FFCP PHASE1:Hg19::chr5:160973714..160973741,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2561 | |EntrezGene=2561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4082 | |HGNC=4082 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522758_5end | |association_with_transcript=0bp_to_ENST00000522758_5end | ||
|cluster_id=chr5:160973714..160973741,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GABRB2_5end | |description=CAGE_peak_1_at_GABRB2_5end | ||
|id=chr5:160973714..160973741,- | |id=chr5:160973714..160973741,- | ||
|ontology_enrichment_celltype=CL:0000945!1.46e-07!24;CL:0000826!1.46e-07!24 | |ontology_enrichment_celltype=CL:0000945!1.46e-07!24;CL:0000826!1.46e-07!24 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.67e-13;82!UBERON:0006215;1.93e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.26e-48!57;UBERON:0005068!2.26e-48!57;UBERON:0006241!2.26e-48!57;UBERON:0007135!2.26e-48!57;UBERON:0007023!1.45e-46!115;UBERON:0001017!4.69e-45!82;UBERON:0005743!1.42e-43!86;UBERON:0002780!7.53e-41!41;UBERON:0001890!7.53e-41!41;UBERON:0006240!7.53e-41!41;UBERON:0002616!3.75e-40!59;UBERON:0003080!1.64e-39!42;UBERON:0000073!1.40e-38!94;UBERON:0001016!1.40e-38!94;UBERON:0000955!5.85e-38!69;UBERON:0006238!5.85e-38!69;UBERON:0001893!1.25e-36!34;UBERON:0002020!1.78e-36!34;UBERON:0003528!1.78e-36!34;UBERON:0002791!2.12e-35!33;UBERON:0001869!5.41e-35!32;UBERON:0002346!9.70e-34!90;UBERON:0003075!2.28e-33!86;UBERON:0007284!2.28e-33!86;UBERON:0000956!4.42e-27!25;UBERON:0000203!4.42e-27!25;UBERON:0003056!1.66e-26!61;UBERON:0002619!1.42e-25!22;UBERON:0001950!2.14e-23!20;UBERON:0000153!1.34e-21!129;UBERON:0007811!1.34e-21!129;UBERON:0000033!2.25e-20!123;UBERON:0000924!4.96e-19!173;UBERON:0006601!4.96e-19!173;UBERON:0004121!2.03e-18!169;UBERON:0002420!4.98e-11!9;UBERON:0007245!4.98e-11!9;UBERON:0010009!4.98e-11!9;UBERON:0010011!4.98e-11!9;UBERON:0000454!4.98e-11!9;UBERON:0002308!9.80e-11!9;UBERON:0000125!9.80e-11!9;UBERON:0003076!5.01e-10!15;UBERON:0003057!5.01e-10!15;UBERON:0000025!7.05e-10!194;UBERON:0000200!8.49e-09!6;UBERON:0009663!1.01e-08!7;UBERON:0001871!3.15e-08!7;UBERON:0004733!1.34e-07!12;UBERON:0002028!1.34e-07!12;UBERON:0007277!1.34e-07!12;UBERON:0001872!1.98e-07!5;UBERON:0002021!1.98e-07!5;UBERON:0004111!2.32e-07!241;UBERON:0000349!3.02e-07!5;UBERON:0004732!8.09e-07!13;UBERON:0002298!9.59e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.82e-48;32!UBERON:0001893;9.87e-47;34!UBERON:0003528;3.78e-46;34!UBERON:0002020;3.78e-46;34!UBERON:0002619;7.25e-46;22!UBERON:0002791;7.89e-45;32!UBERON:0002780;8.22e-43;41!UBERON:0001890;8.22e-43;41!UBERON:0001950;7.19e-42;20!UBERON:0000956;9.69e-40;25!UBERON:0000203;9.69e-40;25!UBERON:0000073;8.55e-39;53!UBERON:0002616;8.55e-39;53!UBERON:0001017;1.43e-30;75!UBERON:0000955;1.30e-28;68!UBERON:0001016;4.57e-26;83!UBERON:0002420;1.40e-15;9!UBERON:0007245;1.40e-15;9!UBERON:0010009;1.40e-15;9!UBERON:0010011;1.40e-15;9!UBERON:0000454;1.40e-15;9!UBERON:0000125;4.11e-15;