FFCP PHASE1:Hg19::chr7:45197383..45197437,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10268 | |EntrezGene=10268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9845 | |HGNC=9845 | ||
|TSSclassifier=strong | |||
|UniProt=O60896 | |UniProt=O60896 | ||
|association_with_transcript=0bp_to_ENST00000242249,ENST00000481345,ENST00000496212_5end | |association_with_transcript=0bp_to_ENST00000242249,ENST00000481345,ENST00000496212_5end | ||
|cluster_id=chr7:45197383..45197437,+ | |||
|coexpression_cluster_id=C2237 | |||
|description=CAGE_peak_1_at_RAMP3_5end | |description=CAGE_peak_1_at_RAMP3_5end | ||
|id=chr7:45197383..45197437,+ | |id=chr7:45197383..45197437,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.12e-14;82!UBERON:0002532;9.17e-08;206!UBERON:0010316;9.17e-08;206!UBERON:0004872;9.83e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007023;3.00e-27;114!UBERON:0002780;5.45e-24;41!UBERON:0001890;5.45e-24;41!UBERON:0000073;8.62e-23;53!UBERON:0002616;8.62e-23;53!UBERON:0003528;2.77e-22;34!UBERON:0002020;2.77e-22;34!UBERON:0001893;4.37e-22;34!UBERON:0002791;1.22e-21;32!UBERON:0001869;1.61e-21;32!UBERON:0002619;1.93e-19;22!UBERON:0000956;5.25e-18;25!UBERON:0000203;5.25e-18;25!UBERON:0001950;2.01e-17;20!UBERON:0000955;5.14e-14;68!UBERON:0001017;1.25e-13;75!UBERON:0001016;8.22e-12;83!UBERON:0000125;4.65e-10;9!UBERON:0002308;4.65e-10;9!UBERON:0002298;4.86e-09;6!UBERON:0000922;6.06e-09;49!UBERON:0004732;9.32e-09;13!UBERON:0001894;3.97e-08;7!UBERON:0004733;1.04e-07;12!UBERON:0002028;1.04e-07;12!UBERON:0009663;1.14e-07;7!UBERON:0002420;1.58e-07;9!UBERON:0007245;1.58e-07;9!UBERON:0010009;1.58e-07;9!UBERON:0010011;1.58e-07;9!UBERON:0000454;1.58e-07;9!UBERON:0011216;4.87e-07;132!UBERON:0000200;9.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.43e-107,114;UBERON:0001049,9.06e-43,56;UBERON:0005068,9.06e-43,56;UBERON:0006241,9.06e-43,56;UBERON:0007135,9.06e-43,56;UBERON:0000073,3.29e-39,53;UBERON:0002616,3.29e-39,53;UBERON:0001017,4.14e-34,81;UBERON:0002346,8.34e-34,86;UBERON:0003075,1.48e-33,82;UBERON:0007284,1.48e-33,82;UBERON:0002780,9.69e-33,41;UBERON:0001890,9.69e-33,41;UBERON:0003080,9.69e-33,41;UBERON:0006240,9.69e-33,41;UBERON:0000955,1.95e-31,68;UBERON:0006238,1.95e-31,68;UBERON:0001016,1.91e-30,89;UBERON:0003528,2.64e-26,34;UBERON:0002020,2.64e-26,34;UBERON:0001893,4.56e-26,34;UBERON:0010371,8.13e-25,104;UBERON:0002791,5.76e-24,32;UBERON:0011216,6.61e-24,223;UBERON:0001869,8.89e-24,32;UBERON:0010314,1.80e-23,132;UBERON:0003056,2.24e-22,61;UBERON:0002619,2.48e-19,22;UBERON:0004121,1.05e-18,171;UBERON:0000924,1.05e-18,171;UBERON:0006601,1.05e-18,171;UBERON:0000956,6.98e-18,25;UBERON:0000203,6.98e-18,25;UBERON:0001950,2.47e-17,20;UBERON:0004111,3.58e-15,240;UBERON:0000025,1.13e-13,192;UBERON:0003076,5.93e-11,15;UBERON:0003057,5.93e-11,15;UBERON:0000125,4.65e-10,9;UBERON:0002308,4.65e-10,9;UBERON:0002298,4.97e-09,6;UBERON:0004732,9.06e-09,13;UBERON:0001894,3.87e-08,7;UBERON:0006222,3.87e-08,7;UBERON:0000922,4.29e-08,592;UBERON:0002050,7.42e-08,564;UBERON:0004733,9.81e-08,12;UBERON:0002028,9.81e-08,12;UBERON:0007277,9.81e-08,12;UBERON:0000923,9.96e-08,560;UBERON:0010316,9.96e-08,560;UBERON:0005291,9.96e-08,560;UBERON:0006598,9.96e-08,560;UBERON:0010317,9.96e-08,560;UBERON:0002532,9.96e-08,560;UBERON:0009663,1.13e-07,7;UBERON:0005423,1.33e-07,581;UBERON:0002420,1.64e-07,9;UBERON:0007245,1.64e-07,9;UBERON:0010009,1.64e-07,9;UBERON:0010011,1.64e-07,9;UBERON:0000454,1.64e-07,9;UBERON:0000483,2.03e-07,306;UBERON:0000119,3.63e-07,309;UBERON:0000200,9.67e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,1.56727360739044,1.14494394852423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63239701580021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0.786021525498329,0.205601498999509,0,0,0,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,1.03988298880475,0,0,38.5733377340764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,1.29208379584664,0.71153252537342,1.00416183829401,0.402829317109147,7.60272105718513,2.68468263302986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.207322110030741