FFCP PHASE1:Hg19::chr12:79371636..79371672,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6857 | |EntrezGene=6857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11509 | |HGNC=11509 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZY3 | |UniProt=F8VZY3 | ||
|association_with_transcript=71bp_to_ENST00000551304_5end | |association_with_transcript=71bp_to_ENST00000551304_5end | ||
|cluster_id=chr12:79371636..79371672,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_13_at_SYT1_5end | |description=CAGE_peak_13_at_SYT1_5end | ||
|id=chr12:79371636..79371672,+ | |id=chr12:79371636..79371672,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.76e-09;1!CL:0000164;1.76e-09;1!CL:0000502;1.76e-09;1!CL:0000172;1.76e-09;1!CL:0000173;1.76e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.16e-09,1;CL:0000164,2.16e-09,1;CL:0000502,2.16e-09,1;CL:0000172,2.16e-09,1;CL:0000173,2.16e-09,1;CL:0002351,2.16e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.76e-09;1!UBERON:0006601;3.47e-08;82 | |||
|ontology_enrichment_disease=DOID:171!4.20e-09!10;DOID:169!1.93e-08!6 | |ontology_enrichment_disease=DOID:171!4.20e-09!10;DOID:169!1.93e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:4430;1.76e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.16e-09,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;3.44e-57;22!UBERON:0000956;2.42e-50;25!UBERON:0000203;2.42e-50;25!UBERON:0002791;8.57e-49;32!UBERON:0001869;8.66e-49;32!UBERON:0001950;5.96e-45;20!UBERON:0001893;7.38e-44;34!UBERON:0003528;7.02e-42;34!UBERON:0002020;7.02e-42;34!UBERON:0002780;1.54e-40;41!UBERON:0001890;1.54e-40;41!UBERON:0000073;1.39e-28;53!UBERON:0002616;1.39e-28;53!UBERON:0000349;1.48e-25;5!UBERON:0000955;3.20e-24;68!UBERON:0000200;2.30e-22;6!UBERON:0001017;1.79e-21;75!UBERON:0001871;1.29e-18;6!UBERON:0002784;3.63e-18;4!UBERON:0002702;1.21e-17;2!UBERON:0002771;1.43e-17;2!UBERON:0001954;4.49e-17;2!UBERON:0003022;4.49e-17;2!UBERON:0002421;4.49e-17;2!UBERON:0002600;4.49e-17;2!UBERON:0001905;1.33e-16;2!UBERON:0002757;1.33e-16;2!UBERON:0010134;1.33e-16;2!UBERON:0005408;1.33e-16;2!UBERON:0001899;1.33e-16;2!UBERON:0002021;3.32e-15;5!UBERON:0001870;4.47e-12;3!UBERON:0001016;6.94e-12;83!UBERON:0001894;1.25e-10;7!UBERON:0003112;1.76e-09;1!UBERON:0011158;1.76e-09;1!UBERON:0003128;1.76e-09;1!UBERON:0001703;1.76e-09;1!UBERON:0002241;1.76e-09;1!UBERON:0001882;3.67e-09;1!UBERON:0001874;3.67e-09;1!UBERON:0005403;3.67e-09;1!UBERON:0000369;9.24e-09;4!UBERON:0002435;9.24e-09;4!UBERON:0003296;9.24e-09;4!UBERON:0010133;9.24e-09;4!UBERON:0000204;9.24e-09;4!UBERON:0011216;1.26e-08;132!UBERON:0002420;2.23e-08;9!UBERON:0007245;2.23e-08;9!UBERON:0010009;2.23e-08;9!UBERON:0010011;2.23e-08;9!UBERON:0000454;2.23e-08;9!UBERON:0007023;4.26e-08;114!UBERON:0001872;1.