41;UBERON:0001890!5.10e-20!41;UBERON:0006240!5.10e-20!41;UBERON:0000033!1.51e-19!123;UBERON:0002346!2.08e-19!90;UBERON:0000153!2.00e-18!129;UBERON:0007811!2.00e-18!129;UBERON:0002020!1.27e-17!34;UBERON:0003528!1.27e-17!34;UBERON:0007023!1.37e-17!115;UBERON:0004121!1.46e-17!169;UBERON:0001893!3.02e-17!34;UBERON:0003056!4.99e-17!61;UBERON:0000924!5.53e-17!173;UBERON:0006601!5.53e-17!173;UBERON:0002791!7.47e-17!33;UBERON:0001869!4.51e-16!32;UBERON:0000062!9.52e-16!511;UBERON:0000467!7.32e-14!625;UBERON:0000480!7.56e-14!626;UBERON:0004111!1.37e-13!241;UBERON:0002050!1.54e-13!605;UBERON:0005423!1.54e-13!605;UBERON:0000922!1.62e-13!612;UBERON:0000477!1.70e-13!286;UBERON:0000923!2.27e-13!604;UBERON:0005291!2.27e-13!604;UBERON:0006598!2.27e-13!604;UBERON:0002532!2.27e-13!604;UBERON:0000468!2.41e-12!659;UBERON:0000956!2.77e-12!25;UBERON:0000203!2.77e-12!25;UBERON:0000025!1.10e-10!194;UBERON:0002619!1.91e-10!22;UBERON:0000481!4.44e-10!347;UBERON:0001950!2.06e-09!20;UBERON:0000064!1.29e-08!219;UBERON:0003076!1.89e-08!15;UBERON:0003057!1.89e-08!15;UBERON:0000475!8.29e-08!365;UBERON:0004732!4.67e-07!13;UBERON:0002308!6.27e-07!9;UBERON:0000125!6.27e-07!9;UBERON:0000483!9.13e-07!309 | |ontology_enrichment_uberon=UBERON:0001049!1.52e-27!57;UBERON:0005068!1.52e-27!57;UBERON:0006241!1.52e-27!57;UBERON:0007135!1.52e-27!57;UBERON:0005743!6.56e-25!86;UBERON:0001017!4.43e-24!82;UBERON:0002616!2.99e-22!59;UBERON:0000073!3.93e-22!94;UBERON:0001016!3.93e-22!94;UBERON:0000955!1.13e-20!69;UBERON:0006238!1.13e-20!69;UBERON:0003075!1.42e-20!86;UBERON:0007284!1.42e-20!86;UBERON:0003080!3.07e-20!42;UBERON:0002780!5.10e-20!41;UBERON:0001890!5.10e-20!41;UBERON:0006240!5.10e-20!41;UBERON:0000033!1.51e-19!123;UBERON:0002346!2.08e-19!90;UBERON:0000153!2.00e-18!129;UBERON:0007811!2.00e-18!129;UBERON:0002020!1.27e-17!34;UBERON:0003528!1.27e-17!34;UBERON:0007023!1.37e-17!115;UBERON:0004121!1.46e-17!169;UBERON:0001893!3.02e-17!34;UBERON:0003056!4.99e-17!61;UBERON:0000924!5.53e-17!173;UBERON:0006601!5.53e-17!173;UBERON:0002791!7.47e-17!33;UBERON:0001869!4.51e-16!32;UBERON:0000062!9.52e-16!511;UBERON:0000467!7.32e-14!625;UBERON:0000480!7.56e-14!626;UBERON:0004111!1.37e-13!241;UBERON:0002050!1.54e-13!605;UBERON:0005423!1.54e-13!605;UBERON:0000922!1.62e-13!612;UBERON:0000477!1.70e-13!286;UBERON:0000923!2.27e-13!604;UBERON:0005291!2.27e-13!604;UBERON:0006598!2.27e-13!604;UBERON:0002532!2.27e-13!604;UBERON:0000468!2.41e-12!659;UBERON:0000956!2.77e-12!25;UBERON:0000203!2.77e-12!25;UBERON:0000025!1.10e-10!194;UBERON:0002619!1.91e-10!22;UBERON:0000481!4.44e-10!347;UBERON:0001950!2.06e-09!20;UBERON:0000064!1.29e-08!219;UBERON:0003076!1.89e-08!15;UBERON:0003057!1.89e-08!15;UBERON:0000475!8.29e-08!365;UBERON:0004732!4.67e-07!13;UBERON:0002308!6.27e-07!9;UBERON:0000125!6.27e-07!9;UBERON:0000483!9.13e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.78e-21;34!UBERON:0002020;8.78e-21;34!UBERON:0002791;1.38e-20;32!UBERON:0001893;1.99e-20;34!UBERON:0001869;2.51e-20;32!UBERON:0002780;2.84e-20;41!UBERON:0001890;2.84e-20;41!UBERON:0000073;1.48e-18;53!UBERON:0002616;1.48e-18;53!UBERON:0000956;7.17e-17;25!UBERON:0000203;7.17e-17;25!UBERON:0002619;3.17e-14;22!UBERON:0001950;9.82e-13;20!UBERON:0000955;8.21e-12;68!UBERON:0001017;1.08e-11;75!UBERON:0001016;1.28e-10;83!UBERON:0000125;3.96e-09;9!UBERON:0002308;3.96e-09;9!UBERON:0007023;1.67e-07;114!UBERON:0009663;3.59e-07;7!UBERON:0002420;6.58e-07;9!UBERON:0007245;6.58e-07;9!UBERON:0010009;6.58e-07;9!UBERON:0010011;6.58e-07;9!UBERON:0000454;6.58e-07;9 | |||
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| ||
|short_description=p5@ITGB8 | |short_description=p5@ITGB8 | ||
}} | }} |
Latest revision as of 16:35, 17 September 2015
Short description: | p5@ITGB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ITGB8_5end |
Coexpression cluster: | C1537_clear_endometrial_serous_Neural_Fibroblast_CD14_melanoma |
Association with transcript: | -44bp_to_ENST00000478974, NM_002214, uc003sut.2, uc003suu.2_5end |
EntrezGene: | ITGB8 |
HGNC: | 6163 |
UniProt: | P26012Q9BUG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data