FFCP PHASE1:Hg19::chr9:139913238..139913249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=20 | |EntrezGene=20 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=32 | |HGNC=32 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-435bp_to_uc004ckn.1_5end | |association_with_transcript=-435bp_to_uc004ckn.1_5end | ||
|cluster_id=chr9:139913238..139913249,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_21_at_ABCA2_5end | |description=CAGE_peak_21_at_ABCA2_5end | ||
|id=chr9:139913238..139913249,- | |id=chr9:139913238..139913249,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.53e-21;1!UBERON:0003056;4.52e-08;3!UBERON:0006241;5.01e-08;3!UBERON:0003057;5.01e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.21e-25!57;UBERON:0005068!5.21e-25!57;UBERON:0006241!5.21e-25!57;UBERON:0007135!5.21e-25!57;UBERON:0002780!2.21e-19!41;UBERON:0001890!2.21e-19!41;UBERON:0006240!2.21e-19!41;UBERON:0002616!8.22e-19!59;UBERON:0003080!1.02e-18!42;UBERON:0001017!7.40e-18!82;UBERON:0000073!1.88e-17!94;UBERON:0001016!1.88e-17!94;UBERON:0002791!1.97e-17!33;UBERON:0005743!2.37e-17!86;UBERON:0002020!9.66e-17!34;UBERON:0003528!9.66e-17!34;UBERON:0001893!1.02e-16!34;UBERON:0000955!1.74e-16!69;UBERON:0006238!1.74e-16!69;UBERON:0001869!2.32e-14!32;UBERON:0003075!1.72e-13!86;UBERON:0007284!1.72e-13!86;UBERON:0002346!2.70e-13!90;UBERON:0007023!1.16e-11!115;UBERON:0003056!3.61e-11!61;UBERON:0002619!6.19e-11!22;UBERON:0000956!1.95e-10!25;UBERON:0000203!1.95e-10!25;UBERON:0001950!1.05e-08!20;UBERON:0002308!2.56e-08!9;UBERON:0000125!2.56e-08!9;UBERON:0002420!2.83e-08!9;UBERON:0007245!2.83e-08!9;UBERON:0010009!2.83e-08!9;UBERON:0010011!2.83e-08!9;UBERON:0000454!2.83e-08!9;UBERON:0009663!4.11e-08!7;UBERON:0000153!4.99e-08!129;UBERON:0007811!4.99e-08!129;UBERON:0000033!8.70e-08!123;UBERON:0003076!1.77e-07!15;UBERON:0003057!1.77e-07!15;UBERON:0002298!4.17e-07!8;UBERON:0000924!6.49e-07!173;UBERON:0006601!6.49e-07!173;UBERON:0004121!7.21e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.53e-21;1!UBERON:0001785;1.53e-21;1!UBERON:0002464;1.53e-21;1!UBERON:0004904;1.53e-21;1!UBERON:0001021;1.53e-21;1!UBERON:0002038;2.08e-21;1!UBERON:0009661;2.08e-21;1!UBERON:0002950;2.08e-21;1!UBERON:0001891;2.08e-21;1!UBERON:0000125;1.79e-20;9!UBERON:0002308;1.79e-20;9!UBERON:0002780;2.67e-16;41!UBERON:0001890;2.67e-16;41!UBERON:0000073;2.74e-13;53!UBERON:0002616;2.74e-13;53!UBERON:0009663;2.31e-12;7!UBERON:0001894;2.98e-12;7!UBERON:0003714;1.82e-11;2!UBERON:0005162;1.82e-11;2!UBERON:0000122;1.82e-11;2!UBERON:0001897;3.34e-11;2!UBERON:0000007;3.34e-11;2!UBERON:0001954;3.34e-11;2!UBERON:0002148;3.34e-11;2!UBERON:0001875;3.34e-11;2!UBERON:0006331;3.34e-11;2!UBERON:0009662;3.34e-11;2!UBERON:0003022;3.34e-11;2!UBERON:0002421;3.34e-11;2!UBERON:0006514;3.34e-11;2!UBERON