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.62e-58,41;UBERON:0001890,1.62e-58,41;UBERON:0003080,1.62e-58,41;UBERON:0006240,1.62e-58,41;UBERON:0002619,2.39e-57,22;UBERON:0002791,3.09e-52,32;UBERON:0001869,3.09e-52,32;UBERON:0000956,1.76e-50,25;UBERON:0000203,1.76e-50,25;UBERON:0000073,4.25e-50,53;UBERON:0002616,4.25e-50,53;UBERON:0003528,4.18e-49,34;UBERON:0002020,4.18e-49,34;UBERON:0001893,4.18e-49,34;UBERON:0001049,2.70e-47,56;UBERON:0005068,2.70e-47,56;UBERON:0006241,2.70e-47,56;UBERON:0007135,2.70e-47,56;UBERON:0000955,6.98e-47,68;UBERON:0006238,6.98e-47,68;UBERON:0001950,5.15e-45,20;UBERON:0001017,5.45e-43,81;UBERON:0003056,1.17e-38,61;UBERON:0001016,1.91e-38,89;UBERON:0003075,1.79e-31,82;UBERON:0007284,1.79e-31,82;UBERON:0002346,7.05e-30,86;UBERON:0007023,2.00e-27,114;UBERON:0000349,1.43e-25,5;UBERON:0010371,3.40e-24,104;UBERON:0000200,2.57e-22,6;UBERON:0010314,1.16e-20,132;UBERON:0001871,1.21e-18,6;UBERON:0004121,1.22e-18,171;UBERON:0000924,1.22e-18,171;UBERON:0006601,1.22e-18,171;UBERON:0002784,4.75e-18,4;UBERON:0002702,1.37e-17,2;UBERON:0002771,1.49e-17,2;UBERON:0001954,3.12e-17,2;UBERON:0003022,3.12e-17,2;UBERON:0002421,3.12e-17,2;UBERON:0002600,3.12e-17,2;UBERON:0001905,2.73e-16,2;UBERON:0002757,2.73e-16,2;UBERON:0010134,2.73e-16,2;UBERON:0005408,2.73e-16,2;UBERON:0001899,2.73e-16,2;UBERON:0002021,2.87e-15,5;UBERON:0011216,5.65e-15,223;UBERON:0001870,4.86e-12,3;UBERON:0000025,1.25e-11,192;UBERON:0001894,1.46e-10,7;UBERON:0006222,1.46e-10,7;UBERON:0003112,1.56e-09,1;UBERON:0011158,1.56e-09,1;UBERON:0003128,1.56e-09,1;UBERON:0001703,1.56e-09,1;UBERON:0002241,1.56e-09,1;UBERON:0004761,1.56e-09,1;UBERON:0009617,1.56e-09,1;UBERON:0001874,4.15e-09,1;UBERON:0001882,5.28e-09,1;UBERON:0005403,5.28e-09,1;UBERON:0000369,1.17e-08,4;UBERON:0002435,1.17e-08,4;UBERON:0000204,1.17e-08,4;UBERON:0010082,1.17e-08,4;UBERON:0004111,1.25e-08,240;UBERON:0003296,1.32e-08,4;UBERON:0010133,1.32e-08,4;UBERON:0002420,2.56e-08,9;UBERON:0007245,2.56e-08,9;UBERON:0010009,2.56e-08,9;UBERON:0010011,2.56e-08,9;UBERON:0000454,2.56e-08,9;UBERON:0001872,1.36e-07,5 | |||
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|short_description=p13@SYT1 | |short_description=p13@SYT1 | ||
}} | }} |
Latest revision as of 23:23, 24 September 2015
Short description: | p13@SYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SYT1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 71bp_to_ENST00000551304_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | F8VZY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.16e-09 | 1 |
enteroendocrine cell | 2.16e-09 | 1 |
type D enteroendocrine cell | 2.16e-09 | 1 |
somatostatin secreting cell | 2.16e-09 | 1 |
pancreatic D cell | 2.16e-09 | 1 |
progenitor cell of endocrine pancreas | 2.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.16e-09 | 1 |