9!UBERON:0002308;4.11e-15;9!UBERON:0000200;1.02e-14;6!UBERON:0007023;6.81e-13;114!UBERON:0002021;3.02e-12;5!UBERON:0001872;3.05e-12;5!UBERON:0001871;4.44e-12;6!UBERON:0000349;6.56e-12;5!UBERON:0009663;1.79e-11;7!UBERON:0004733;3.39e-11;12!UBERON:0002028;3.39e-11;12!UBERON:0004732;3.30e-10;13!UBERON:0000369;6.66e-10;4!UBERON:0002435;6.66e-10;4!UBERON:0000204;6.66e-10;4!UBERON:0011216;2.27e-09;132!UBERON:0002680;4.93e-09;9!UBERON:0001895;4.93e-09;9!UBERON:0002298;5.01e-09;6!UBERON:0001870;2.90e-08;3!UBERON:0005383;8.52e-08;3!UBERON:0005382;8.52e-08;3!UBERON:0001894;2.18e-07;7!UBERON:0000988;2.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.79e-75,81;UBERON:0001049,2.55e-74,56;UBERON:0005068,2.55e-74,56;UBERON:0006241,2.55e-74,56;UBERON:0007135,2.55e-74,56;UBERON:0000073,2.11e-69,53;UBERON:0002616,2.11e-69,53;UBERON:0001016,1.96e-66,89;UBERON:0000955,1.52e-61,68;UBERON:0006238,1.52e-61,68;UBERON:0002780,1.49e-59,41;UBERON:0001890,1.49e-59,41;UBERON:0003080,1.49e-59,41;UBERON:0006240,1.49e-59,41;UBERON:0001869,6.03e-54,32;UBERON:0001893,6.34e-54,34;UBERON:0003528,1.15e-53,34;UBERON:0002020,1.15e-53,34;UBERON:0002791,6.79e-50,32;UBERON:0003075,8.78e-49,82;UBERON:0007284,8.78e-49,82;UBERON:0002346,4.36e-48,86;UBERON:0002619,7.69e-46,22;UBERON:0001950,7.54e-42,20;UBERON:0000956,1.02e-39,25;UBERON:0000203,1.02e-39,25;UBERON:0003056,5.68e-39,61;UBERON:0010371,3.06e-37,104;UBERON:0007023,9.18e-37,114;UBERON:0004121,2.34e-32,171;UBERON:0000924,2.34e-32,171;UBERON:0006601,2.34e-32,171;UBERON:0010314,2.43e-29,132;UBERON:0011216,2.73e-25,223;UBERON:0000025,1.72e-17,192;UBERON:0002420,1.37e-15,9;UBERON:0007245,1.37e-15,9;UBERON:0010009,1.37e-15,9;UBERON:0010011,1.37e-15,9;UBERON:0000454,1.37e-15,9;UBERON:0003076,1.68e-15,15;UBERON:0003057,1.68e-15,15;UBERON:0000125,4.15e-15,9;UBERON:0002308,4.15e-15,9;UBERON:0000200,1.02e-14,6;UBERON:0001872,3.09e-12,5;UBERON:0002021,3.09e-12,5;UBERON:0001871,4.44e-12,6;UBERON:0000349,6.64e-12,5;UBERON:0009663,1.75e-11,7;UBERON:0004111,2.78e-11,240;UBERON:0004733,3.47e-11,12;UBERON:0002028,3.47e-11,12;UBERON:0007277,3.47e-11,12;UBERON:0004732,3.37e-10,13;UBERON:0000369,6.66e-10,4;UBERON:0002435,6.66e-10,4;UBERON:0000204,6.66e-10,4;UBERON:0010082,6.66e-10,4;UBERON:0002680,5.01e-09,9;UBERON:0001895,5.01e-09,9;UBERON:0010092,5.01e-09,9;UBERON:0002298,5.20e-09,6;UBERON:0001870,2.91e-08,3;UBERON:0005383,8.53e-08,3;UBERON:0005382,8.53e-08,3;UBERON:0000483,1.45e-07,306;UBERON:0000119,2.27e-07,309;UBERON:0001894,2.31e-07,7;UBERON:0006222,2.31e-07,7;UBERON:0000988,2.93e-07,3 | |||
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|short_description=p1@GABRB2 | |short_description=p1@GABRB2 | ||
}} | }} |
Latest revision as of 17:00, 16 September 2015
Short description: | p1@GABRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GABRB2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000522758_5end |
EntrezGene: | GABRB2 |
HGNC: | 4082 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data