FFCP PHASE1:Hg19::chr5:87969130..87969153,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=645323 | |EntrezGene=645323 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42810 | |HGNC=42810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505030,NR_024384_5end | |association_with_transcript=0bp_to_ENST00000505030,NR_024384_5end | ||
|cluster_id=chr5:87969130..87969153,- | |||
|coexpression_cluster_id=C561 | |||
|description=CAGE_peak_1_at_LINC00461_5end | |description=CAGE_peak_1_at_LINC00461_5end | ||
|id=chr5:87969130..87969153,- | |id=chr5:87969130..87969153,- | ||
|ontology_enrichment_celltype=CL:0002319!2.35e-13!25;CL:0000128!2.04e-09!7;CL:0000126!2.04e-09!7;CL:0000127!2.04e-09!7;CL:0002453!2.04e-09!7;CL:0000133!1.75e-08!59;CL:0000095!4.99e-08!17;CL:0000123!4.99e-08!17;CL:0000243!5.60e-08!15;CL:0000125!5.60e-08!15;CL:0000030!5.60e-08!15;CL:0000339!5.60e-08!15;CL:0000047!3.09e-07!8 | |ontology_enrichment_celltype=CL:0002319!2.35e-13!25;CL:0000128!2.04e-09!7;CL:0000126!2.04e-09!7;CL:0000127!2.04e-09!7;CL:0002453!2.04e-09!7;CL:0000133!1.75e-08!59;CL:0000095!4.99e-08!17;CL:0000123!4.99e-08!17;CL:0000243!5.60e-08!15;CL:0000125!5.60e-08!15;CL:0000030!5.60e-08!15;CL:0000339!5.60e-08!15;CL:0000047!3.09e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000128;2.29e-13;7!CL:0000126;2.29e-13;7!CL:0000127;2.29e-13;7!CL:0002319;1.11e-12;25!CL:0000095;6.90e-08;17!CL:0000243;1.64e-07;15!CL:0000125;1.64e-07;15!CL:0002605;3.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.38e-13,7;CL:0000126,2.38e-13,7;CL:0000127,2.38e-13,7;CL:0002453,2.38e-13,7;CL:0002319,1.15e-12,25;CL:0000095,7.05e-08,17;CL:0000123,7.05e-08,17;CL:0000243,1.66e-07,15;CL:0000125,1.66e-07,15;CL:0000030,1.66e-07,15;CL:0000339,1.66e-07,15;CL:0002605,3.04e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-14;82!CL:0000339;1.64e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.92e-67!82;UBERON:0005743!4.39e-65!86;UBERON:0000073!4.71e-65!94;UBERON:0001016!4.71e-65!94;UBERON:0000955!9.90e-56!69;UBERON:0006238!9.90e-56!69;UBERON:0001049!4.73e-55!57;UBERON:0005068!4.73e-55!57;UBERON:0006241!4.73e-55!57;UBERON:0007135!4.73e-55!57;UBERON:0002616!4.41e-53!59;UBERON:0002346!3.16e-45!90;UBERON:0003075!4.47e-42!86;UBERON:0007284!4.47e-42!86;UBERON:0002780!1.67e-39!41;UBERON:0001890!1.67e-39!41;UBERON:0006240!1.67e-39!41;UBERON:0007023!1.01e-38!115;UBERON:0003080!3.22e-38!42;UBERON:0001893!2.55e-37!34;UBERON:0002020!3.69e-37!34;UBERON:0003528!3.69e-37!34;UBERON:0002791!3.93e-36!33;UBERON:0001869!3.24e-35!32;UBERON:0000924!4.42e-33!173;UBERON:0006601!4.42e-33!173;UBERON:0004121!1.63e-30!169;UBERON:0003056!5.82e-30!61;UBERON:0000033!6.98e-29!123;UBERON:0000956!1.50e-27!25;UBERON:0000203!1.50e-27!25;UBERON:0000153!2.34e-27!129;UBERON:0007811!2.34e-27!129;UBERON:0002619!8.14e-24!22;UBERON:0001950!1.32e-21!20;UBERON:0003076!1.64e-17!15;UBERON:0003057!1.64e-17!15;UBERON:0004732!3.89e-15!13;UBERON:0004733!2.92e-14!12;UBERON:0002028!2.92e-14!12;UBERON:0007277!2.92e-14!12;UBERON:0002680!3.24e-11!9;UBERON:0001895!3.24e-11!9;UBERON:0010092!3.24e-11!9;UBERON:0002308!6.05e-11!9;UBERON:0000125!6.05e-11!9;UBERON:0002420!7.15e-11!9;UBERON:0007245!7.15e-11!9;UBERON:0010009!7.15e-11!9;UBERON:0010011!7.15e-11!9;UBERON:0000454!7.15e-11!9;UBERON:0000025!1.66e-09!194;UBERON:0009663!7.32e-09!7;UBERON:0002037!3.37e-08!6;UBERON:0006215!3.37e-08!6;UBERON:0000200!7.44e-08!6;UBERON:0001871!1.07e-07!7;UBERON:0002298!2.45e-07!8;UBERON:0002021!3.87e-07!5;UBERON:0000349!5.54e-07!5;UBERON:0001872!5.96e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.46e-48;34!UBERON:0001869;1.93e-47;32!UBERON:0003528;2.07e-47;34!UBERON:0002020;2.07e-47;34!UBERON:0002791;3.18e-47;32!UBERON:0000073;3.86e-44;53!UBERON:0002616;3.86e-44