FFCP PHASE1:Hg19::chr15:43809797..43809860,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4130 | |EntrezGene=4130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6835 | |HGNC=6835 | ||
|TSSclassifier=strong | |||
|UniProt=P78559,Q504X9 | |UniProt=P78559,Q504X9 | ||
|association_with_transcript=0bp_to_ENST00000300231,ENST00000399453,NM_002373,uc001zrt.2_5end | |association_with_transcript=0bp_to_ENST00000300231,ENST00000399453,NM_002373,uc001zrt.2_5end | ||
|cluster_id=chr15:43809797..43809860,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_MAP1A_5end | |description=CAGE_peak_1_at_MAP1A_5end | ||
|id=chr15:43809797..43809860,+ | |id=chr15:43809797..43809860,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.39e-28!180;CL:0000057!8.65e-17!75;CL:0000680!3.62e-14!57;CL:0000056!3.62e-14!57;CL:0000355!3.62e-14!57;CL:0000183!5.70e-14!59;CL:0000187!1.60e-13!54;CL:0000393!2.63e-12!60;CL:0000211!2.63e-12!60;CL:0000192!8.21e-12!42;CL:0000514!8.21e-12!42;CL:0000359!1.30e-09!32;CL:0002620!3.59e-08!23 | |ontology_enrichment_celltype=CL:0000055!1.39e-28!180;CL:0000057!8.65e-17!75;CL:0000680!3.62e-14!57;CL:0000056!3.62e-14!57;CL:0000355!3.62e-14!57;CL:0000183!5.70e-14!59;CL:0000187!1.60e-13!54;CL:0000393!2.63e-12!60;CL:0000211!2.63e-12!60;CL:0000192!8.21e-12!42;CL:0000514!8.21e-12!42;CL:0000359!1.30e-09!32;CL:0002620!3.59e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.26e-09;32!CL:0000192;5.73e-09;43!CL:0002620;2.46e-08;23!CL:0000187;7.40e-08;55!CL:0000057;2.42e-07;73!CL:0000393;4.90e-07;61!CL:0000211;4.90e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.31e-17,76;CL:0000680,1.20e-14,58;CL:0000056,1.20e-14,58;CL:0000355,1.20e-14,58;CL:0000187,5.53e-14,55;CL:0000393,9.65e-13,61;CL:0000211,9.65e-13,61;CL:0000192,3.17e-12,43;CL:0000514,3.17e-12,43;CL:0000359,8.41e-10,32;CL:0002620,2.50e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.73e-09;43!CL:0000355;4.13e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.96e-27!57;UBERON:0005068!1.96e-27!57;UBERON:0006241!1.96e-27!57;UBERON:0007135!1.96e-27!57;UBERON:0002616!3.23e-26!59;UBERON:0001017!9.78e-26!82;UBERON:0005743!4.49e-25!86;UBERON:0000073!6.45e-25!94;UBERON:0001016!6.45e-25!94;UBERON:0000955!2.70e-24!69;UBERON:0006238!2.70e-24!69;UBERON:0003075!2.79e-22!86;UBERON:0007284!2.79e-22!86;UBERON:0007023!3.14e-22!115;UBERON:0002346!3.10e-21!90;UBERON:0002780!9.25e-21!41;UBERON:0001890!9.25e-21!41;UBERON:0006240!9.25e-21!41;UBERON:0003080!1.47e-20!42;UBERON:0000475!3.09e-20!365;UBERON:0001893!7.28e-19!34;UBERON:0002020!8.98e-19!34;UBERON:0003528!8.98e-19!34;UBERON:0002791!3.47e-18!33;UBERON:0001869!9.19e-18!32;UBERON:0003056!2.29e-17!61;UBERON:0000033!2.74e-17!123;UBERON:0000153!8.61e-17!129;UBERON:0007811!8.61e-17!129;UBERON:0000914!9.32e-17!83;UBERON:0002329!9.32e-17!83;UBERON:0003077!9.32e-17!83;UBERON:0003059!9.32e-17!83;UBERON:0007282!9.32e-17!83