FFCP PHASE1:Hg19::chr15:71228863..71228879,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:71228863..71228879,+ to FFCP PHASE1:Hg19::chr15:71228863..71228879,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54839 | |EntrezGene=54839 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25965 | |HGNC=25965 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558808,ENST00000559069,ENST00000559806,ENST00000560158_5end | |||
|cluster_id=chr15:71228863..71228879,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_10_at_LRRC49_5end | |||
|id=chr15:71228863..71228879,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;4.56e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.56e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.05e-15;3!UBERON:0006222;1.40e-12;1!UBERON:0006601;2.15e-09;82 | |||
|ontology_enrichment_disease=DOID:114!5.58e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.28e-85!57;UBERON:0005068!6.28e-85!57;UBERON:0006241!6.28e-85!57;UBERON:0007135!6.28e-85!57;UBERON:0002616!2.08e-69!59;UBERON:0003075!5.31e-68!86;UBERON:0007284!5.31e-68!86;UBERON:0002346!1.05e-67!90;UBERON:0001017!1.59e-67!82;UBERON:0005743!4.02e-67!86;UBERON:0000073!1.62e-62!94;UBERON:0001016!1.62e-62!94;UBERON:0002780!2.73e-62!41;UBERON:0001890!2.73e-62!41;UBERON:0006240!2.73e-62!41;UBERON:0007023!2.71e-61!115;UBERON:0003080!1.22e-60!42;UBERON:0000955!2.26e-60!69;UBERON:0006238!2.26e-60!69;UBERON:0002020!5.11e-44!34;UBERON:0003528!5.11e-44!34;UBERON:0001893!2.17e-43!34;UBERON:0001869!1.54e-42!32;UBERON:0003056!2.20e-42!61;UBERON:0002791!6.40e-41!33;UBERON:0001950!1.08e-37!20;UBERON:0000924!1.01e-35!173;UBERON:0006601!1.01e-35!173;UBERON:0004121!4.82e-35!169;UBERON:0002619!5.02e-34!22;UBERON:0000033!1.40e-31!123;UBERON:0000153!1.20e-29!129;UBERON:0007811!1.20e-29!129;UBERON:0000956!1.39e-29!25;UBERON:0000203!1.39e-29!25;UBERON:0000025!2.91e-25!194;UBERON:0003076!3.37e-24!15;UBERON:0003057!3.37e-24!15;UBERON:0001894!3.97e-22!7;UBERON:0006222!3.97e-22!7;UBERON:0004111!4.44e-19!241;UBERON:0000483!9.04e-17!309;UBERON:0000119!1.73e-16!312;UBERON:0004733!1.86e-16!12;UBERON:0002028!1.86e-16!12;UBERON:0007277!1.86e-16!12;UBERON:0002308!5.03e-16!9;UBERON:0000125!5.03e-16!9;UBERON:0002021!1.47e-15!5;UBERON:0004732!4.50e-15!13;UBERON:0002298!1.80e-14!8;UBERON:0000477!3.11e-14!286;UBERON:0003296!1.17e-13!4;UBERON:0010133!1.17e-13!4;UBERON:0001871!4.59e-13!7;UBERON:0000200!1.97e-12!6;UBERON:0000064!2.56e-12!219;UBERON:0000369!2.82e-12!4;UBERON:0002435!2.82e-12!4;UBERON:0000204!2.82e-12!4;UBERON:0010082!2.82e-12!4;UBERON:0002420!1.32e-11!9;UBERON:0007245!1.32e-11!9;UBERON:0010009!1.32e-11!9;UBERON:0010011!1.32e-11!9;UBERON:0000454!1.32e-11!9;UBERON:0000988!5.64e-11!3;UBERON:0009663!1.68e-10!7;UBERON:0001872!2.37e-10!5;UBERON:0001896!2.61e-10!3;UBERON:0005290!2.61e-10!3;UBERON:0010096!2.61e-10!3;UBERON:0002240!3.35e-10!3;UBERON:0000062!1.06e-09!511;UBERON:0005383!1.21e-09!3;UBERON:0005382!1.21e-09!3;UBERON:0002771!1.41e-09!3;UBERON:0002680!3.49e-09!9;UBERON:0001895!3.49e-09!9;UBERON:0010092!3.49e-09!9;UBERON:0000475!3.56e-09!365;UBERON:0000481!6.11e-09!347;UBERON:0001905!4.97e-08!2;UBERON:0002757!4.97e-08!2;UBERON:0010134!4.97e-08!2;UBERON:0002784!4.97e-08!2;UBERON:0005408!4.97e-08!2;UBERON:0001899!4.97e-08!2;UBERON:0002148!8.14e-08!2;UBERON:0009662!8.14e-08!2;UBERON:0000007!2.58e-07!2;UBERON:0001873!3.31e-07!2;UBERON:0010122