FFCP PHASE1:Hg19::chr7:150783553..150783570,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116988 | |EntrezGene=116988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16923 | |HGNC=16923 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETI2,E9PAL8,Q96P47,Q86XV5 | |UniProt=E7ETI2,E9PAL8,Q96P47,Q86XV5 | ||
|association_with_transcript=-255bp_to_ENST00000397232,NM_001042535,NM_031946,uc003wjf.1,uc003wjg.1,uc010lpy.1_5end | |association_with_transcript=-255bp_to_ENST00000397232,NM_001042535,NM_031946,uc003wjf.1,uc003wjg.1,uc010lpy.1_5end | ||
|cluster_id=chr7:150783553..150783570,+ | |||
|coexpression_cluster_id=C4665 | |||
|description=CAGE_peak_1_at_AGAP3_5end | |description=CAGE_peak_1_at_AGAP3_5end | ||
|id=chr7:150783553..150783570,+ | |id=chr7:150783553..150783570,+ | ||
|ontology_enrichment_celltype=CL:0002009!9.80e-14!65;CL:0002057!2.36e-13!42;CL:0000557!3.85e-13!71;CL:0002194!6.27e-13!63;CL:0000576!6.27e-13!63;CL:0000040!6.27e-13!63;CL:0000559!6.27e-13!63;CL:0000860!1.15e-12!45;CL:0000839!2.97e-11!70;CL:0000115!6.64e-11!35;CL:0000766!6.72e-11!76;CL:0002078!8.63e-10!44;CL:0000213!5.37e-07!57;CL:0000215!5.37e-07!57;CL:0002139!6.58e-07!24;CL:0000071!8.48e-07!18;CL:0002546!8.48e-07!18 | |ontology_enrichment_celltype=CL:0002009!9.80e-14!65;CL:0002057!2.36e-13!42;CL:0000557!3.85e-13!71;CL:0002194!6.27e-13!63;CL:0000576!6.27e-13!63;CL:0000040!6.27e-13!63;CL:0000559!6.27e-13!63;CL:0000860!1.15e-12!45;CL:0000839!2.97e-11!70;CL:0000115!6.64e-11!35;CL:0000766!6.72e-11!76;CL:0002078!8.63e-10!44;CL:0000213!5.37e-07!57;CL:0000215!5.37e-07!57;CL:0002139!6.58e-07!24;CL:0000071!8.48e-07!18;CL:0002546!8.48e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-15;33!CL:0002057;1.04e-15;33!CL:0000473;1.17e-15;39!CL:0000234;1.17e-15;39!CL:0000115;1.43e-09;36!CL:0000576;2.30e-08;48!CL:0002078;2.74e-07;45!CL:0002139;6.43e-07;24!CL:0000071;9.79e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.61e-16,48;CL:0000234,2.61e-16,48;CL:0002009,9.99e-15,61;CL:0000557,5.30e-14,67;CL:0002194,6.82e-14,59;CL:0000576,6.82e-14,59;CL:0000040,6.82e-14,59;CL:0000559,6.82e-14,59;CL:0000860,2.36e-13,42;CL:0002057,2.36e-13,42;CL:0000839,5.26e-12,66;CL:0000766,1.42e-11,72;CL:0000115,3.07e-11,36;CL:0002078,4.12e-10,45;CL:0000213,2.87e-07,58;CL:0000215,2.87e-07,58;CL:0002139,6.58e-07,24;CL:0000071,8.48e-07,18;CL:0002546,8.48e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.34e-10;42!CL:0002546;9.79e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.01e-25!57;UBERON:0005068!7.01e-25!57;UBERON:0006241!7.01e-25!57;UBERON:0007135!7.01e-25!57;UBERON:0005743!8.37e-23!86;UBERON:0000073!1.79e-22!94;UBERON:0001016!1.79e-22!94;UBERON:0001017!1.31e-21!82;UBERON:0002616!7.37e-21!59;UBERON:0002346!1.27e-19!90;UBERON:0003080!2.75e-19!42;UBERON:0003075!3.89e-19!86;UBERON:0007284!3.89e-19!86;UBERON:0002780!5.36e-19!41;UBERON:0001890!5.36e-19!41;UBERON:0006240!5.36e-19!41;UBERON:0000955!7.96e-19!69;UBERON:0006238!7.96e-19!69;UBERON:0003056!5.25e-17!61;UBERON:0001893!1.16e-16!34;UBERON:0002020!2.03e-16!34;UBERON:0003528!2.03e-16!34;UBERON:0000025!2.50e-16!194;UBERON:0002791!4.64e-16!33;UBERON:0001869!1.04e-15!32;UBERON:0002619!5.27e-14!22;UBERON:0002050!7.08e-13!605;UBERON:0005423!7.08e-13!605;UBERON:0000923!7.72e-13!604;UBERON:0005291!7.72e-13!604;UBERON:0006598!7.72e-13!604;UBERON:0002532!7.72e-13!604;UBERON:0001950!7.84e-13!20;UBERON:0000922!3.64e-12!612;UBERON:0000468!5.11e-12!659;UBERON:0000956!5.45e-12!25;UBERON:0000203!5.45e-12!25;UBERON:0000467!3.16e-11!625;UBERON:0000480!5.40e-11!626;UBERON:0002371!6.98e-11!80;UBERON:0004111!7.53e-11!241;UBERON:0000119!3.80e-10!312;UBERON:0000924!5.28e-10!173;UBERON:0006601!5.28e-10!173;UBERON:0000483!6.39e-10!309;UBERON:0004121!1.57e-09!169;UBERON:0001474!3.43e-09!86;UBERON:0000033!1.51e-08!123;UBERON:0000477!6.91e-08!286;UBERON:0003081!1.20e-07!216;UBERON:0002405!1.56e-07!115;UBERON:0000062!2.14e-07!511;UBERON:0004765!2.61e-07!101;UBERON:0001434!2.61e-07!101;UBERON:0000153!7.46e-07!129;UBERON:0007811!7.46e-07!129;UBERON:0003076!8.20e-07!15;UBERON:0003057!8.20e-07!15;UBERON:0001986!8.48e-07!18;UBERON:0004638!8.48e-07!18;UBERON:0004852!8.48e-07!18 | |ontology_enrichment_uberon=UBERON:0001049!7.01e-25!57;UBERON:0005068!7.01e-25!57;UBERON:0006241!7.01e-25!57;UBERON:0007135!7.01e-25!57;UBERON:0005743!8.37e-23!86;UBERON:0000073!1.79e-22!94;UBERON:0001016!1.79e-22!94;UBERON:0001017!1.31e-21!82;UBERON:0002616!7.37e-21!59;UBERON:0002346!1.27e-19!90;UBERON:0003080!2.75e-19!42;UBERON:0003075!3.89e-19!86;UBERON:0007284!3.89e-19!86;UBERON:0002780!5.36e-19!41;UBERON:0001890!5.36e-19!41;UBERON:0006240!5.36e-19!41;UBERON:0000955!7.96e-19!69;UBERON:0006238!7.96e-19!69;UBERON:0003056!5.25e-17!61;UBERON:0001893!1.16e-16!34;UBERON:0002020!2.03e-16!34;UBERON:0003528!2.03e-16!34;UBERON:0000025!2.50e-16!194;UBERON:0002791!4.64e-16!33;UBERON:0001869!1.04e-15!32;UBERON:0002619!5.27e-14!22;UBERON:0002050!7.08e-13!605;UBERON:0005423!7.08e-13!605;UBERON:0000923!7.72e-13!604;UBERON:0005291!7.72e-13!604;UBERON:0006598!7.72e-13!604;UBERON:0002532!7.72e-13!604;UBERON:0001950!7.84e-13!20;UBERON:0000922!3.64e-12!612;UBERON:0000468!5.11e-12!659;UBERON:0000956!5.45e-12!25;UBERON:0000203!5.45e-12!25;UBERON:0000467!3.16e-11!625;UBERON:0000480!5.40e-11!626;UBERON:0002371!6.98e-11!80;UBERON:0004111!7.53e-11!241;UBERON:0000119!3.80e-10!312;UBERON:0000924!5.28e-10!173;UBERON:0006601!5.28e-10!173;UBERON:0000483!6.39e-10!309;UBERON:0004121!1.57e-09!169;UBERON:0001474!3.43e-09!86;UBERON:0000033!1.51e-08!123;UBERON:0000477!6.91e-08!286;UBERON:0003081!1.20e-07!216;UBERON:0002405!1.56e-07!115;UBERON:0000062!2.14e-07!511;UBERON:0004765!2.61e-07!101;UBERON:0001434!2.61e-07!101;UBERON:0000153!7.46e-07!129;UBERON:0007811!7.46e-07!129;UBERON:0003076!8.20e-07!15;UBERON:0003057!8.20e-07!15;UBERON:0001986!8.48e-07!18;UBERON:0004638!8.48e-07!18;UBERON:0004852!8.48e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.18e-14;34!UBERON:0001869;3.05e-14;32!UBERON:0003528;3.72e-14;34!UBERON:0002020;3.72e-14;34!UBERON:0002791;3.84e-14;32!UBERON:0002619;5.46e-14;22!UBERON:0002780;5.85e-14;41!UBERON:0001890;5.85e-14;41!UBERON:0000073;1.68e-13;53!UBERON:0002616;1.68e-13;53!UBERON:0001950;8.15e-13;20!UBERON:0000956;4.80e-12;25!UBERON:0000203;4.80e-12;25!UBERON:0000955;1.22e-09;68!UBERON:0001017;4.10e-08;75!UBERON:0001016;5.50e-08;83!UBERON:0004638;9.79e-07;18!UBERON:0001986;9.79e-07;18!UBERON:0004852;9.79e-07;18 | |||
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| ||
|short_description=p1@AGAP3 | |short_description=p1@AGAP3 | ||
}} | }} |
Latest revision as of 05:38, 17 September 2015
Short description: | p1@AGAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AGAP3_5end |
Coexpression cluster: | C4665_CD14_amygdala_brain_temporal_medial_occipital_hippocampus |
Association with transcript: | -255bp_to_ENST00000397232, NM_001042535, NM_031946, uc003wjf.1, uc003wjg.1, uc010lpy.1_5end |
EntrezGene: | AGAP3 |
HGNC: | 16923 |
UniProt: | E7ETI2E9PAL8Q96P47Q86XV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.61e-16 | 48 |
phagocyte | 2.61e-16 | 48 |
macrophage dendritic cell progenitor | 9.99e-15 | 61 |
granulocyte monocyte progenitor cell | 5.30e-14 | 67 |
monopoietic cell | 6.82e-14 | 59 |
monocyte | 6.82e-14 | 59 |
monoblast | 6.82e-14 | 59 |
promonocyte | 6.82e-14 | 59 |
classical monocyte | 2.36e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.36e-13 | 42 |
myeloid lineage restricted progenitor cell | 5.26e-12 | 66 |
myeloid leukocyte | 1.42e-11 | 72 |
endothelial cell | 3.07e-11 | 36 |
meso-epithelial cell | 4.12e-10 | 45 |
lining cell | 2.87e-07 | 58 |
barrier cell | 2.87e-07 | 58 |
endothelial cell of vascular tree | 6.58e-07 | 24 |
blood vessel endothelial cell | 8.48e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.48e-07 | 18 |