FFCP PHASE1:Hg19::chr7:54610086..54610123,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222008 | |EntrezGene=222008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |HGNC=28499 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCX6 | |UniProt=B5MCX6 | ||
|association_with_transcript=0bp_to_ENST00000404951_5end | |association_with_transcript=0bp_to_ENST00000404951_5end | ||
|cluster_id=chr7:54610086..54610123,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_VSTM2A_5end | |description=CAGE_peak_2_at_VSTM2A_5end | ||
|id=chr7:54610086..54610123,+ | |id=chr7:54610086..54610123,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.01e-18;82!UBERON:0006241;5.41e-10;3!UBERON:0003057;5.41e-10;3!UBERON:0010122;1.49e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;3.04e-08;6!DOID:171;2.83e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.16e-08,6;DOID:171,3.06e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.49e-76!57;UBERON:0005068!1.49e-76!57;UBERON:0006241!1.49e-76!57;UBERON:0007135!1.49e-76!57;UBERON:0000073!7.59e-71!94;UBERON:0001016!7.59e-71!94;UBERON:0001017!1.48e-69!82;UBERON:0005743!2.62e-68!86;UBERON:0002780!7.03e-68!41;UBERON:0001890!7.03e-68!41;UBERON:0006240!7.03e-68!41;UBERON:0003080!5.05e-66!42;UBERON:0002616!1.55e-63!59;UBERON:0001893!2.18e-62!34;UBERON:0002020!3.17e-62!34;UBERON:0003528!3.17e-62!34;UBERON:0000955!2.23e-60!69;UBERON:0006238!2.23e-60!69;UBERON:0002791!3.86e-60!33;UBERON:0001869!7.77e-59!32;UBERON:0003075!2.96e-53!86;UBERON:0007284!2.96e-53!86;UBERON:0002346!1.63e-52!90;UBERON:0007023!2.03e-47!115;UBERON:0002619!3.63e-47!22;UBERON:0003056!1.14e-44!61;UBERON:0000956!2.31e-44!25;UBERON:0000203!2.31e-44!25;UBERON:0001950!5.64e-43!20;UBERON:0000924!2.17e-35!173;UBERON:0006601!2.17e-35!173;UBERON:0004121!3.52e-35!169;UBERON:0000033!9.21e-33!123;UBERON:0000153!1.35e-30!129;UBERON:0007811!1.35e-30!129;UBERON:0002420!1.19e-19!9;UBERON:0007245!1.19e-19!9;UBERON:0010009!1.19e-19!9;UBERON:0010011!1.19e-19!9;UBERON:0000454!1.19e-19!9;UBERON:0002308!5.52e-19!9;UBERON:0000125!5.52e-19!9;UBERON:0000025!9.09e-17!194;UBERON:0009663!3.52e-15!7;UBERON:0000200!7.96e-15!6;UBERON:0001871!1.35e-14!7;UBERON:0002021!1.30e-12!5;UBERON:0001872!2.37e-12!5;UBERON:0000349!2.37e-12!5;UBERON:0003076!2.42e-12!15;UBERON:0003057!2.42e-12!15;UBERON:0004111!3.02e-12!241;UBERON:0002298!4.32e-12!8;UBERON:0000064!1.34e-11!219;UBERON:0000369!6.59e-10!4;UBERON:0002435!6.59e-10!4;UBERON:0000204!6.59e-10!4;UBERON:0010082!6.59e-10!4;UBERON:0004732!3.99e-09!13;UBERON:0000477!6.96e-09!286;UBERON:0000483!2.50e-08!309;UBERON:0000062!3.55e-08!511;UBERON:0002771!3.94e-08!3;UBERON:0000119!4.01e-08!312;UBERON:0000475!6.24e-08!365;UBERON:0000922!6.98e-08!612;UBERON:0005383!7.86e-08!3;UBERON:0005382!7.86e-08!3;UBERON:0004733!1.24e-07!12;UBERON:0002028!1.24e-07!12;UBERON:0007277!1.24e-07!12;UBERON:0001894!1.65e-07!7;UBERON:0006222!1.65e-07!7;UBERON:0002240!1.89e-07!3;UBERON:0000988!3.26e-07!3;UBERON:0000923!3.27e-07!604;UBERON:0005291!3.27e-07!604;UBERON:0006598!3.27e-07!604;UBERON:0002532!3