FFCP PHASE1:Hg19::chr21:27543073..27543094,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000348990_5end | |association_with_transcript=0bp_to_ENST00000348990_5end | ||
|cluster_id=chr21:27543073..27543094,- | |||
|description=CAGE_peak_1_at_APP_5end | |description=CAGE_peak_1_at_APP_5end | ||
|id=chr21:27543073..27543094,- | |id=chr21:27543073..27543094,- | ||
|ontology_enrichment_celltype=CL:0000066!4.23e-17!254;CL:0002139!1.05e-12!24;CL:0002321!1.61e-12!248;CL:0000220!2.61e-12!246;CL:0000213!2.24e-11!57;CL:0000215!2.24e-11!57;CL:0000076!1.08e-09!62;CL:0000115!3.12e-09!35;CL:0000071!3.19e-09!18;CL:0002546!3.19e-09!18;CL:0002078!3.33e-08!44;CL:0000222!1.48e-07!119 | |ontology_enrichment_celltype=CL:0000066!4.23e-17!254;CL:0002139!1.05e-12!24;CL:0002321!1.61e-12!248;CL:0000220!2.61e-12!246;CL:0000213!2.24e-11!57;CL:0000215!2.24e-11!57;CL:0000076!1.08e-09!62;CL:0000115!3.12e-09!35;CL:0000071!3.19e-09!18;CL:0002546!3.19e-09!18;CL:0002078!3.33e-08!44;CL:0000222!1.48e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.05e-12;24!CL:0000071;3.19e-09;18!CL:0000115;2.42e-08;36!CL:0000213;2.48e-07;58!CL:0000215;2.48e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.49e-17,253;CL:0002321,7.37e-13,250;CL:0002139,1.05e-12,24;CL:0000213,8.26e-12,58;CL:0000215,8.26e-12,58;CL:0000115,1.10e-09,36;CL:0000076,1.14e-09,63;CL:0000071,3.19e-09,18;CL:0002546,3.19e-09,18;CL:0002078,1.29e-08,45;CL:0000222,7.38e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;3.19e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@APP | |short_description=p1@APP | ||
}} | }} |
Latest revision as of 23:20, 17 September 2015
Short description: | p1@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000348990_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.49e-17 | 253 |
embryonic cell | 7.37e-13 | 250 |
endothelial cell of vascular tree | 1.05e-12 | 24 |
lining cell | 8.26e-12 | 58 |
barrier cell | 8.26e-12 | 58 |
endothelial cell | 1.10e-09 | 36 |
squamous epithelial cell | 1.14e-09 | 63 |
blood vessel endothelial cell | 3.19e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.19e-09 | 18 |
meso-epithelial cell | 1.29e-08 | 45 |
mesodermal cell | 7.38e-08 | 121 |