FFCP PHASE1:Hg19::chr11:89867803..89867877,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10003 | |EntrezGene=10003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14526 | |HGNC=14526 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y3Q0,Q4G181,Q4KKV4 | |UniProt=Q9Y3Q0,Q4G181,Q4KKV4 | ||
|association_with_transcript=0bp_to_ENST00000524501,ENST00000529090,NM_005467,uc001pdd.2,uc001pde.2,uc001pdf.3,uc009yvx.2,uc009yvy.2_5end | |association_with_transcript=0bp_to_ENST00000524501,ENST00000529090,NM_005467,uc001pdd.2,uc001pde.2,uc001pdf.3,uc009yvx.2,uc009yvy.2_5end | ||
|cluster_id=chr11:89867803..89867877,+ | |||
|description=CAGE_peak_1_at_NAALAD2_5end | |description=CAGE_peak_1_at_NAALAD2_5end | ||
|id=chr11:89867803..89867877,+ | |id=chr11:89867803..89867877,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.10e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.96e-35!94;UBERON:0001016!2.96e-35!94;UBERON:0007023!1.17e-33!115;UBERON:0005743!3.11e-33!86;UBERON:0002346!9.43e-32!90;UBERON:0001017!3.11e-31!82;UBERON:0001049!3.65e-31!57;UBERON:0005068!3.65e-31!57;UBERON:0006241!3.65e-31!57;UBERON:0007135!3.65e-31!57;UBERON:0003075!6.35e-31!86;UBERON:0007284!6.35e-31!86;UBERON:0002616!8.82e-31!59;UBERON:0000955!1.35e-27!69;UBERON:0006238!1.35e-27!69;UBERON:0003080!4.85e-24!42;UBERON:0002780!6.46e-24!41;UBERON:0001890!6.46e-24!41;UBERON:0006240!6.46e-24!41;UBERON:0000924!1.44e-23!173;UBERON:0006601!1.44e-23!173;UBERON:0003056!1.75e-23!61;UBERON:0004121!1.19e-22!169;UBERON:0002020!4.16e-20!34;UBERON:0003528!4.16e-20!34;UBERON:0001893!8.36e-20!34;UBERON:0002791!3.29e-19!33;UBERON:0001869!9.24e-19!32;UBERON:0000033!1.70e-18!123;UBERON:0000153!2.44e-18!129;UBERON:0007811!2.44e-18!129;UBERON:0000956!1.91e-14!25;UBERON:0000203!1.91e-14!25;UBERON:0000481!2.26e-14!347;UBERON:0000119!4.16e-14!312;UBERON:0002619!5.39e-14!22;UBERON:0000483!1.49e-13!309;UBERON:0001950!4.54e-13!20;UBERON:0000475!9.20e-11!365;UBERON:0000922!1.70e-10!612;UBERON:0000468!6.72e-10!659;UBERON:0000025!1.20e-09!194;UBERON:0000477!2.84e-09!286;UBERON:0002050!2.35e-08!605;UBERON:0005423!2.35e-08!605;UBERON:0003076!3.06e-08!15;UBERON:0003057!3.06e-08!15;UBERON:0004111!4.10e-08!241;UBERON:0000923!4.95e-08!604;UBERON:0005291!4.95e-08!604;UBERON:0006598!4.95e-08!604;UBERON:0002532!4.95e-08!604;UBERON:0000064!8.63e-08!219;UBERON:0002308!3.55e-07!9;UBERON:0000125!3.55e-07!9;UBERON:0000062!4.92e-07!511;UBERON:0004732!4.99e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.03e-21;41!UBERON:0001890;4.03e-21;41!UBERON:0003528;4.16e-21;34!UBERON:0002020;4.16e-21;34!UBERON:0001869;7.65e-21;32!UBERON:0001893;7.96e-21;34!UBERON:0002791;9.34e-21;32!UBERON:0000073;4.89e-20;53!UBERON:0002616;4.89e-20;53!UBERON:0000956;1.58e-17;25!UBERON:0000203;1.58e-17;25!UBERON:0002619;4.20e-17;22!UBERON:0001950;5.94e-16;20!UBERON:0001017;5.77e-15;75!UBERON:0000955;3.74e-14;68!UBERON:0001016;6.64e-13;83!UBERON:0007023;4.48e-10;114!UBERON:0000922;1.12e-08;49!UBERON:0000125;1.40e-08;9!UBERON:0002308;1.40e-08;9!UBERON:0004732;2.75e-08;13!UBERON:0002420;6.58e-08;9!UBERON:0007245;6.58e-08;9!UBERON:0010009;6.58e-08;9!UBERON:0010011;6.58e-08;9!UBERON:0000454;6.58e-08;9!UBERON:0011216;8.30e-08;132!UBERON:0004733;1.22e-07;12!UBERON:0002028;1.22e-07;12!UBERON:0010314;5.42e-07;132!UBERON:0009663;7.33e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.64e-40,86;UBERON:0003075,6.34e-39,82;UBERON:0007284,6.34e-39,82;UBERON:0001049,2.02e-38,56;UBERON:0005068,2.02e-38,56;UBERON:0006241,2.02e-38,56;UBERON:0007135,2.02e-38,56;UBERON:0001016,9.53e-38,89;UBERON:0001017,2.02e-36,81;UBERON:0007023,3.12e-36,114;UBERON:0000073,4.55e-36,53;UBERON:0002616,4.55e-36