.27e-07!604;UBERON:0000481!3.27e-07!347;UBERON:0002050!3.63e-07!605;UBERON:0005423!3.63e-07!605;UBERON:0006331!4.70e-07!3;UBERON:0001896!7.82e-07!3;UBERON:0005290!7.82e-07!3;UBERON:0010096!7.82e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.49e-76!57;UBERON:0005068!1.49e-76!57;UBERON:0006241!1.49e-76!57;UBERON:0007135!1.49e-76!57;UBERON:0000073!7.59e-71!94;UBERON:0001016!7.59e-71!94;UBERON:0001017!1.48e-69!82;UBERON:0005743!2.62e-68!86;UBERON:0002780!7.03e-68!41;UBERON:0001890!7.03e-68!41;UBERON:0006240!7.03e-68!41;UBERON:0003080!5.05e-66!42;UBERON:0002616!1.55e-63!59;UBERON:0001893!2.18e-62!34;UBERON:0002020!3.17e-62!34;UBERON:0003528!3.17e-62!34;UBERON:0000955!2.23e-60!69;UBERON:0006238!2.23e-60!69;UBERON:0002791!3.86e-60!33;UBERON:0001869!7.77e-59!32;UBERON:0003075!2.96e-53!86;UBERON:0007284!2.96e-53!86;UBERON:0002346!1.63e-52!90;UBERON:0007023!2.03e-47!115;UBERON:0002619!3.63e-47!22;UBERON:0003056!1.14e-44!61;UBERON:0000956!2.31e-44!25;UBERON:0000203!2.31e-44!25;UBERON:0001950!5.64e-43!20;UBERON:0000924!2.17e-35!173;UBERON:0006601!2.17e-35!173;UBERON:0004121!3.52e-35!169;UBERON:0000033!9.21e-33!123;UBERON:0000153!1.35e-30!129;UBERON:0007811!1.35e-30!129;UBERON:0002420!1.19e-19!9;UBERON:0007245!1.19e-19!9;UBERON:0010009!1.19e-19!9;UBERON:0010011!1.19e-19!9;UBERON:0000454!1.19e-19!9;UBERON:0002308!5.52e-19!9;UBERON:0000125!5.52e-19!9;UBERON:0000025!9.09e-17!194;UBERON:0009663!3.52e-15!7;UBERON:0000200!7.96e-15!6;UBERON:0001871!1.35e-14!7;UBERON:0002021!1.30e-12!5;UBERON:0001872!2.37e-12!5;UBERON:0000349!2.37e-12!5;UBERON:0003076!2.42e-12!15;UBERON:0003057!2.42e-12!15;UBERON:0004111!3.02e-12!241;UBERON:0002298!4.32e-12!8;UBERON:0000064!1.34e-11!219;UBERON:0000369!6.59e-10!4;UBERON:0002435!6.59e-10!4;UBERON:0000204!6.59e-10!4;UBERON:0010082!6.59e-10!4;UBERON:0004732!3.99e-09!13;UBERON:0000477!6.96e-09!286;UBERON:0000483!2.50e-08!309;UBERON:0000062!3.55e-08!511;UBERON:0002771!3.94e-08!3;UBERON:0000119!4.01e-08!312;UBERON:0000475!6.24e-08!365;UBERON:0000922!6.98e-08!612;UBERON:0005383!7.86e-08!3;UBERON:0005382!7.86e-08!3;UBERON:0004733!1.24e-07!12;UBERON:0002028!1.24e-07!12;UBERON:0007277!1.24e-07!12;UBERON:0001894!1.65e-07!7;UBERON:0006222!1.65e-07!7;UBERON:0002240!1.89e-07!3;UBERON:0000988!3.26e-07!3;UBERON:0000923!3.27e-07!604;UBERON:0005291!3.27e-07!604;UBERON:0006598!3.27e-07!604;UBERON:0002532!3.27e-07!604;UBERON:0000481!3.27e-07!347;UBERON:0002050!3.63e-07!605;UBERON:0005423!3.63e-07!605;UBERON:0006331!4.70e-07!3;UBERON:0001896!7.82e-07!3;UBERON:0005290!7.82e-07!3;UBERON:0010096!7.82e-07!3 | ||
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| ||
|short_description=p2@VSTM2A | |short_description=p2@VSTM2A | ||
}} | }} |
Latest revision as of 00:02, 19 September 2015
Short description: | p2@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VSTM2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000404951_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | B5MCX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.16e-08 | 6 |
neuroectodermal tumor | 3.06e-07 | 10 |