;53!UBERON:0002780;2.44e-42;41!UBERON:0001890;2.44e-42;41!UBERON:0000956;6.08e-41;25!UBERON:0000203;6.08e-41;25!UBERON:0002619;2.60e-35;22!UBERON:0000955;3.62e-33;68!UBERON:0001017;7.60e-33;75!UBERON:0001950;5.83e-32;20!UBERON:0001016;1.49e-28;83!UBERON:0004732;6.79e-22;13!UBERON:0004733;1.39e-20;12!UBERON:0002028;1.39e-20;12!UBERON:0002680;4.89e-16;9!UBERON:0001895;4.89e-16;9!UBERON:0000125;1.15e-15;9!UBERON:0002308;1.15e-15;9!UBERON:0002420;1.52e-15;9!UBERON:0007245;1.52e-15;9!UBERON:0010009;1.52e-15;9!UBERON:0010011;1.52e-15;9!UBERON:0000454;1.52e-15;9!UBERON:0009663;1.55e-12;7!UBERON:0011216;1.39e-11;132!UBERON:0002037;1.62e-11;6!UBERON:0000200;5.59e-11;6!UBERON:0002298;9.56e-11;6!UBERON:0002021;5.96e-10;5!UBERON:0000349;1.00e-09;5!UBERON:0001872;1.15e-09;5!UBERON:0001871;1.72e-09;6!UBERON:0007023;5.54e-09;114!UBERON:0000369;3.87e-08;4!UBERON:0002435;3.87e-08;4!UBERON:0000204;3.87e-08;4!UBERON:0002784;6.13e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.30e-88,81;UBERON:0001049,4.52e-85,56;UBERON:0005068,4.52e-85,56;UBERON:0006241,4.52e-85,56;UBERON:0007135,4.52e-85,56;UBERON:0001016,6.81e-85,89;UBERON:0000073,8.80e-80,53;UBERON:0002616,8.80e-80,53;UBERON:0000955,3.67e-77,68;UBERON:0006238,3.67e-77,68;UBERON:0002346,1.65e-60,86;UBERON:0003075,1.01e-59,82;UBERON:0007284,1.01e-59,82;UBERON:0002780,1.60e-59,41;UBERON:0001890,1.60e-59,41;UBERON:0003080,1.60e-59,41;UBERON:0006240,1.60e-59,41;UBERON:0001893,1.12e-55,34;UBERON:0003528,1.96e-55,34;UBERON:0002020,1.96e-55,34;UBERON:0001869,1.68e-52,32;UBERON:0002791,3.63e-52,32;UBERON:0010371,4.10e-45,104;UBERON:0003056,1.38e-42,61;UBERON:0004121,1.31e-41,171;UBERON:0000924,1.31e-41,171;UBERON:0006601,1.31e-41,171;UBERON:0000956,6.21e-41,25;UBERON:0000203,6.21e-41,25;UBERON:0002619,2.68e-35,22;UBERON:0010314,3.65e-32,132;UBERON:0001950,5.75e-32,20;UBERON:0011216,3.48e-30,223;UBERON:0007023,7.89e-28,114;UBERON:0003076,1.63e-25,15;UBERON:0003057,1.63e-25,15;UBERON:0004732,6.11e-22,13;UBERON:0004733,1.27e-20,12;UBERON:0002028,1.27e-20,12;UBERON:0007277,1.27e-20,12;UBERON:0002680,4.76e-16,9;UBERON:0001895,4.76e-16,9;UBERON:0010092,4.76e-16,9;UBERON:0000125,1.22e-15,9;UBERON:0002308,1.22e-15,9;UBERON:0002420,1.56e-15,9;UBERON:0007245,1.56e-15,9;UBERON:0010009,1.56e-15,9;UBERON:0010011,1.56e-15,9;UBERON:0000454,1.56e-15,9;UBERON:0000025,1.22e-13,192;UBERON:0009663,1.62e-12,7;UBERON:0002037,1.59e-11,6;UBERON:0006215,1.59e-11,6;UBERON:0000200,5.21e-11,6;UBERON:0002298,8.91e-11,6;UBERON:0002021,6.13e-10,5;UBERON:0000349,1.05e-09,5;UBERON:0001872,1.17e-09,5;UBERON:0001871,1.75e-09,6;UBERON:0004111,3.45e-08,240;UBERON:0000369,3.94e-08,4;UBERON:0002435,3.94e-08,4;UBERON:0000204,3.94e-08,4;UBERON:0010082,3.94e-08,4;UBERON:0002784,6.29e-07,4 | |||
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|short_description=p1@LINC00461 | |short_description=p1@LINC00461 | ||
}} | }} |
Latest revision as of 03:05, 19 September 2015
Short description: | p1@LINC00461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00461_5end |
Coexpression cluster: | C561_brain_Neural_spinal_Neurons_parietal_temporal_occipital |
Association with transcript: | 0bp_to_ENST00000505030, NR_024384_5end |
EntrezGene: | LINC00461 |
HGNC: | 42810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.38e-13 | 7 |
macroglial cell | 2.38e-13 | 7 |
astrocyte | 2.38e-13 | 7 |
oligodendrocyte precursor cell | 2.38e-13 | 7 |
neural cell | 1.15e-12 | 25 |
neuron associated cell | 7.05e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 7.05e-08 | 17 |
glial cell (sensu Vertebrata) | 1.66e-07 | 15 |
glial cell | 1.66e-07 | 15 |
glioblast | 1.66e-07 | 15 |
glioblast (sensu Vertebrata) | 1.66e-07 | 15 |
astrocyte of the cerebral cortex | 3.04e-07 | 3 |