FFCP PHASE1:Hg19::chr5:87980660..87980676,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:87980660..87980676,- to FFCP PHASE1:Hg19::chr5:87980660..87980676,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42810 | |HGNC=42810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000513805_5end | |||
|cluster_id=chr5:87980660..87980676,- | |||
|coexpression_cluster_id=C755 | |||
|description=CAGE_peak_8_at_LINC00461_5end | |||
|id=chr5:87980660..87980676,- | |||
|ontology_enrichment_celltype=CL:0000128!2.55e-14!7;CL:0000126!2.55e-14!7;CL:0000127!2.55e-14!7;CL:0002453!2.55e-14!7;CL:0002319!1.17e-12!25;CL:0002605!1.92e-09!3;CL:0002603!4.38e-09!3;CL:0000095!3.75e-08!17;CL:0000123!3.75e-08!17;CL:0000243!3.45e-07!15;CL:0000125!3.45e-07!15;CL:0000030!3.45e-07!15;CL:0000339!3.45e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.63e-15;3!CL:0000047;1.42e-11;2!CL:0000128;1.46e-11;7!CL:0000126;1.46e-11;7!CL:0000127;1.46e-11;7!CL:0002319;9.41e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.01e-15,3;CL:0000128,1.88e-11,7;CL:0000126,1.88e-11,7;CL:0000127,1.88e-11,7;CL:0002453,1.88e-11,7;CL:0002319,1.07e-10,25;CL:0000047,1.90e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.07e-17;3!UBERON:0006601;5.98e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;3.85e-83;25!UBERON:0000203;3.85e-83;25!UBERON:0001869;3.92e-82;32!UBERON:0002791;2.04e-79;32!UBERON:0001893;4.06e-74;34!UBERON:0003528;6.44e-70;34!UBERON:0002020;6.44e-70;34!UBERON:0002619;1.61e-69;22!UBERON:0001950;2.56e-60;20!UBERON:0002780;6.16e-52;41!UBERON:0001890;6.16e-52;41!UBERON:0000073;1.67e-47;53!UBERON:0002616;1.67e-47;53!UBERON:0000955;3.25e-33;68!UBERON:0001017;7.58e-30;75!UBERON:0001016;6.85e-26;83!UBERON:0000200;1.17e-21;6!UBERON:0001871;8.08e-19;6!UBERON:0002021;2.19e-17;5!UBERON:0000349;1.25e-16;5!UBERON:0001870;5.03e-16;3!UBERON:0002037;1.38e-14;6!UBERON:0000369;2.98e-12;4!UBERON:0002435;2.98e-12;4!UBERON:0000204;2.98e-12;4!UBERON:0002771;9.05e-12;2!UBERON:0002702;1.95e-11;2!UBERON:0001954;3.04e-11;2!UBERON:0003022;3.04e-11;2!UBERON:0002421;3.04e-11;2!UBERON:0002600;3.04e-11;2!UBERON:0004733;7.35e-11;12!UBERON:0002028;7.35e-11;12!UBERON:0001872;4.31e-10;5!UBERON:0004732;5.28e-10;13!UBERON:0011216;6.90e-10;132!UBERON:0002680;9.37e-10;9!UBERON:0001895;9.37e-10;9!UBERON:0002420;1.94e-09;9!UBERON:0007245;1.94e-09;9!UBERON:0010009;1.94e-09;9!UBERON:0010011;1.94e-09;9!UBERON:0000454;1.94e-09;9!UBERON:0007023;3.56e-08;114!UBERON:0005383;5.40e-08;3!UBERON:0005382;5.40e-08;3!UBERON:0009663;3.41e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.54e-92,32;UBERON:0001893,6.11e-87,34;UBERON:0002791,3.43e-85,32;UBERON:0000956,2.07e-83,25;UBERON:0000203,2.07e-83,25;UBERON:0000073,3.19e-80,53;UBERON:0002616,3.19e-80,53;UBERON:0003528,5.05e-80,34;UBERON:0002020,5.05e-80,34;UBERON:0001049,1.12e-75,56;UBERON:0005068,1.12e-75,56;UBERON:0006241,1.12e-75,56;UBERON:0007135,1.12e-75,56;UBERON:0001017,3.97e-74,81;UBERON:0002780,1.52e-71,41;UBERON:0001890,1.52e-71,41;UBERON:0003080,1.52e-71,41;UBERON:0006240,1.52e-71,41;UBERON:0002619,7.46e-70,22;UBERON:0000955,2.03e-69,68;UBERON:0006238,2.03e-69,68;UBERON:0001016,3.16e-66,89;UBERON:0001950,1.14e-60,20;UBERON:0003075,4.95e-50,82;UBERON:0007284,4.95e-50,82;UBERON:0002346,1.91e-47,86;UBERON:0003056,1.06e-46,61;UBERON:0010371,3.06e-38,104;UBERON:0004121,7.84e-32,171;UBERON:0000924,7.84e-32,171;UBERON:0006601,7.84e-32,171;UBERON:0010314,3.73e-31,132;UBERON:0011216,3.33e-26,223;UBERON:0000200,8.51e-22,6;UBERON:0007023,8.92e-21,114;UBERON:0001871,8.11e-19,6;UBERON:0000025,6.27e-18,192;UBERON:0002021,2.20e-17,5;UBERON:0000349,1.25e-16,5;UBERON:0001870,2.70e-16,3;UBERON:0002037,1.82e-14,6;UBERON:0006215,1.82e-14,6;UBERON:0004111,4.26e-13,240;UBERON:0000369,3.76e-12,4;UBERON:0002435,3.76e-12,4;UBERON:0000204,3.76e-12,4;UBERON:0010082,3.76e-12,4;UBERON:0002771,7.93e-12,2;UBERON:0002702,1.58e-11,2;UBERON:0001954,3.29e-11,2;UBERON:0003022,3.29e-11,2;UBERON:0002421,3.29e-11,2;UBERON:0002600,3.29e-11,2;UBERON:0004733,9.45e-11,12;UBERON:0002028,9.45e-11,12;UBERON:0007277,9.45e-11,12;UBERON:0001872,4.00e-10,5;UBERON:0004732,6.65e-10,13;UBERON:0002680,1.12e-09,9;UBERON:0001895,1.12e-09,9;UBERON:0010092,1.12e-09,9;UBERON:0002420,2.06e-09,9;UBERON:0007245,2.06e-09,9;UBERON:0010009,2.06e-09,9;UBERON:0010011,2.06e-09,9;UBERON:0000454,2.06e-09,9;UBERON:0000483,6.33e-09,306;UBERON:0000119,8.88e-09,309;UBERON:0003076,1.51e-08,15;UBERON:0003057,1.51e-08,15;UBERON:0005383,6.21e-08,3;UBERON:0005382,6.21e-08,3;UBERON:0009663,3.88e-07,7 | |||
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| ||
|short_description=p8@LINC00461 | |||
}} | }} |
Latest revision as of 03:20, 19 September 2015
Short description: | p8@LINC00461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LINC00461_5end |
Coexpression cluster: | C755_cerebellum_parietal_temporal_occipital_duodenum_brain_hippocampus |
Association with transcript: | -18bp_to_ENST00000513805_5end |
EntrezGene: | NA |
HGNC: | 42810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.01e-15 | 3 |
oligodendrocyte | 1.88e-11 | 7 |
macroglial cell | 1.88e-11 | 7 |
astrocyte | 1.88e-11 | 7 |
oligodendrocyte precursor cell | 1.88e-11 | 7 |
neural cell | 1.07e-10 | 25 |
neuronal stem cell | 1.90e-10 | 8 |