!3.31e-07!2;UBERON:0001897!4.37e-07!2;UBERON:0000467!4.87e-07!625;UBERON:0000480!5.26e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;6.38e-34;3!UBERON:0004733;1.78e-32;12!UBERON:0002028;1.78e-32;12!UBERON:0002680;1.92e-30;9!UBERON:0001895;1.92e-30;9!UBERON:0004732;5.81e-30;13!UBERON:0002298;1.11e-29;6!UBERON:0002784;4.94e-26;4!UBERON:0001894;5.05e-26;7!UBERON:0001905;8.01e-24;2!UBERON:0002757;8.01e-24;2!UBERON:0010134;8.01e-24;2!UBERON:0005408;8.01e-24;2!UBERON:0001899;8.01e-24;2!UBERON:0002148;4.89e-23;2!UBERON:0006331;4.89e-23;2!UBERON:0009662;4.89e-23;2!UBERON:0000073;1.07e-16;53!UBERON:0002616;1.07e-16;53!UBERON:0000955;1.06e-12;68!UBERON:0002146;1.86e-12;1!UBERON:0005623;1.86e-12;1!UBERON:0003296;2.08e-12;4!UBERON:0010133;2.08e-12;4!UBERON:0001301;3.44e-12;1!UBERON:0000125;1.41e-11;9!UBERON:0002308;1.41e-11;9!UBERON:0001016;3.05e-10;83!UBERON:0002780;1.53e-09;41!UBERON:0001890;1.53e-09;41!UBERON:0001017;2.63e-09;75!UBERON:0007023;2.97e-09;114!UBERON:0002037;3.63e-08;6!UBERON:0001897;7.40e-07;2!UBERON:0010225;7.40e-07;2!UBERON:0003528;8.59e-07;34!UBERON:0002020;8.59e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.31e-36,56;UBERON:0005068,5.31e-36,56;UBERON:0006241,5.31e-36,56;UBERON:0007135,5.31e-36,56;UBERON:0003076,5.42e-35,15;UBERON:0003057,5.42e-35,15;UBERON:0000988,5.40e-34,3;UBERON:0000073,8.77e-33,53;UBERON:0002616,8.77e-33,53;UBERON:0004733,1.94e-32,12;UBERON:0002028,1.94e-32,12;UBERON:0007277,1.94e-32,12;UBERON:0002680,2.38e-30,9;UBERON:0001895,2.38e-30,9;UBERON:0010092,2.38e-30,9;UBERON:0004732,6.27e-30,13;UBERON:0002298,8.59e-30,6;UBERON:0003075,6.36e-28,82;UBERON:0007284,6.36e-28,82;UBERON:0002346,1.50e-26,86;UBERON:0002784,4.74e-26,4;UBERON:0001894,4.89e-26,7;UBERON:0006222,4.89e-26,7;UBERON:0000955,6.69e-25,68;UBERON:0006238,6.69e-25,68;UBERON:0001017,3.74e-24,81;UBERON:0001905,8.02e-24,2;UBERON:0002757,8.02e-24,2;UBERON:0010134,8.02e-24,2;UBERON:0005408,8.02e-24,2;UBERON:0001899,8.02e-24,2;UBERON:0002148,4.37e-23,2;UBERON:0006331,4.37e-23,2;UBERON:0009662,4.37e-23,2;UBERON:0007023,1.02e-22,114;UBERON:0010371,1.16e-21,104;UBERON:0001016,1.31e-21,89;UBERON:0010314,1.12e-16,132;UBERON:0002146,1.57e-12,1;UBERON:0005623,1.57e-12,1;UBERON:0000025,1.60e-12,192;UBERON:0002780,1.95e-12,41;UBERON:0001890,1.95e-12,41;UBERON:0003080,1.95e-12,41;UBERON:0006240,1.95e-12,41;UBERON:0003296,2.08e-12,4;UBERON:0010133,2.08e-12,4;UBERON:0004121,2.97e-12,171;UBERON:0000924,2.97e-12,171;UBERON:0006601,2.97e-12,171;UBERON:0001301,3.85e-12,1;UBERON:0000125,1.22e-11,9;UBERON:0002308,1.22e-11,9;UBERON:0004111,1.40e-09,240;UBERON:0011216,6.58e-09,223;UBERON:0003056,3.28e-08,61;UBERON:0000483,3.38e-08,306;UBERON:0000119,4.28e-08,309;UBERON:0002037,4.35e-08,6;UBERON:0006215,4.35e-08,6;UBERON:0003528,7.67e-08,34;UBERON:0002020,7.67e-08,34;UBERON:0001897,7.20e-07,2;UBERON:0010225,7.20e-07,2;UBERON:0001873,8.52e-07,2;UBERON:0010122,8.52e-07,2 | |||
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| ||
|short_description=p10@LRRC49 | |||
}} | }} |
Latest revision as of 21:07, 18 September 2015
Short description: | p10@LRRC49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LRRC49_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000558808, ENST00000559069, ENST00000559806, ENST00000560158_5end |
EntrezGene: | LRRC49 |
HGNC: | 25965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.56e-07 | 2 |