FFCP PHASE1:Hg19::chr5:87980660..87980676,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42810 | |HGNC=42810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000513805_5end | |association_with_transcript=-18bp_to_ENST00000513805_5end | ||
|cluster_id=chr5:87980660..87980676,- | |||
|coexpression_cluster_id=C755 | |coexpression_cluster_id=C755 | ||
|description=CAGE_peak_8_at_LINC00461_5end | |description=CAGE_peak_8_at_LINC00461_5end | ||
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|ontology_enrichment_celltype=CL:0000128!2.55e-14!7;CL:0000126!2.55e-14!7;CL:0000127!2.55e-14!7;CL:0002453!2.55e-14!7;CL:0002319!1.17e-12!25;CL:0002605!1.92e-09!3;CL:0002603!4.38e-09!3;CL:0000095!3.75e-08!17;CL:0000123!3.75e-08!17;CL:0000243!3.45e-07!15;CL:0000125!3.45e-07!15;CL:0000030!3.45e-07!15;CL:0000339!3.45e-07!15 | |ontology_enrichment_celltype=CL:0000128!2.55e-14!7;CL:0000126!2.55e-14!7;CL:0000127!2.55e-14!7;CL:0002453!2.55e-14!7;CL:0002319!1.17e-12!25;CL:0002605!1.92e-09!3;CL:0002603!4.38e-09!3;CL:0000095!3.75e-08!17;CL:0000123!3.75e-08!17;CL:0000243!3.45e-07!15;CL:0000125!3.45e-07!15;CL:0000030!3.45e-07!15;CL:0000339!3.45e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002605;1.63e-15;3!CL:0000047;1.42e-11;2!CL:0000128;1.46e-11;7!CL:0000126;1.46e-11;7!CL:0000127;1.46e-11;7!CL:0002319;9.41e-11;25 | |ontology_enrichment_celltype_v019=CL:0002605;1.63e-15;3!CL:0000047;1.42e-11;2!CL:0000128;1.46e-11;7!CL:0000126;1.46e-11;7!CL:0000127;1.46e-11;7!CL:0002319;9.41e-11;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.01e-15,3;CL:0000128,1.88e-11,7;CL:0000126,1.88e-11,7;CL:0000127,1.88e-11,7;CL:0002453,1.88e-11,7;CL:0002319,1.07e-10,25;CL:0000047,1.90e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.07e-17;3!UBERON:0006601;5.98e-08;82 | |ontology_enrichment_development_v019=UBERON:0006215;3.07e-17;3!UBERON:0006601;5.98e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.42e-105!57;UBERON:0005068!1.42e-105!57;UBERON:0006241!1.42e-105!57;UBERON:0007135!1.42e-105!57;UBERON:0001017!8.23e-105!82;UBERON:0005743!2.08e-99!86;UBERON:0002616!4.82e-93!59;UBERON:0000955!6.15e-92!69;UBERON:0006238!6.15e-92!69;UBERON:0000073!6.96e-89!94;UBERON:0001016!6.96e-89!94;UBERON:0001893!1.79e-79!34;UBERON:0002020!4.01e-79!34;UBERON:0003528!4.01e-79!34;UBERON:0002346!2.68e-77!90;UBERON:0002791!9.26e-77!33;UBERON:0003075!3.51e-75!86;UBERON:0007284!3.51e-75!86;UBERON:0001869!9.48e-75!32;UBERON:0002780!2.42e-73!41;UBERON:0001890!2.42e-73!41;UBERON:0006240!2.42e-73!41;UBERON:0003080!2.08e-71!42;UBERON:0000956!1.81e-61!25;UBERON:0000203!1.81e-61!25;UBERON:0002619!1.51e-53!22;UBERON:0000924!1.04e-51!173;UBERON:0006601!1.04e-51!173;UBERON:0000033!4.83e-51!123;UBERON:0004121!1.91e-49!169;UBERON:0003056!2.40e-49!61;UBERON:0001950!4.03e-48!20;UBERON:0000153!4.25e-48!129;UBERON:0007811!4.25e-48!129;UBERON:0007023!8.70e-36!115;UBERON:0003076!6.72e-34!15;UBERON:0003057!6.72e-34!15;UBERON:0004733!7.29e-32!12;UBERON:0002028!7.29e-32!12;UBERON:0007277!7.29e-32!12;UBERON:0004732!3.44e-29!13;UBERON:0002680!1.28e-24!9;UBERON:0001895!1.28e-24!9;UBERON:0010092!1.28e-24!9;UBERON:0000025!8.65e-24!194;UBERON:0002420!2.38e-19!9;UBERON:0007245!2.38e-19!9;UBERON:0010009!2.38e-19!9;UBERON:0010011!2.38e-19!9;UBERON:0000454!2.38e-19!9;UBERON:0002308!1.15e-18!9;UBERON:0000125!1.15e-18!9;UBERON:0001871!2.94e-18!7;UBERON:0000200!5.18e-18!6;UBERON:0002037!8.75e-18!6;UBERON:0006215!8.75e-18!6;UBERON:0004111!8.93e-17!241;UBERON:0002298!1.23e-15!8;UBERON:0000064!1.58e-15!219;UBERON:0002021!2.40e-15!5;UBERON:0000349!6.10e-15!5;UBERON:0000483!3.46e-14!309;UBERON:0009663!3.56e-14!7;UBERON:0000119!6.30e-14!312;UBERON:0000477!6.86e-14!286;UBERON:0000475!5.89e-13!365;UBERON:0002771!2.64e-10!3;UBERON:0001872!4.93e-10!5;UBERON:0001896!6.30e-09!3;UBERON:0005290!6.30e-09!3;UBERON:0010096!6.30e-09!3;UBERON:0000062!1.41e-08!511;UBERON:0000988!1.44e-08!3;UBERON:0006331!1.94e-08!3;UBERON:0000922!4.61e-08!612;UBERON:0000923!8.80e-08!604;UBERON:0005291!8.80e-08!604;UBERON:0006598!8.80e-08!604;UBERON:0002532!8.80e-08!604;UBERON:0002050!9.61e-08!605;UBERON:0005423!9.61e-08!605;UBERON:0000369!2.01e-07!4;UBERON:0002435!2.01e-07!4;UBERON:0000204!2.01e-07!4;UBERON:0010082!2.01e-07!4;UBERON:0001954!4.84e-07!2;UBERON:0003022!4.84e-07!2;UBERON:0002421!4.84e-07!2;UBERON:0002600!4.84e-07!2;UBERON:0001870!4.99e-07!2;UBERON:0001876!5.45e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!1.42e-105!57;UBERON:0005068!1.42e-105!57;UBERON:0006241!1.42e-105!57;UBERON:0007135!1.42e-105!57;UBERON:0001017!8.23e-105!82;UBERON:0005743!2.08e-99!86;UBERON:0002616!4.82e-93!59;UBERON:0000955!6.15e-92!69;UBERON:0006238!6.15e-92!69;UBERON:0000073!6.96e-89!94;UBERON:0001016!6.96e-89!94;UBERON:0001893!1.79e-79!34;UBERON:0002020!4.01e-79!34;UBERON:0003528!4.01e-79!34;UBERON:0002346!2.68e-77!90;UBERON:0002791!9.26e-77!33;UBERON:0003075!3.51e-75!86;UBERON:0007284!3.51e-75!86;UBERON:0001869!9.48e-75!32;UBERON:0002780!2.42e-73!41;UBERON:0001890!2.42e-73!41;UBERON:0006240!2.42e-73!41;UBERON:0003080!2.08e-71!42;UBERON:0000956!1.81e-61!25;UBERON:0000203!1.81e-61!25;UBERON:0002619!1.51e-53!22;UBERON:0000924!1.04e-51!173;UBERON:0006601!1.04e-51!173;UBERON:0000033!4.83e-51!123;UBERON:0004121!1.91e-49!169;UBERON:0003056!2.40e-49!61;UBERON:0001950!4.03e-48!20;UBERON:0000153!4.25e-48!129;UBERON:0007811!4.25e-48!129;UBERON:0007023!8.70e-36!115;UBERON:0003076!6.72e-34!15;UBERON:0003057!6.72e-34!15;UBERON:0004733!7.29e-32!12;UBERON:0002028!7.29e-32!12;UBERON:0007277!7.29e-32!12;UBERON:0004732!3.44e-29!13;UBERON:0002680!1.28e-24!9;UBERON:0001895!1.28e-24!9;UBERON:0010092!1.28e-24!9;UBERON:0000025!8.65e-24!194;UBERON:0002420!2.38e-19!9;UBERON:0007245!2.38e-19!9;UBERON:0010009!2.38e-19!9;UBERON:0010011!2.38e-19!9;UBERON:0000454!2.38e-19!9;UBERON:0002308!1.15e-18!9;UBERON:0000125!1.15e-18!9;UBERON:0001871!2.94e-18!7;UBERON:0000200!5.18e-18!6;UBERON:0002037!8.75e-18!6;UBERON:0006215!8.75e-18!6;UBERON:0004111!8.93e-17!241;UBERON:0002298!1.23e-15!8;UBERON:0000064!1.58e-15!219;UBERON:0002021!2.40e-15!5;UBERON:0000349!6.10e-15!5;UBERON:0000483!3.46e-14!309;UBERON:0009663!3.56e-14!7;UBERON:0000119!6.30e-14!312;UBERON:0000477!6.86e-14!286;UBERON:0000475!5.89e-13!365;UBERON:0002771!2.64e-10!3;UBERON:0001872!4.93e-10!5;UBERON:0001896!6.30e-09!3;UBERON:0005290!6.30e-09!3;UBERON:0010096!6.30e-09!3;UBERON:0000062!1.41e-08!511;UBERON:0000988!1.44e-08!3;UBERON:0006331!1.94e-08!3;UBERON:0000922!4.61e-08!612;UBERON:0000923!8.80e-08!604;UBERON:0005291!8.80e-08!604;UBERON:0006598!8.80e-08!604;UBERON:0002532!8.80e-08!604;UBERON:0002050!9.61e-08!605;UBERON:0005423!9.61e-08!605;UBERON:0000369!2.01e-07!4;UBERON:0002435!2.01e-07!4;UBERON:0000204!2.01e-07!4;UBERON:0010082!2.01e-07!4;UBERON:0001954!4.84e-07!2;UBERON:0003022!4.84e-07!2;UBERON:0002421!4.84e-07!2;UBERON:0002600!4.84e-07!2;UBERON:0001870!4.99e-07!2;UBERON:0001876!5.45e-07!2 | ||
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|short_description=p8@LINC00461 | |short_description=p8@LINC00461 | ||
}} | }} |
Latest revision as of 03:20, 19 September 2015
Short description: | p8@LINC00461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LINC00461_5end |
Coexpression cluster: | C755_cerebellum_parietal_temporal_occipital_duodenum_brain_hippocampus |
Association with transcript: | -18bp_to_ENST00000513805_5end |
EntrezGene: | NA |
HGNC: | 42810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.01e-15 | 3 |
oligodendrocyte | 1.88e-11 | 7 |
macroglial cell | 1.88e-11 | 7 |
astrocyte | 1.88e-11 | 7 |
oligodendrocyte precursor cell | 1.88e-11 | 7 |
neural cell | 1.07e-10 | 25 |
neuronal stem cell | 1.90e-10 | 8 |