FFCP PHASE1:Hg19::chr1:201857798..201857813,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149345 | |EntrezGene=149345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27139 | |HGNC=27139 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DD7 | |UniProt=Q96DD7 | ||
|association_with_transcript=0bp_to_ENST00000464117,NM_198149_5end | |association_with_transcript=0bp_to_ENST00000464117,NM_198149_5end | ||
|cluster_id=chr1:201857798..201857813,+ | |||
|coexpression_cluster_id=C1667 | |coexpression_cluster_id=C1667 | ||
|description=CAGE_peak_2_at_SHISA4_5end | |description=CAGE_peak_2_at_SHISA4_5end | ||
|id=chr1:201857798..201857813,+ | |id=chr1:201857798..201857813,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000055!1.51e-13!180 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.38e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001893;1.59e-15;34!UBERON:0000073;1.72e-15;53!UBERON:0002616;1.72e-15;53!UBERON:0003528;2.76e-15;34!UBERON:0002020;2.76e-15;34!UBERON:0001869;5.50e-15;32!UBERON:0002791;6.33e-15;32!UBERON:0002780;6.56e-15;41!UBERON:0001890;6.56e-15;41!UBERON:0000955;2.33e-12;68!UBERON:0001017;3.06e-12;75!UBERON:0000956;3.45e-12;25!UBERON:0000203;3.45e-12;25!UBERON:0002619;1.17e-11;22!UBERON:0001950;2.00e-10;20!UBERON:0001016;1.63e-09;83!UBERON:0007023;5.08e-09;114!UBERON:0004732;3.55e-08;13!UBERON:0004733;1.71e-07;12!UBERON:0002028;1.71e-07;12!UBERON:0000125;3.36e-07;9!UBERON:0002308;3.36e-07;9!UBERON:0002420;3.64e-07;9!UBERON:0007245;3.64e-07;9!UBERON:0010009;3.64e-07;9!UBERON:0010011;3.64e-07;9!UBERON:0000454;3.64e-07;9!UBERON:0010314;9.86e-07;132 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.72e-33!365;UBERON:0007023!6.74e-32!115;UBERON:0005743!4.61e-28!86;UBERON:0003075!1.87e-27!86;UBERON:0007284!1.87e-27!86;UBERON:0001049!1.93e-27!57;UBERON:0005068!1.93e-27!57;UBERON:0006241!1.93e-27!57;UBERON:0007135!1.93e-27!57;UBERON:0001017!3.91e-27!82;UBERON:0000955!2.40e-26!69;UBERON:0006238!2.40e-26!69;UBERON:0000477!1.01e-25!286;UBERON:0000073!2.03e-25!94;UBERON:0001016!2.03e-25!94;UBERON:0002616!5.82e-25!59;UBERON:0000033!9.92e-25!123;UBERON:0000025!1.42e-24!194;UBERON:0002346!4.42e-24!90;UBERON:0000481!4.52e-24!347;UBERON:0004111!4.62e-24!241;UBERON:0000153!4.07e-23!129;UBERON:0007811!4.07e-23!129;UBERON:0000483!6.99e-23!309;UBERON:0000119!4.18e-22!312;UBERON:0004121!6.11e-22!169;UBERON:0000468!5.24e-20!659;UBERON:0000924!5.74e-20!173;UBERON:0006601!5.74e-20!173;UBERON:0002780!6.16e-20!41;UBERON:0001890!6.16e-20!41;UBERON:0006240!6.16e-20!41;UBERON:0003080!1.16e-19!42;UBERON:0003056!3.76e-19!61;UBERON:0001893!3.61e-17!34;UBERON:0002020!4.44e-17!34;UBERON:0003528!4.44e-17!34;UBERON:0000467!1.30e-16!625;UBERON:0002791!1.52e-16!33;UBERON:0000480!2.69e-16!626;UBERON:0001869!6.34e-16!32;UBERON:0000923!6.46e-13!604;UBERON:0005291!6.46e-13!604;UBERON:0006598!6.46e-13!604;UBERON:0002532!6.46e-13!604;UBERON:0000922!6.85e-13!612;UBERON:0002050!7.89e-13!605;UBERON:0005423!7.89e-13!605;UBERON:0000064!1.10e-12!219;UBERON:0000956!9.40e-12!25;UBERON:0000203!9.40e-12!25;UBERON:0000062!2.01e-11!511;UBERON:0002619!3.32e-11!22;UBERON:0001950!5.01e-10!20;UBERON:0003076!6.01e-09!15;UBERON:0003057!6.01e-09!15;UBERON:0005256!2.20e-08!143;UBERON:0002100!2.44e-08!216;UBERON:0004732!6.42e-08!13;UBERON:0004733!2.90e-07!12;UBERON:0002028!2.90e-07!12;UBERON:0007277!2.90e-07!12;UBERON:0003914!4.22e-07!118;UBERON:0003103!4.96e-07!69;UBERON:0002308!5.94e-07!9;UBERON:0000125!5.94e-07!9;UBERON:0002420!6.34e-07!9;UBERON:0007245!6.34e-07!9;UBERON:0010009!6.34e-07!9;UBERON:0010011!6.34e-07!9;UBERON:0000454!6.34e-07!9;UBERON:0000914!9.62e-07!83;UBERON:0002329!9.62e-07!83;UBERON:0003077!9.62e-07!83;UBERON:0003059!9.62e-07!83;UBERON:0007282!9.62e-07!83;UBERON:0009618!9.62e-07!83;UBERON:0007285!9.62e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.59e-15;34!UBERON:0000073;1.72e-15;53!UBERON:0002616;1.72e-15;53!UBERON:0003528;2.76e-15;34!UBERON:0002020;2.76e-15;34!UBERON:0001869;5.50e-15;32!UBERON:0002791;6.33e-15;32!UBERON:0002780;6.56e-15;41!UBERON:0001890;6.56e-15;41!UBERON:0000955;2.33e-12;68!UBERON:0001017;3.06e-12;75!UBERON:0000956;3.45e-12;25!UBERON:0000203;3.45e-12;25!UBERON:0002619;1.17e-11;22!UBERON:0001950;2.00e-10;20!UBERON:0001016;1.63e-09;83!UBERON:0007023;5.08e-09;114!UBERON:0004732;3.55e-08;13!UBERON:0004733;1.71e-07;12!UBERON:0002028;1.71e-07;12!UBERON:0000125;3.36e-07;9!UBERON:0002308;3.36e-07;9!UBERON:0002420;3.64e-07;9!UBERON:0007245;3.64e-07;9!UBERON:0010009;3.64e-07;9!UBERON:0010011;3.64e-07;9!UBERON:0000454;3.64e-07;9!UBERON:0010314;9.86e-07;132 | |||
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| ||
|short_description=p2@SHISA4 | |short_description=p2@SHISA4 | ||
}} | }} |
Latest revision as of 19:13, 19 September 2015
Short description: | p2@SHISA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHISA4_5end |
Coexpression cluster: | C1667_corpus_diaphragm_globus_tongue_diencephalon_optic_thalamus |
Association with transcript: | 0bp_to_ENST00000464117, NM_198149_5end |
EntrezGene: | SHISA4 |
HGNC: | 27139 |
UniProt: | Q96DD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data