FFCP PHASE1:Hg19::chr1:39874999..39875038,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:39874999..39875038,+ to FFCP PHASE1:Hg19::chr1:39874999..39875038,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=643314 | |EntrezGene=643314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29111 | |HGNC=29111 | ||
|TSSclassifier=strong | |||
|UniProt=O94854 | |UniProt=O94854 | ||
|association_with_transcript=-137bp_to_NM_015038,uc009vvt.1_5end | |||
|cluster_id=chr1:39874999..39875038,+ | |||
|coexpression_cluster_id=C545 | |||
|description=CAGE_peak_5_at_KIAA0754_5end | |||
|id=chr1:39874999..39875038,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.34e-38;3!CL:0000047;2.16e-26;2!CL:0000128;5.91e-17;7!CL:0000126;5.91e-17;7!CL:0000127;5.91e-17;7!CL:0002319;1.41e-16;25!CL:0002174;1.51e-13;1!CL:0000501;1.51e-13;1!CL:0000243;2.65e-07;15!CL:0000125;2.65e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.62e-38,3;CL:0000128,6.41e-17,7;CL:0000126,6.41e-17,7;CL:0000127,6.41e-17,7;CL:0002453,6.41e-17,7;CL:0002319,1.47e-16,25;CL:0000047,7.64e-15,8;CL:0002174,2.07e-13,1;CL:0000501,2.07e-13,1;CL:0000243,2.73e-07,15;CL:0000125,2.73e-07,15;CL:0000030,2.73e-07,15;CL:0000339,2.73e-07,15;CL:0000133,3.92e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.55e-14;1!UBERON:0010122;1.16e-07;2!CL:0000133;2.09e-07;59!CL:0000339;2.65e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.51e-13;1!DOID:4549;1.51e-13;1!DOID:5861;1.51e-13;1!DOID:6496;1.51e-13;1!DOID:3347;1.51e-13;1!DOID:201;4.37e-09;6!DOID:0060100;4.37e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.10e-13,1;DOID:4549,1.10e-13,1;DOID:5861,1.10e-13,1;DOID:6496,1.10e-13,1;DOID:3347,1.83e-13,1;DOID:201,4.20e-09,6;DOID:0060100,4.20e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.51e-25!82;UBERON:0005743!2.56e-24!86;UBERON:0000073!7.31e-23!94;UBERON:0001016!7.31e-23!94;UBERON:0000955!3.20e-21!69;UBERON:0006238!3.20e-21!69;UBERON:0002020!1.31e-20!34;UBERON:0003528!1.31e-20!34;UBERON:0001869!1.83e-20!32;UBERON:0001893!2.51e-20!34;UBERON:0001049!1.56e-19!57;UBERON:0005068!1.56e-19!57;UBERON:0006241!1.56e-19!57;UBERON:0007135!1.56e-19!57;UBERON:0002791!1.82e-19!33;UBERON:0002780!2.55e-18!41;UBERON:0001890!2.55e-18!41;UBERON:0006240!2.55e-18!41;UBERON:0002616!3.89e-18!59;UBERON:0003080!1.12e-17!42;UBERON:0003075!3.87e-14!86;UBERON:0007284!3.87e-14!86;UBERON:0000956!2.50e-13!25;UBERON:0000203!2.50e-13!25;UBERON:0003056!4.42e-13!61;UBERON:0002346!5.57e-13!90;UBERON:0004121!4.91e-12!169;UBERON:0000924!2.21e-11!173;UBERON:0006601!2.21e-11!173;UBERON:0002619!6.28e-10!22;UBERON:0000033!9.42e-10!123;UBERON:0000153!2.35e-09!129;UBERON:0007811!2.35e-09!129;UBERON:0002308!3.85e-09!9;UBERON:0000125!3.85e-09!9;UBERON:0001950!4.44e-08!20;UBERON:0002420!2.69e-07!9;UBERON:0007245!2.69e-07!9;UBERON:0010009!2.69e-07!9;UBERON:0010011!2.69e-07!9;UBERON:0000454!2.69e-07!9;UBERON:0009663!3.37e-07!7;UBERON:0000025!3.80e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