:0010225;3.34e-11;2!UBERON:0002600;3.34e-11;2!UBERON:0002420;7.91e-10;9!UBERON:0007245;7.91e-10;9!UBERON:0010009;7.91e-10;9!UBERON:0010011;7.91e-10;9!UBERON:0000454;7.91e-10;9!UBERON:0002791;3.42e-09;32!UBERON:0003528;1.06e-08;34!UBERON:0002020;1.06e-08;34!UBERON:0002240;5.01e-08;3!UBERON:0005174;5.01e-08;3!UBERON:0001137;5.01e-08;3!UBERON:0000988;6.78e-08;3!UBERON:0007023;7.64e-08;114!UBERON:0001016;3.10e-07;83!UBERON:0004732;4.26e-07;13!UBERON:0001893;5.94e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.70e-22,56;UBERON:0005068,6.70e-22,56;UBERON:0006241,6.70e-22,56;UBERON:0007135,6.70e-22,56;UBERON:0000941,1.53e-21,1;UBERON:0001785,1.53e-21,1;UBERON:0002464,1.53e-21,1;UBERON:0004904,1.53e-21,1;UBERON:0001021,1.53e-21,1;UBERON:0003902,1.53e-21,1;UBERON:0005425,1.53e-21,1;UBERON:0002038,1.88e-21,1;UBERON:0009661,1.88e-21,1;UBERON:0002950,1.88e-21,1;UBERON:0001891,1.88e-21,1;UBERON:0009616,1.88e-21,1;UBERON:0010286,1.88e-21,1;UBERON:0000125,1.62e-20,9;UBERON:0002308,1.62e-20,9;UBERON:0003075,5.63e-19,82;UBERON:0007284,5.63e-19,82;UBERON:0002346,4.35e-18,86;UBERON:0000073,9.70e-18,53;UBERON:0002616,9.70e-18,53;UBERON:0001016,4.37e-17,89;UBERON:0002780,6.75e-17,41;UBERON:0001890,6.75e-17,41;UBERON:0003080,6.75e-17,41;UBERON:0006240,6.75e-17,41;UBERON:0003056,1.81e-15,61;UBERON:0001017,5.89e-15,81;UBERON:0010371,6.34e-15,104;UBERON:0003528,2.80e-14,34;UBERON:0002020,2.80e-14,34;UBERON:0007023,1.03e-13,114;UBERON:0000955,1.21e-13,68;UBERON:0006238,1.21e-13,68;UBERON:0009663,2.37e-12,7;UBERON:0001894,2.51e-12,7;UBERON:0006222,2.51e-12,7;UBERON:0010314,1.08e-11,132;UBERON:0003714,1.82e-11,2;UBERON:0005162,1.82e-11,2;UBERON:0000122,1.82e-11,2;UBERON:0001897,2.47e-11,2;UBERON:0010225,2.47e-11,2;UBERON:0002148,2.73e-11,2;UBERON:0006331,2.73e-11,2;UBERON:0009662,2.73e-11,2;UBERON:0000007,3.35e-11,2;UBERON:0001875,3.70e-11,2;UBERON:0006514,3.70e-11,2;UBERON:0001954,4.09e-11,2;UBERON:0003022,4.09e-11,2;UBERON:0002421,4.09e-11,2;UBERON:0002600,4.09e-11,2;UBERON:0002791,5.74e-10,32;UBERON:0002420,8.09e-10,9;UBERON:0007245,8.09e-10,9;UBERON:0010009,8.09e-10,9;UBERON:0010011,8.09e-10,9;UBERON:0000454,8.09e-10,9;UBERON:0001893,2.04e-09,34;UBERON:0004121,8.07e-09,171;UBERON:0000924,8.07e-09,171;UBERON:0006601,8.07e-09,171;UBERON:0002240,5.18e-08,3;UBERON:0005174,5.18e-08,3;UBERON:0001137,5.18e-08,3;UBERON:0000988,5.93e-08,3;UBERON:0004732,4.00e-07,13 | |||
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|short_description=p21@ABCA2 | |short_description=p21@ABCA2 | ||
}} | }} |
Latest revision as of 15:07, 16 September 2015
Short description: | p21@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_ABCA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -435bp_to_uc004ckn.1_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data