,53;UBERON:0010314,1.73e-34,132;UBERON:0000955,3.19e-33,68;UBERON:0006238,3.19e-33,68;UBERON:0010371,1.24e-32,104;UBERON:0003056,5.81e-30,61;UBERON:0002780,1.61e-29,41;UBERON:0001890,1.61e-29,41;UBERON:0003080,1.61e-29,41;UBERON:0006240,1.61e-29,41;UBERON:0004121,3.97e-29,171;UBERON:0000924,3.97e-29,171;UBERON:0006601,3.97e-29,171;UBERON:0003528,9.47e-25,34;UBERON:0002020,9.47e-25,34;UBERON:0001893,2.27e-24,34;UBERON:0011216,2.70e-24,223;UBERON:0001869,4.59e-23,32;UBERON:0002791,5.27e-23,32;UBERON:0000956,1.16e-17,25;UBERON:0000203,1.16e-17,25;UBERON:0002619,4.23e-17,22;UBERON:0000119,1.44e-16,309;UBERON:0001950,6.06e-16,20;UBERON:0000483,6.91e-16,306;UBERON:0000922,2.31e-14,592;UBERON:0002050,1.42e-12,564;UBERON:0000923,1.57e-12,560;UBERON:0010316,1.57e-12,560;UBERON:0005291,1.57e-12,560;UBERON:0006598,1.57e-12,560;UBERON:0010317,1.57e-12,560;UBERON:0002532,1.57e-12,560;UBERON:0005423,4.59e-12,581;UBERON:0000025,1.03e-10,192;UBERON:0003076,6.54e-10,15;UBERON:0003057,6.54e-10,15;UBERON:0000125,1.39e-08,9;UBERON:0002308,1.39e-08,9;UBERON:0004732,2.12e-08,13;UBERON:0002420,6.28e-08,9;UBERON:0007245,6.28e-08,9;UBERON:0010009,6.28e-08,9;UBERON:0010011,6.28e-08,9;UBERON:0000454,6.28e-08,9;UBERON:0004733,9.45e-08,12;UBERON:0002028,9.45e-08,12;UBERON:0007277,9.45e-08,12;UBERON:0004111,1.20e-07,240;UBERON:0009663,7.35e-07,7 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,1.82829939739887,0.491467873003018,0,1.96597234917155,0.263766978228454,2.59909341216098,1.65698687863958,0,0,0,0,3.32426856807327,2.44800829493104,2.5076377718247,4.00730381983479,1.91624195102038,1.88313959392204,0.764134057479513,0.328402357799783,0.629686250509434,0,0.767658796194425,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0,2.42159801053347,0,0,0.211255286311942,0,0,0,0,0,1.14005097496499,1.59133341759272,3.47061892152804,0,0,0,0,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,4.02420515822182,2.42938867502708,0,0,0.434539556882471,0,0,12.8567351343132,5.5432349365641,5.44575671297381,14.2112296915018,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.775250277507987,0.71153252537342,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0,3.48268940307911,3.59246996201872,1.23872628531654,0,0,0.916008719652036,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0.560677600142307,0,0,8.71390899119346,0.538842688278752,1.63461903113459,3.02714855289863,4.03323147135999,0,1.24864030732128,0,0,3.17073146338165,2.26622122115384,2.80901613404497,0,2.94802361548243,0.413303124703062,0,0,0.910161361938026,0,3.19838616512726,2.87772595705518,0,0,0,0.150238058906597,0,0.358779271377724,0.640672166455702,0.635795703478686,0,0,0,0.18611685633159,0.168776332241266,0,0.504867548488229,0.276149695926898,0.646584227275248,0,0.201504196455281,0.169560592310488,0,0,0,6.83052754325734,13.2529768321485,15.2214065159069,12.2320044918137,14.1299676490352,18.6138453128673,6.25798129319264,8.36213219650751,1.38134921352481,5.10804720835177,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,1.77236972004421,0,144.265438411072,2.91665277507493,0,0,0,0,0.325808305310325,0,1.44331342025273,9.04257158805599,6.22266079449855,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.308482478109971,0,1.71495859578347,1.79409734952577,3.05172048183296,1.54010400223995,2.71470603091333,3.57656445851882,0,0,0,2.05765899409714,0,1.0656887160644,2.28764789853036,4.88359444852299,1.64648067356154,0.977208552881205,2.84313558994037,0,2.71295439353627,0,3.29910870900788,0,0,0,0,0,2.85273810081437,0.289562613335158,1.2328579353023,0.179060963239896,0,0.197030760201927,0,0,1.52456774533478,0,1.54657762555539,0.670065061337395,0.637938