.55e-14;1!UBERON:0001785;7.55e-14;1!UBERON:0002464;7.55e-14;1!UBERON:0004904;7.55e-14;1!UBERON:0001021;7.55e-14;1!UBERON:0002791;1.75e-13;32!UBERON:0001869;1.75e-13;32!UBERON:0001893;1.77e-13;34!UBERON:0003528;1.07e-12;34!UBERON:0002020;1.07e-12;34!UBERON:0000956;4.82e-12;25!UBERON:0000203;4.82e-12;25!UBERON:0002780;1.60e-08;41!UBERON:0001890;1.60e-08;41!UBERON:0001873;1.16e-07;2!UBERON:0003714;1.45e-07;2!UBERON:0005162;1.45e-07;2!UBERON:0000122;1.45e-07;2!UBERON:0001017;2.93e-07;75!UBERON:0000955;3.54e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.59e-15,89;UBERON:0001017,5.98e-14,81;UBERON:0000941,6.65e-14,1;UBERON:0001785,6.65e-14,1;UBERON:0002464,6.65e-14,1;UBERON:0004904,6.65e-14,1;UBERON:0001021,6.65e-14,1;UBERON:0003902,6.65e-14,1;UBERON:0005425,6.65e-14,1;UBERON:0002791,2.23e-13,32;UBERON:0001869,2.23e-13,32;UBERON:0003528,1.35e-12,34;UBERON:0002020,1.35e-12,34;UBERON:0001893,1.35e-12,34;UBERON:0000956,5.05e-12,25;UBERON:0000203,5.05e-12,25;UBERON:0002780,1.93e-10,41;UBERON:0001890,1.93e-10,41;UBERON:0003080,1.93e-10,41;UBERON:0006240,1.93e-10,41;UBERON:0003056,2.44e-09,61;UBERON:0000955,3.32e-08,68;UBERON:0006238,3.32e-08,68;UBERON:0000073,4.85e-08,53;UBERON:0002616,4.85e-08,53;UBERON:0001873,1.20e-07,2;UBERON:0010122,1.20e-07,2;UBERON:0001049,1.35e-07,56;UBERON:0005068,1.35e-07,56;UBERON:0006241,1.35e-07,56;UBERON:0007135,1.35e-07,56;UBERON:0003714,1.36e-07,2;UBERON:0005162,1.36e-07,2;UBERON:0000122,1.36e-07,2;UBERON:0004121,2.38e-07,171;UBERON:0000924,2.38e-07,171;UBERON:0006601,2.38e-07,171;UBERON:0003075,8.13e-07,82;UBERON:0007284,8.13e-07,82 | |||
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| ||
|short_description=p5@KIAA0754 | |||
}} | }} |
Latest revision as of 23:52, 17 September 2015
Short description: | p5@KIAA0754 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KIAA0754_5end |
Coexpression cluster: | C545_Astrocyte_Neural_Neurons_parietal_neuroectodermal_occipital_temporal |
Association with transcript: | -137bp_to_NM_015038, uc009vvt.1_5end |
EntrezGene: | KIAA0754 |
HGNC: | 29111 |
UniProt: | O94854 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.62e-38 | 3 |
oligodendrocyte | 6.41e-17 | 7 |
macroglial cell | 6.41e-17 | 7 |
astrocyte | 6.41e-17 | 7 |
oligodendrocyte precursor cell | 6.41e-17 | 7 |
neural cell | 1.47e-16 | 25 |
neuronal stem cell | 7.64e-15 | 8 |
follicular cell of ovary | 2.07e-13 | 1 |
granulosa cell | 2.07e-13 | 1 |
glial cell (sensu Vertebrata) | 2.73e-07 | 15 |
glial cell | 2.73e-07 | 15 |
glioblast | 2.73e-07 | 15 |
glioblast (sensu Vertebrata) | 2.73e-07 | 15 |
neurectodermal cell | 3.92e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.10e-13 | 1 |
extraosseous chondrosarcoma | 1.10e-13 | 1 |
myxoid chondrosarcoma | 1.10e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 1.10e-13 | 1 |
osteosarcoma | 1.83e-13 | 1 |
connective tissue cancer | 4.20e-09 | 6 |
musculoskeletal system cancer | 4.20e-09 | 6 |