FFCP PHASE1:Hg19::chr5:154230130..154230210,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10826 | |EntrezGene=10826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1334 | |HGNC=1334 | ||
|TSSclassifier=strong | |||
|UniProt=B4DIE1,E5RH66,E5RH84,E5RK01,E5RJQ9,E5RK16 | |UniProt=B4DIE1,E5RH66,E5RH84,E5RK01,E5RJQ9,E5RK16 | ||
|association_with_transcript=0bp_to_ENST00000423554,ENST00000517448,ENST00000517938,ENST00000518651,ENST00000519501,ENST00000520461,ENST00000520581,ENST00000521518_5end | |association_with_transcript=0bp_to_ENST00000423554,ENST00000517448,ENST00000517938,ENST00000518651,ENST00000519501,ENST00000520461,ENST00000520581,ENST00000521518_5end | ||
|cluster_id=chr5:154230130..154230210,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_C5orf4_5end | |description=CAGE_peak_1_at_C5orf4_5end | ||
|id=chr5:154230130..154230210,- | |id=chr5:154230130..154230210,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.30e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.43e-43!115;UBERON:0001049!1.63e-27!57;UBERON:0005068!1.63e-27!57;UBERON:0006241!1.63e-27!57;UBERON:0007135!1.63e-27!57;UBERON:0005743!2.49e-27!86;UBERON:0001017!3.87e-26!82;UBERON:0002616!4.97e-26!59;UBERON:0002346!6.17e-26!90;UBERON:0000073!1.64e-25!94;UBERON:0001016!1.64e-25!94;UBERON:0003075!2.78e-25!86;UBERON:0007284!2.78e-25!86;UBERON:0000955!2.20e-24!69;UBERON:0006238!2.20e-24!69;UBERON:0000033!9.54e-23!123;UBERON:0000153!1.14e-22!129;UBERON:0007811!1.14e-22!129;UBERON:0000924!1.54e-22!173;UBERON:0006601!1.54e-22!173;UBERON:0004121!9.04e-22!169;UBERON:0003080!2.52e-20!42;UBERON:0002780!5.68e-20!41;UBERON:0001890!5.68e-20!41;UBERON:0006240!5.68e-20!41;UBERON:0000468!1.00e-19!659;UBERON:0000475!9.28e-18!365;UBERON:0003056!3.50e-17!61;UBERON:0001893!4.29e-17!34;UBERON:0002020!5.15e-17!34;UBERON:0003528!5.15e-17!34;UBERON:0002791!1.88e-16!33;UBERON:0001869!9.56e-16!32;UBERON:0000477!3.30e-15!286;UBERON:0004111!9.90e-15!241;UBERON:0000467!1.10e-12!625;UBERON:0002619!1.62e-12!22;UBERON:0000480!2.05e-12!626;UBERON:0000025!3.83e-12!194;UBERON:0000062!8.51e-12!511;UBERON:0000956!1.14e-11!25;UBERON:0000203!1.14e-11!25;UBERON:0001950!1.93e-11!20;UBERON:0000922!5.61e-11!612;UBERON:0000481!9.01e-11!347;UBERON:0000119!1.80e-10!312;UBERON:0000483!2.09e-10!309;UBERON:0002050!1.24e-09!605;UBERON:0005423!1.24e-09!605;UBERON:0000923!2.25e-09!604;UBERON:0005291!2.25e-09!604;UBERON:0006598!2.25e-09!604;UBERON:0002532!2.25e-09!604;UBERON:0003076!2.47e-08!15;UBERON:0003057!2.47e-08!15;UBERON:0000064!1.62e-07!219;UBERON:0004732!3.33e-07!13;UBERON:0002308!5.53e-07!9;UBERON:0000125!5.53e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.84e-15;34!UBERON:0000073;2.69e-15;53!UBERON:0002616;2.69e-15;53!UBERON:0002780;3.52e-15;41!UBERON:0001890;3.52e-15;41!UBERON:0003528;4.23e-15;34!UBERON:0002020;4.23e-15;34!UBERON:0002791;8.47e-15;32!UBERON:0001869;8.58e-15;32!UBERON:0002619;5.44e-13;22!UBERON:0000956;3.80e-12;25!UBERON:0000203;3.80e-12;25!UBERON:0001017;4.26e-12;75!UBERON:0007023;6.23e-12;114!UBERON:0001950;7.29e-12;20!UBERON:0000955;5.90e-11;68!UBERON:0001016;3.80e-09;83!UBERON:0004732;1.58e-07;13!UBERON:0000125;3.01e-07;9!UBERON:0002308;3.01e-07;9!UBERON:0002420;5.73e-07;9!UBERON:0007245;5.73e-07;9!UBERON:0010009;5.73e-07;9!UBERON:0010011;5.73e-07;9!UBERON:0000454;5.73e-07;9!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12!UBERON:0011216;9.18e-07;132 | |||
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| ||
|short_description=p1@C5orf4 | |short_description=p1@C5orf4 | ||
}} | }} |
Latest revision as of 12:19, 16 September 2015
Short description: | p1@C5orf4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C5orf4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000423554, ENST00000517448, ENST00000517938, ENST00000518651, ENST00000519501, ENST00000520461, ENST00000520581, ENST00000521518_5end |
EntrezGene: | C5orf4 |
HGNC: | 1334 |
UniProt: | B4DIE1E5RH66E5RH84E5RK01E5RJQ9E5RK16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data