FFCP PHASE1:Hg19::chr12:51984970..51984984,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6334 | |EntrezGene=6334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10596 | |HGNC=10596 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQD0 | |UniProt=Q9UQD0 | ||
|association_with_transcript=-35bp_to_ENST00000354534,NM_014191,uc001ryw.2_5end | |association_with_transcript=-35bp_to_ENST00000354534,NM_014191,uc001ryw.2_5end | ||
|cluster_id=chr12:51984970..51984984,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_SCN8A_5end | |description=CAGE_peak_3_at_SCN8A_5end | ||
|id=chr12:51984970..51984984,+ | |id=chr12:51984970..51984984,+ | ||
|ontology_enrichment_celltype=CL:0002620!2.27e-12!23;CL:0000057!1.92e-10!75;CL:0000055!3.49e-08!180 | |ontology_enrichment_celltype=CL:0002620!2.27e-12!23;CL:0000057!1.92e-10!75;CL:0000055!3.49e-08!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.89e-13;82!UBERON:0010122;2.44e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;8.84e-71;22!UBERON:0001869;1.45e-69;32!UBERON:0003528;3.42e-68;34!UBERON:0002020;3.42e-68;34!UBERON:0002791;7.01e-65;32!UBERON:0001950;5.06e-64;20!UBERON:0001893;8.32e-63;34!UBERON:0000956;6.58e-62;25!UBERON:0000203;6.58e-62;25!UBERON:0002780;5.45e-49;41!UBERON:0001890;5.45e-49;41!UBERON:0000073;1.71e-43;53!UBERON:0002616;1.71e-43;53!UBERON:0000955;8.23e-35;68!UBERON:0001017;4.08e-31;75!UBERON:0001016;1.01e-23;83!UBERON:0000200;1.11e-21;6!UBERON:0000349;2.68e-18;5!UBERON:0002420;3.29e-18;9!UBERON:0007245;3.29e-18;9!UBERON:0010009;3.29e-18;9!UBERON:0010011;3.29e-18;9!UBERON:0000454;3.29e-18;9!UBERON:0001872;4.15e-18;5!UBERON:0001871;4.24e-18;6!UBERON:0002021;9.08e-18;5!UBERON:0000125;9.32e-18;9!UBERON:0002308;9.32e-18;9!UBERON:0002298;5.86e-14;6!UBERON:0000369;1.10e-13;4!UBERON:0002435;1.10e-13;4!UBERON:0000204;1.10e-13;4!UBERON:0007023;2.33e-13;114!UBERON:0004733;7.84e-13;12!UBERON:0002028;7.84e-13;12!UBERON:0009663;4.70e-12;7!UBERON:0004732;9.09e-12;13!UBERON:0001870;9.23e-12;3!UBERON:0000988;3.55e-11;3!UBERON:0005383;1.87e-10;3!UBERON:0005382;1.87e-10;3!UBERON:0011216;1.45e-09;132!UBERON:0002680;2.38e-09;9!UBERON:0001895;2.38e-09;9!UBERON:0001876;1.90e-08;2!UBERON:0002702;2.01e-08;2!UBERON:0001954;2.53e-08;2!UBERON:0003022;2.53e-08;2!UBERON:0002421;2.53e-08;2!UBERON:0002600;2.53e-08;2!UBERON:0002771;3.02e-08;2!UBERON:0002148;7.76e-08;2!UBERON:0006331;7.76e-08;2!UBERON:0009662;7.76e-08;2!UBERON:0010314;1.78e-07;132!UBERON:0001873;2.44e-07;2 | |||
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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.298897361103602,1.05691048779388,1.29498355494505,0.561803226808994,0,0,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0.89694817844431,1.06778694409284,0.423863802319124,1.20036438433761,0.412210116953756,0.772921620136887,0,1.0126579934476,0.584622030967192,1.7670364197088,0.552299391853796,0.161646056818812,0.355009592516614,0.604512589365842,0.339121184620975,0,0,0,0.731842236777572,0.132529768321485,0.348581828608555,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,1.44375896333917,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.797814349754612,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0.473107245101804,0,0,0,1.03473071292505,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.280660094433074,0.128139149255701,0,0.64341568457443,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94147647766298,3.37606599385231,0.445234820091624,0.329607748453519,0.422250816255987,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,2.90799823828566,3.8034920246359,3.99227596002388,0,0,0,0,0,0,0,0.583209226766509,0.694499979733169,1.77148277162768,1.32656082487949,0,2.54332297841817,1.47773809476774,5.48463492884931,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0.269604531922708,0,2.81117334870407,0,0,0,0,0,1.83643656978294,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,4.68499890073502,0,0.240476460754601,0.213452994739353,0,0,0,2.23073497220554,0,0,0,0,0,0,0,4.20294202096853,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0.0984274815147488,0,11.1332156573302,2.99647493445466,0.321506296930038,0.550157746388935,0,0,0,5.1637123159321,0,0,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.340776043570843,0.113312091520126,0,0,4.13705460356962,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,6.46739203980405,3.254964198369,0,1.22021956690538,1.17983165588629,0.415045904808692,0,0,0,0,0.468334905806882,1.01444720027578,0,0.233713309847224,0,0,0.50313580350515,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0.449803112163605,0.465788870628778,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0.813741466409323,0,0.107410557042488,0,0.796191777397232,0,0.686791410365586,0,0,0,0.214441591374926,0,0.906823702049089,0,0,0,0,0,0.176689145945881,0,0,0,0,0,2.35039341457942,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.383683113910955,0.754773679776773,0,0.982886743728125,0,0,0.123935764259002,0,0.318004350653419,0,0,0.352675943690684,0,3.91798273088403,2.8339315265117,2.07524016774297,6.76884001994492,2.26864526599546,4.01112064292464,2.74508597574147,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,4.9977812617612,7.81078098613847,2.06686796501184,4.81960157473692,2.18789923607288,0,0,0,0,1.07140367175657,0,0.606965604236632,0.682986574053893,0.0887023701626388,0,0.171488009437418,4.68991157540139,5.85377684709357,0,0.444925607568277,0.078493092850514,2.19961825882403,0,0,0,0,0.0714765441766563,0.790068058663633,0,0,0,0,0,0,0,0.828324005113957,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.596852325484105,0.356760272332706,0.11294608203896,1.97892930141772,0.15096284356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| ||
|short_description=p3@SCN8A | |short_description=p3@SCN8A | ||
}} | }} |
Latest revision as of 20:24, 18 September 2015
Short description: | p3@SCN8A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCN8A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -35bp_to_ENST00000354534, NM_014191, uc001ryw.2_5end |
EntrezGene: | SCN8A |
HGNC: | 10596 |
UniProt: | Q9UQD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data