FFCP PHASE1:Hg19::chr20:45212286..45212325,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64849 | |EntrezGene=64849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14430 | |HGNC=14430 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010zxv.1_5end | |association_with_transcript=0bp_to_uc010zxv.1_5end | ||
|cluster_id=chr20:45212286..45212325,- | |||
|description=CAGE_peak_4_at_SLC13A3_5end | |description=CAGE_peak_4_at_SLC13A3_5end | ||
|id=chr20:45212286..45212325,- | |id=chr20:45212286..45212325,- | ||
|ontology_enrichment_celltype=CL:0002322!9.43e-15!5;CL:0000047!3.01e-08!8;CL:0000540!1.32e-07!6;CL:0000031!1.32e-07!6;CL:0000404!1.32e-07!6 | |ontology_enrichment_celltype=CL:0002322!9.43e-15!5;CL:0000047!3.01e-08!8;CL:0000540!1.32e-07!6;CL:0000031!1.32e-07!6;CL:0000404!1.32e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.62e-35;5!CL:0002321;1.12e-11;15!CL:0000540;3.03e-11;6!CL:0000404;3.03e-11;6!CL:0000039;1.09e-09;7!CL:0000586;1.09e-09;7!CL:0000148;6.31e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.36e-35,5;CL:0000540,3.14e-11,6;CL:0000031,3.14e-11,6;CL:0000404,3.14e-11,6;CL:0000039,1.21e-09,7;CL:0000586,1.21e-09,7;CL:0000047,1.54e-08,8;CL:0000148,6.19e-07,10;CL:0000541,6.19e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.42e-11;10!UBERON:0005564;1.42e-11;10!CL:0000031;3.03e-11;6!UBERON:0003056;2.91e-10;3!UBERON:0006222;4.89e-08;1!UBERON:0005425;4.89e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;6.92e-08;22!DOID:2994;6.92e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.13e-08,22;DOID:2994,7.13e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-59!82;UBERON:0005743!3.04e-59!86;UBERON:0001049!4.36e-58!57;UBERON:0005068!4.36e-58!57;UBERON:0006241!4.36e-58!57;UBERON:0007135!4.36e-58!57;UBERON:0000073!1.51e-57!94;UBERON:0001016!1.51e-57!94;UBERON:0002616!2.07e-49!59;UBERON:0000955!3.57e-48!69;UBERON:0006238!3.57e-48!69;UBERON:0002780!7.90e-48!41;UBERON:0001890!7.90e-48!41;UBERON:0006240!7.90e-48!41;UBERON:0003080!1.64e-46!42;UBERON:0001893!3.75e-43!34;UBERON:0002020!7.91e-43!34;UBERON:0003528!7.91e-43!34;UBERON:0003075!1.60e-41!86;UBERON:0007284!1.60e-41!86;UBERON:0002791!4.91e-41!33;UBERON:0002346!3.52e-39!90;UBERON:0001869!1.51e-38!32;UBERON:0003056!2.82e-34!61;UBERON:0007023!3.05e-34!115;UBERON:0002619!8.10e-28!22;UBERON:0004121!9.00e-28!169;UBERON:0001950!4.56e-27!20;UBERON:0000033!5.39e-27!123;UBERON:0000924!7.86e-27!173;UBERON:0006601!7.86e-27!173;UBERON:0000153!3.17e-25!129;UBERON:0007811!3.17e-25!129;UBERON:0000956!4.45e-24!25;UBERON:0000203!4.45e-24!25;UBERON:0002420!2.26e-22!9;UBERON:0007245!2.26e-22!9;UBERON:0010009!2.26e-22!9;UBERON:0010011!2.26e-22!9;UBERON:0000454!2.26e-22!9;UBERON:0002308!3.00e-22!9;UBERON:0000125!3.00e-22!9;UBERON:0009663!5.76e-18!7;UBERON:0002298!2.76e-15!8;UBERON:0001871!1.62e-14!7;UBERON:0003076!1.84e-12!15;UBERON:0003057!1.84e-12!15;UBERON:0004732!1.51e-11!13;UBERON:0000025!1.18e-10!194;UBERON:0000369!1.21e-10!4;UBERON:0002435!1.21e-10!4;UBERON:0000204!1.21e-10!4;UBERON:0010082!1.21e-10!4;UBERON:0000200!2.24e-10!6;UBERON:0004733!1.40e-09!12;UBERON:0002028!1.40e-09!12;UBERON:0007277!1.40e-09!12;UBERON:0000349!1.14e-08!5;UBERON:0001872!1.19e-08!5;UBERON:0001896!1.45e-08!3;UBERON:0005290!1.45e-08!3;UBERON:0010096!1.45e-08!3;UBERON:0006331!1.93e-08!3;UBERON:0000988!2.69e-08!3;UBERON:0005383!2.76e-08!3;UBERON:0005382!2.76e-08!3;UBERON:0002771!4.81e-08!3;UBERON:0004111!8.82e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;1.16e-18;9!UBERON:0007245;1.16e-18;9!UBERON:0010009;1.16e-18;9!UBERON:0010011;1.16e-18;9!UBERON:0000454;1.16e-18;9!UBERON:0009663;9.70e-16;7!UBERON:0005162;1.28e-14;2!UBERON:0000122;1.28e-14;2!UBERON:0001897;2.22e-14;2!UBERON:0001875;2.22e-14;2!UBERON:0006514;2.22e-14;2!UBERON:0010225;2.22e-14;2!UBERON:0002780;3.33e-14;41!UBERON:0001890;3.33e-14;41!UBERON:0000125;2.75e-12;9!UBERON:0002308;2.75e-12;9!UBERON:0001893;2.59e-09;34!UBERON:0001894;3.49e-09;7!UBERON:0000073;4.80e-09;53!UBERON:0002616;4.80e-09;53!UBERON:0002791;1.05e-08;32!UBERON:0000473;1.56e-08;8!UBERON:0002336;2.79e-08;1!UBERON:0011215;2.79e-08;1!UBERON:0001018;2.79e-08;1!UBERON:0002473;2.79e-08;1!UBERON:0005340;2.79e-08;1!UBERON:0003544;2.79e-08;1!UBERON:0005970;2.79e-08;1!UBERON:0002316;2.79e-08;1!UBERON:0001020;2.79e-08;1!UBERON:0002437;2.79e-08;1!UBERON:0002038;4.89e-08;1!UBERON:0000941;4.89e-08;1!UBERON:0001785;4.89e-08;1!UBERON:0002464;4.89e-08;1!UBERON:0004904;4.89e-08;1!UBERON:0001021;4.89e-08;1!UBERON:0009661;4.89e-08;1!UBERON:0002950;4.89e-08;1!UBERON:0001891;4.89e-08;1!UBERON:0002784;1.24e-07;4!UBERON:0003528;2.53e-07;34!UBERON:0002020;2.53e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.00e-18,9;UBERON:0007245,1.00e-18,9;UBERON:0010009,1.00e-18,9;UBERON:0010011,1.00e-18,9;UBERON:0000454,1.00e-18,9;UBERON:0001016,5.19e-18,89;UBERON:0001017,7.91e-18,81;UBERON:0002780,2.08e-17,41;UBERON:0001890,2.08e-17,41;UBERON:0003080,2.08e-17,41;UBERON:0006240,2.08e-17,41;UBERON:0003056,5.89e-16,61;UBERON:0009663,1.03e-15,7;UBERON:0001049,8.93e-15,56;UBERON:0005068,8.93e-15,56;UBERON:0006241,8.93e-15,56;UBERON:0007135,8.93e-15,56;UBERON:0005162,1.11e-14,2;UBERON:0000122,1.11e-14,2;UBERON:0001897,1.57e-14,2;UBERON:0010225,1.57e-14,2;UBERON:0001875,2.55e-14,2;UBERON:0006514,2.55e-14,2;UBERON:0003075,2.90e-13,82;UBERON:0007284,2.90e-13,82;UBERON:0000073,4.06e-13,53;UBERON:0002616,4.06e-13,53;UBERON:0002346,1.56e-12,86;UBERON:0000125,2.88e-12,9;UBERON:0002308,2.88e-12,9;UBERON:0000955,1.15e-11,68;UBERON:0006238,1.15e-11,68;UBERON:0001893,3.20e-11,34;UBERON:0007023,1.87e-10,114;UBERON:0010371,6.17e-10,104;UBERON:0001894,3.25e-09,7;UBERON:0006222,3.25e-09,7;UBERON:0002791,3.45e-09,32;UBERON:0004121,3.50e-09,171;UBERON:0000924,3.50e-09,171;UBERON:0006601,3.50e-09,171;UBERON:0003528,1.28e-08,34;UBERON:0002020,1.28e-08,34;UBERON:0000473,1.70e-08,8;UBERON:0002336,3.10e-08,1;UBERON:0011215,3.10e-08,1;UBERON:0001018,3.10e-08,1;UBERON:0002473,3.10e-08,1;UBERON:0005340,3.10e-08,1;UBERON:0003544,3.10e-08,1;UBERON:0005970,3.10e-08,1;UBERON:0002316,3.10e-08,1;UBERON:0001020,3.10e-08,1;UBERON:0002437,3.10e-08,1;UBERON:0000941,3.83e-08,1;UBERON:0001785,3.83e-08,1;UBERON:0002464,3.83e-08,1;UBERON:0004904,3.83e-08,1;UBERON:0001021,3.83e-08,1;UBERON:0003902,3.83e-08,1;UBERON:0005425,3.83e-08,1;UBERON:0002038,4.41e-08,1;UBERON:0009661,4.41e-08,1;UBERON:0002950,4.41e-08,1;UBERON:0001891,4.41e-08,1;UBERON:0009616,4.41e-08,1;UBERON:0010286,4.41e-08,1;UBERON:0002784,1.05e-07,4;UBERON:0010314,2.66e-07,132;UBERON:0001869,7.51e-07,32 | |||
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|short_description=p4@SLC13A3 | |short_description=p4@SLC13A3 | ||
}} | }} |
Latest revision as of 15:06, 16 September 2015
Short description: | p4@SLC13A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC13A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010zxv.1_5end |
EntrezGene: | SLC13A3 |
HGNC: | 14430 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.36e-35 | 5 |
neuron | 3.14e-11 | 6 |
neuroblast | 3.14e-11 | 6 |
electrically signaling cell | 3.14e-11 | 6 |
germ line cell | 1.21e-09 | 7 |
germ cell | 1.21e-09 | 7 |
neuronal stem cell | 1.54e-08 | 8 |
melanocyte | 6.19e-07 | 10 |
melanoblast | 6.19e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.13e-08 | 22 |
germ cell cancer | 7.13e-08 | 22 |