FFCP PHASE1:Hg19::chr2:210574692..210574711,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:210574692..210574711,+ to FFCP PHASE1:Hg19::chr2:210574692..210574711,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4133 | |EntrezGene=4133 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6839 | |HGNC=6839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENST00000473543_5end | |||
|cluster_id=chr2:210574692..210574711,+ | |||
|coexpression_cluster_id=C2502 | |||
|description=CAGE_peak_19_at_MAP2_5end | |||
|id=chr2:210574692..210574711,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.11e-09;6!CL:0000404;6.11e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.30e-11,8;CL:0000540,7.20e-09,6;CL:0000031,7.20e-09,6;CL:0000404,7.20e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.96e-12;2!UBERON:0006601;1.99e-09;82!CL:0000031;6.11e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.24e-59!57;UBERON:0005068!2.24e-59!57;UBERON:0006241!2.24e-59!57;UBERON:0007135!2.24e-59!57;UBERON:0002780!2.07e-54!41;UBERON:0001890!2.07e-54!41;UBERON:0006240!2.07e-54!41;UBERON:0003080!8.45e-53!42;UBERON:0002616!8.08e-52!59;UBERON:0001017!1.58e-51!82;UBERON:0005743!2.89e-48!86;UBERON:0000955!1.93e-47!69;UBERON:0006238!1.93e-47!69;UBERON:0002020!6.15e-45!34;UBERON:0003528!6.15e-45!34;UBERON:0001893!2.09e-44!34;UBERON:0000073!1.93e-43!94;UBERON:0001016!1.93e-43!94;UBERON:0002791!5.16e-43!33;UBERON:0001869!1.50e-42!32;UBERON:0003075!2.34e-40!86;UBERON:0007284!2.34e-40!86;UBERON:0002346!9.02e-38!90;UBERON:0003056!1.37e-35!61;UBERON:0000956!1.21e-32!25;UBERON:0000203!1.21e-32!25;UBERON:0002619!5.20e-32!22;UBERON:0001950!7.28e-29!20;UBERON:0004121!4.14e-27!169;UBERON:0000924!5.35e-26!173;UBERON:0006601!5.35e-26!173;UBERON:0007023!1.48e-25!115;UBERON:0000033!6.18e-25!123;UBERON:0000153!5.58e-23!129;UBERON:0007811!5.58e-23!129;UBERON:0000025!8.92e-19!194;UBERON:0004111!1.74e-14!241;UBERON:0002420!8.98e-14!9;UBERON:0007245!8.98e-14!9;UBERON:0010009!8.98e-14!9;UBERON:0010011!8.98e-14!9;UBERON:0000454!8.98e-14!9;UBERON:0002308!1.44e-13!9;UBERON:0000125!1.44e-13!9;UBERON:0000483!1.65e-12!309;UBERON:0000477!2.78e-12!286;UBERON:0000119!3.52e-12!312;UBERON:0001894!3.33e-11!7;UBERON:0006222!3.33e-11!7;UBERON:0009663!7.83e-11!7;UBERON:0000475!8.43e-11!365;UBERON:0001871!1.74e-10!7;UBERON:0000200!2.50e-10!6;UBERON:0000064!4.35e-09!219;UBERON:0002021!6.38e-09!5;UBERON:0003076!6.95e-09!15;UBERON:0003057!6.95e-09!15;UBERON:0002298!7.23e-09!8;UBERON:0001872!7.60e-09!5;UBERON:0000349!9.34e-09!5;UBERON:0004733!1.61e-07!12;UBERON:0002028!1.61e-07!12;UBERON:0007277!1.61e-07!12;UBERON:0003296!2.83e-07!4;UBERON:0010133!2.83e-07!4;UBERON:0000062!3.29e-07!511;UBERON:0000369!3.47e-07!4;UBERON:0002435!3.47e-07!4;UBERON:0000204!3.47e-07!4;UBERON:0010082!3.47e-07!4;UBERON:0004732!8.32e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.52e-52;22!UBERON:0002791;7.19e-52;32!UBERON:0001869;7.53e-52;32!UBERON:0003528;1.85e-50;34!UBERON:0002020;1.85e-50;34!UBERON:0000956;6.40e-46;25!UBERON:0000203;6.40e-46;25!UBERON:0001893;6.87e-46;34!UBERON:0002780;1.25e-43;41!UBERON:0001890;1.25e-43;41!UBERON:0001950;6.57e-43;20!UBERON:0000073;4.56e-30;53!UBERON:0002616;4.56e-30;53!UBERON:0000955;1.92e-23;68!UBERON:0002420;3.14e-21;9!UBERON:0007245;3.14e-21;9!UBERON:0010009;3.14e-21;9!UBERON:0010011;3.14e-21;9!UBERON:0000454;3.14e-21;9!UBERON:0001017;3.68e-21;75!UBERON:0001871;4.79e-20;6!UBERON:0002021;2.29e-18;5!UBERON:0000349;4.57e-18;5!UBERON:0005383;3.53e-17;3!UBERON:0005382;3.53e-17;3!UBERON:0001016;1.35e-15;83!UBERON:0000125;5.33e-15;9!UBERON:0002308;5.33e-15;9!UBERON:0003296;1.37e-13;4!UBERON:0010133;1.37e-13;4!UBERON:0000369;5.05e-13;4!UBERON:0002435;5.05e-13;4!UBERON:0000204;5.05e-13;4!UBERON:0001905;5.55e-13;2!UBERON:0002757;5.55e-13;2!UBERON:0010134;5.55e-13;2!UBERON:0005408;5.55e-13;2!UBERON:0001899;5.55e-13;2!UBERON:0009663;9.73e-13;7!UBERON:0002771;1.15e-12;2!UBERON:0001954;1.33e-12;2!UBERON:0003022;1.33e-12;2!UBERON:0002421;1.33e-12;2!UBERON:0002600;1.33e-12;2!UBERON:0001873;5.96e-12;2!UBERON:0001876;1.07e-11;2!UBERON:0001872;5.00e-11;5!UBERON:0000200;3.42e-09;6!UBERON:0001894;5.83e-08;7!UBERON:0011216;1.19e-07;132!UBERON:0003112;3.89e-07;1!UBERON:0011158;3.89e-07;1!UBERON:0003128;3.89e-07;1!UBERON:0001703;3.89e-07;1!UBERON:0002241;3.89e-07;1!UBERON:0001874;6.20e-07;1!UBERON:0002784;6.77e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.01e-60,41;UBERON:0001890,2.01e-60,41;UBERON:0003080,2.01e-60,41;UBERON:0006240,2.01e-60,41;UBERON:0003528,4.90e-60,34;UBERON:0002020,4.90e-60,34;UBERON:0002791,1.33e-57,32;UBERON:0001869,1.33e-57,32;UBERON:0001017,3.39e-55,81;UBERON:0000073,4.25e-55,53;UBERON:0002616,4.25e-55,53;UBERON:0001893,4.47e-54,34;UBERON:0002619,1.96e-52,22;UBERON:0001049,6.22e-52,56;UBERON:0005068,6.22e-52,56;UBERON:0006241,6.22e-52,56;UBERON:0007135,6.22e-52,56;UBERON:0001016,3.15e-49,89;UBERON:0000955,4.64e-49,68;UBERON:0006238,4.64e-49,68;UBERON:0000956,5.12e-46,25;UBERON:0000203,5.12e-46,25;UBERON:0001950,4.66e-43,20;UBERON:0003056,2.08e-39,61;UBERON:0003075,4.51e-34,82;UBERON:0007284,4.51e-34,82;UBERON:0002346,2.85e-32,86;UBERON:0010371,7.30e-26,104;UBERON:0010314,2.97e-23,132;UBERON:0004121,2.99e-23,171;UBERON:0000924,2.99e-23,171;UBERON:0006601,2.99e-23,171;UBERON:0002420,1.69e-21,9;UBERON:0007245,1.69e-21,9;UBERON:0010009,1.69e-21,9;UBERON:0010011,1.69e-21,9;UBERON:0000454,1.69e-21,9;UBERON:0001871,3.09e-20,6;UBERON:0011216,1.97e-19,223;UBERON:0007023,5.01e-19,114;UBERON:0002021,2.56e-18,5;UBERON:0000349,3.35e-18,5;UBERON:0005383,2.67e-17,3;UBERON:0005382,2.67e-17,3;UBERON:0000125,3.72e-15,9;UBERON:0002308,3.72e-15,9;UBERON:0003296,1.56e-13,4;UBERON:0010133,1.56e-13,4;UBERON:0000369,4.11e-13,4;UBERON:0002435,4.11e-13,4;UBERON:0000204,4.11e-13,4;UBERON:0010082,4.11e-13,4;UBERON:0001905,5.56e-13,2;UBERON:0002757,5.56e-13,2;UBERON:0010134,5.56e-13,2;UBERON:0005408,5.56e-13,2;UBERON:0001899,5.56e-13,2;UBERON:0009663,7.83e-13,7;UBERON:0002771,1.12e-12,2;UBERON:0001954,1.58e-12,2;UBERON:0003022,1.58e-12,2;UBERON:0002421,1.58e-12,2;UBERON:0002600,1.58e-12,2;UBERON:0001873,5.19e-12,2;UBERON:0010122,5.19e-12,2;UBERON:0001876,6.14e-12,2;UBERON:0000025,9.64e-12,192;UBERON:0001872,5.35e-11,5;UBERON:0000200,3.06e-09,6;UBERON:0004111,2.11e-08,240;UBERON:0001894,6.26e-08,7;UBERON:0006222,6.26e-08,7;UBERON:0003112,3.78e-07,1;UBERON:0011158,3.78e-07,1;UBERON:0003128,3.78e-07,1;UBERON:0001703,3.78e-07,1;UBERON:0002241,3.78e-07,1;UBERON:0004761,3.78e-07,1;UBERON:0009617,3.78e-07,1;UBERON:0001874,5.37e-07,1;UBERON:0002784,6.77e-07,4 | |||
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| ||
|short_description=p19@MAP2 | |||
}} | }} |
Latest revision as of 21:24, 19 September 2015
Short description: | p19@MAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_MAP2_5end |
Coexpression cluster: | C2502_parietal_small_medial_occipital_temporal_pineal_Neurons |
Association with transcript: | 14bp_to_ENST00000473543_5end |
EntrezGene: | MAP2 |
HGNC: | 6839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.30e-11 | 8 |
neuron | 7.20e-09 | 6 |
neuroblast | 7.20e-09 | 6 |
electrically signaling cell | 7.20e-09 | 6 |