;UBERON:0009618!9.32e-17!83;UBERON:0007285!9.32e-17!83;UBERON:0004290!4.25e-15!70;UBERON:0004121!6.80e-15!169;UBERON:0000924!1.63e-14!173;UBERON:0006601!1.63e-14!173;UBERON:0000119!1.86e-14!312;UBERON:0002619!2.91e-14!22;UBERON:0000483!3.83e-14!309;UBERON:0002385!4.11e-14!63;UBERON:0001015!4.11e-14!63;UBERON:0000383!4.11e-14!63;UBERON:0001134!6.66e-14!61;UBERON:0002036!6.66e-14!61;UBERON:0003082!6.66e-14!61;UBERON:0000025!7.81e-14!194;UBERON:0000956!1.81e-13!25;UBERON:0000203!1.81e-13!25;UBERON:0001950!5.73e-13!20;UBERON:0000486!7.56e-12!82;UBERON:0004111!1.01e-10!241;UBERON:0000477!5.13e-10!286;UBERON:0000481!1.33e-09!347;UBERON:0000468!2.48e-09!659;UBERON:0000479!1.52e-08!787;UBERON:0003076!5.08e-08!15;UBERON:0003057!5.08e-08!15;UBERON:0000467!8.69e-08!625;UBERON:0000480!1.42e-07!626;UBERON:0005256!1.92e-07!143;UBERON:0004573!3.02e-07!33;UBERON:0004571!3.02e-07!33;UBERON:0001637!3.43e-07!42;UBERON:0003509!3.43e-07!42;UBERON:0004572!3.43e-07!42;UBERON:0004732!5.41e-07!13;UBERON:0002420!5.68e-07!9;UBERON:0007245!5.68e-07!9;UBERON:0010009!5.68e-07!9;UBERON:0010011!5.68e-07!9;UBERON:0000454!5.68e-07!9;UBERON:0002308!7.91e-07!9;UBERON:0000125!7.91e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.12e-16;34!UBERON:0003528;2.05e-16;34!UBERON:0002020;2.05e-16;34!UBERON:0001869;2.17e-16;32!UBERON:0002791;2.99e-16;32!UBERON:0002780;2.51e-15;41!UBERON:0001890;2.51e-15;41!UBERON:0000073;3.50e-15;53!UBERON:0002616;3.50e-15;53!UBERON:0002619;1.44e-14;22!UBERON:0000956;9.24e-14;25!UBERON:0000203;9.24e-14;25!UBERON:0001950;3.05e-13;20!UBERON:0001017;4.24e-12;75!UBERON:0000955;1.77e-11;68!UBERON:0001016;1.97e-10;83!UBERON:0002385;1.45e-07;31!UBERON:0001015;1.45e-07;31!UBERON:0000383;1.45e-07;31!UBERON:0004732;4.08e-07;13!UBERON:0002420;4.23e-07;9!UBERON:0007245;4.23e-07;9!UBERON:0010009;4.23e-07;9!UBERON:0010011;4.23e-07;9!UBERON:0000454;4.23e-07;9!UBERON:0000125;5.94e-07;9!UBERON:0002308;5.94e-07;9!UBERON:0010314;8.86e-07;132 | |||
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| ||
|short_description=p1@MAP1A | |short_description=p1@MAP1A | ||
}} | }} |
Latest revision as of 17:29, 17 September 2015
Short description: | p1@MAP1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAP1A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000300231, ENST00000399453, NM_002373, uc001zrt.2_5end |
EntrezGene: | MAP1A |
HGNC: | 6835 |
UniProt: | P78559Q504X9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.31e-17 | 76 |
muscle precursor cell | 1.20e-14 | 58 |
myoblast | 1.20e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.20e-14 | 58 |
muscle cell | 5.53e-14 | 55 |
electrically responsive cell | 9.65e-13 | 61 |
electrically active cell | 9.65e-13 | 61 |
smooth muscle cell | 3.17e-12 | 43 |
smooth muscle myoblast | 3.17e-12 | 43 |
vascular associated smooth muscle cell | 8.41e-10 | 32 |
skin fibroblast | 2.50e-08 | 23 |