751653163,0,0,0,4.2942022101699,5.50187573165645,0.813795071099207,0,0,0,0.117141414992713,0.902838299183157,0,0,1.32845119707087,0.553107505625109,0.347534457872331,2.74121620447837,3.0882908142977,0,0.431428401637234,0.106727557803444,0.303127571446259,0,2.11673205330776,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.410635780069046,0.519254429183621,0.116210378459959,125.210389776921,0,0,0.114814448164607,0,0.131124414959424,0,0.308061348417659,0,0,0.316654886678627,1.13733384070897,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0,0,0.447749509444357,0.219259876645935,0,5.89835287767695,5.24823433119529,8.78521665593618,4.84292754744295,8.51596022810594,15.5117859850705,0,0,0,0.096670718292122,3.08097234229289,3.53058451870098,2.20538515975249,7.84167787538397,5.51063436874068,2.64202544989913,0.890320356467374,0,0,0,0,0,0.31481234683064,0,0,1.59691809095107,0,0,0,4.46590043231601,10.1241415909992,1.33441135746677,1.02359116524534,4.70732886837312,0,0,3.95719406683292,5.76527762445715,2.94531005864216,0.202182481573316,0,0,0.48763373908959,0,0,0.682499557039929,0,1.13008116620243,0,0,0,0,5.24715801637306,0.202910376962704,0.30982349809975,0.845086807596724,2.86822704408103,2.35797698431491,0,4.61189383291777,0.211107635297664,0,1.13841952129715,1.04980416073495,0,0,0,4.9896214411693,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0,4.39524537815682,0,0,0,0.23874448473769,1.18785872333055,0,6.95903353436409,8.58083440104128,0,0,0.422250816255987,1.39473591775749,6.07824614168525,0,0.102268682502155,0.369254416383208,0,0,0,0,2.95930216910801,0,2.22273980289274,6.78532922266653,7.79252024559551,3.99227596002388,0,0,2.17499872630438,0,0,0,1.03423011972439,11.3725799219469,0.173624994933292,22.143534645346,10.0095044059089,4.5774520895125,2.98564001814306,1.77328571372128,5.26524953169534,0,0,19.0067138504379,1.59518878185802,0.69169171316418,1.34636466614658,63.7760073182187,0.31900115973192,0.915975934018623,1.5991043280559,0,0,0.332423363800313,0.225595660617181,0,0,0,0,0.843992258112108,0,162.556032149032,0.216388639742091,0.995261931078505,1.85760885457012,6.11030144933625,0.593042257361244,1.11207545051853,1.2530633940654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| |phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,1.82829939739887,0.491467873003018,0,1.96597234917155,0.263766978228454,2.59909341216098,1.65698687863958,0,0,0,0,3.32426856807327,2.44800829493104,2.5076377718247,4.00730381983479,1.91624195102038,1.88313959392204,0.764134057479513,0.328402357799783,0.629686250509434,0,0.767658796194425,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0.502497330513487,0,0,2.42159801053347,0,0,0.211255286311942,0,0,0,0,0,1.14005097496499,1.59133341759272,3.47061892152804,0,0,0,0,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,4.02420515822182,2.42938867502708,0,0,0.434539556882471,0,0,12.8567351343132,5.5432349365641,5.44575671297381,14.2112296915018,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.775250277507987,0.71153252537342,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0,3.48268940307911,3.59246996201872,1.23872628531654,0,0,0.916008719652036,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0.560677600142307,0,0,8.71390899119346,0.538842688278752,1.63461903113459,3.02714855289863,4.03323147135999,0,1.24864030732128,0,0,3.17073146338165,2.26622122115384,2.80901613404497,0,2.94802361548243,0.413303124703062,0,0,0.910161361938026,0,3.19838616512726,2.87772595705518,0,0,0,0.150238058906597,0,0.358779271377724,0.640672166455702,0.635795703478686,0,0,0,0.18611685633159,0.168776332241266,0,0.504867548488229,0.276149695926898,0