,1.51392510525377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,1.26755034821831,4.91413608338813,33.67502468084,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,5.70762456703795,80.6008485918461,70.3958652917795,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,25.245047853692,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.1719766159446,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,0.714695326373367,0.411362273086194,0,1.62009431171434,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.0427962465733,0,4.34629198682166,0,0,0.593929361665277,0,0.994147647766298,10.2688673979674,0,0,0,28.691710308154,17.4058866784623,0,0,0,0,0,0,0,14.895154251177,4.7896618469388,0,10.6626602070474,12.7092294481736,11.9768278800717,0,0,39.8749766489136,0,0,0,0,0,0.347249989866585,9.74315524395223,4.82385754501632,0,3.09621927807429,5.91095237907095,10.7498844605447,0,0,30.703153143015,0,0,0,0,4.14701507651495,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,7.96209544862804,14.5070405785476,12.2206028986725,0,0,0,17.3894923090147,15.248975298677,13.821602297795,0,0,0,8.68085686268659,12.0990716048664,1.22429104652196,41.5767693955451,0,0,0,0,0,0,0,0,0,0,0,12.5803201134262,0,0,0,0,20.1737154295912,0,15.3666903730762,0,0,5.57135004411733,0,0,31.5910432214242,0,0,0,0,0,0,0,0,0,0,0,7.20504346451747,7.25598508127563,0,0,0,61.7214106811682,45.3737639543134,81.8375248017568,37.3399730933113,63.0962290760759,65.1660655730268,14.6459970021063,0,0,0,0,0,0,0,10.3379859675209,11.1686793011492,0.321506296930038,0.412618309791701,0,0,0,6.31795389243457,0,32.3891456999704,13.6381929150995,0,0,0,51.4580634988824,37.7392423108296,0.25426853765475,0,0,0,0,0,0,0.226624183040251,10.9914175258562,5.30027555648885,21.7195366687405,18.1158664387485,0,0,102.302341239852,27.3535490873419,118.058130773951,17.3658107634183,0,0,0,8.16026705054211,16.2948431114755,8.88402172614039,5.90170735277648,0,7.97461361970287,3.41673541725497,6.25954653532499,27.5236413931234,17.8595772974332,37.568323779537,0,0,0,1.14186133417987,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05118024373827,0,0,0,0,0,0,0.19998739585493,0,0.861074898304078,0,0,0,0.622077260032973,0,0,0,0,3.22491806912648,0,0.743614585554013,0,0,0,0,0,0,5.45948413319906,9.91876034279095,5.42755120794314,5.74325819874114,4.03314713954749,8.36802754817036,4.03689114079628,17.1323304310985,0,0,0,0,0,0,0,11.2063389240393,0,9.37816813479711,0,0,0,9.99556252352241,9.37293718336617,4.75379631952723,8.18063951501398,6.01672289920042,9.86863980342928,46.6438507685937,5.45200857514824,0,5.89272019466115,5.71682327772001,9.71144966778611,10.4724608021597,9.75726071789027,0,0,17.1963424431384,9.53705216661312,0,0,19.544780119778,3.77077415798405,0,6.39211104356647,0,0,47.9607611425364,0,0,0,0,0,0,0,5.16272830584333,0,0,13.9717726563007,0,0.31020638566432,0,0,0,0,13.5960055809458,23.3044571563681,1.1598144313382,6.79995390282795,0,0,0,0,0,0,10.3413371864646,3.49695296806332,0,17.8958274880351,0,42.991554298173,19.6050624215877,9.7210817344182,0,5.54505116081136,10.5710936276667,0,0,0,0,18.9887460944094,13.7618785021362,19.2075041422945,0,9.79077458749172,1.74540276136151,17.9869125775236,0,0,0,0,0,0,0,0,0,0,14.549510057902,1.87574891109325,8.29169439458779,11.0673305572228,23.0292700453059,10.9509638473321,1.48554492622814,4.22108057211834,0,24.313214462259,32.3387502333151,23.0779752770779,9.24029912930259,21.4853049116534,27.8282156923584,12.9737539052945,0,0,0,0,18.7712753922763,24.4482888365733,8.95171592294625,32.6220819350901,29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| ||
|short_description=p1@RAMP3 | |short_description=p1@RAMP3 | ||
}} | }} |
Latest revision as of 18:47, 18 September 2015
Short description: | p1@RAMP3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAMP3_5end |
Coexpression cluster: | C2237_lung_heart_adipose_breast_left_MCF7_retina |
Association with transcript: | 0bp_to_ENST00000242249, ENST00000481345, ENST00000496212_5end |
EntrezGene: | RAMP3 |
HGNC: | 9845 |
UniProt: | O60896 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data