.646584227275248,0,0.201504196455281,0.169560592310488,0,0,0,6.83052754325734,13.2529768321485,15.2214065159069,12.2320044918137,14.1299676490352,18.6138453128673,6.25798129319264,8.36213219650751,1.38134921352481,5.10804720835177,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,1.77236972004421,0,144.265438411072,2.91665277507493,0,0,0,0,0.325808305310325,0,1.44331342025273,9.04257158805599,6.22266079449855,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.308482478109971,0,1.71495859578347,1.79409734952577,3.05172048183296,1.54010400223995,2.71470603091333,3.57656445851882,0,0,0,2.05765899409714,0,1.0656887160644,2.28764789853036,4.88359444852299,1.64648067356154,0.977208552881205,2.84313558994037,0,2.71295439353627,0,3.29910870900788,0,0,0,0,0,2.85273810081437,0.289562613335158,1.2328579353023,0.179060963239896,0,0.197030760201927,0,0,1.52456774533478,0,1.54657762555539,0.670065061337395,0.637938751653163,0,0,0,4.2942022101699,5.50187573165645,0.813795071099207,0,0,0,0.117141414992713,0.902838299183157,0,0,1.32845119707087,0.553107505625109,0.347534457872331,2.74121620447837,3.0882908142977,0,0.431428401637234,0.106727557803444,0.303127571446259,0,2.11673205330776,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.410635780069046,0.519254429183621,0.116210378459959,125.210389776921,0,0,0.114814448164607,0,0.131124414959424,0,0.308061348417659,0,0,0.316654886678627,1.13733384070897,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0,0,0.447749509444357,0.219259876645935,0,5.89835287767695,5.24823433119529,8.78521665593618,4.84292754744295,8.51596022810594,15.5117859850705,0,0,0,0.096670718292122,3.08097234229289,3.53058451870098,2.20538515975249,7.84167787538397,5.51063436874068,2.64202544989913,0.890320356467374,0,0,0,0,0,0.31481234683064,0,0,1.59691809095107,0,0,0,4.46590043231601,10.1241415909992,1.33441135746677,1.02359116524534,4.70732886837312,0,0,3.95719406683292,5.76527762445715,2.94531005864216,0.202182481573316,0,0,0.48763373908959,0,0,0.682499557039929,0,1.13008116620243,0,0,0,0,5.24715801637306,0.202910376962704,0.30982349809975,0.845086807596724,2.86822704408103,2.35797698431491,0,4.61189383291777,0.211107635297664,0,1.13841952129715,1.04980416073495,0,0,0,4.9896214411693,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0,4.39524537815682,0,0,0,0.23874448473769,1.18785872333055,0,6.95903353436409,8.58083440104128,0,0,0.422250816255987,1.39473591775749,6.07824614168525,0,0.102268682502155,0.369254416383208,0,0,0,0,2.95930216910801,0,2.22273980289274,6.78532922266653,7.79252024559551,3.99227596002388,0,0,2.17499872630438,0,0,0,1.03423011972439,11.3725799219469,0.173624994933292,22.143534645346,10.0095044059089,4.5774520895125,2.98564001814306,1.77328571372128,5.26524953169534,0,0,19.0067138504379,1.59518878185802,0.69169171316418,1.34636466614658,63.7760073182187,0.31900115973192,0.915975934018623,1.5991043280559,0,0,0.332423363800313,0.225595660617181,0,0,0,0,0.843992258112108,0,162.556032149032,0.216388639742091,0.995261931078505,1.85760885457012,6.11030144933625,0.593042257361244,1.11207545051853,1.2530633940654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| ||
|short_description=p1@NAALAD2 | |short_description=p1@NAALAD2 | ||
}} | }} |
Latest revision as of 00:35, 25 September 2015
Short description: | p1@NAALAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAALAD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524501, ENST00000529090, NM_005467, uc001pdd.2, uc001pde.2, uc001pdf.3, uc009yvx.2, uc009yvy.2_5end |
EntrezGene: | NAALAD2 |
HGNC: | 14526 |
UniProt: | Q9Y3Q0Q4G181Q4KKV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data