FFCP PHASE1:Hg19::chr22:19512824..19512885,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:19512824..19512885,-
|short_description=p2@CLDN5
|description=CAGE_peak_2_at_CLDN5_5end
|association_with_transcript=0bp_to_NM_001130861,NM_003277,uc002zp...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7122 | |EntrezGene=7122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2047 | |HGNC=2047 | ||
|TSSclassifier=strong | |||
|UniProt=D3DX19,O00501 | |UniProt=D3DX19,O00501 | ||
|association_with_transcript=0bp_to_NM_001130861,NM_003277,uc002zpu.2,uc010grr.2_5end | |||
|cluster_id=chr22:19512824..19512885,- | |||
|coexpression_cluster_id=C4088 | |||
|description=CAGE_peak_2_at_CLDN5_5end | |||
|id=chr22:19512824..19512885,- | |||
|ontology_enrichment_celltype=CL:0002139!8.70e-21!24;CL:0000115!1.98e-20!35;CL:0002078!2.11e-14!44;CL:0000071!1.40e-13!18;CL:0002546!1.40e-13!18;CL:0000213!3.09e-09!57;CL:0000215!3.09e-09!57;CL:0005020!3.32e-09!6;CL:0002138!3.32e-09!6;CL:0005022!3.32e-09!6;CL:0002543!2.38e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.72e-22;24!CL:0000115;1.09e-19;36!CL:0000071;8.88e-14;18!CL:0002078;1.80e-10;45!CL:0002138;2.38e-10;6!CL:0002543;2.58e-09;6!CL:0000213;3.51e-07;58!CL:0000215;3.51e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.39e-23,36;CL:0002139,7.01e-22,24;CL:0002078,6.27e-17,45;CL:0000071,8.95e-14,18;CL:0002546,8.95e-14,18;CL:0000213,2.62e-11,58;CL:0000215,2.62e-11,58;CL:0005020,2.49e-10,6;CL:0002138,2.49e-10,6;CL:0005022,2.49e-10,6;CL:0002543,2.37e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;8.88e-14;18!UBERON:0006601;1.09e-10;82!CL:0005022;2.38e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;1.95e-23;34!UBERON:0002020;1.95e-23;34!UBERON:0001893;3.99e-23;34!UBERON:0002791;3.98e-22;32!UBERON:0001869;8.06e-22;32!UBERON:0002780;1.90e-21;41!UBERON:0001890;1.90e-21;41!UBERON:0000073;3.70e-21;53!UBERON:0002616;3.70e-21;53!UBERON:0002619;8.34e-20;22!UBERON:0007023;6.34e-19;114!UBERON:0001950;2.34e-17;20!UBERON:0000956;8.22e-17;25!UBERON:0000203;8.22e-17;25!UBERON:0004638;8.88e-14;18!UBERON:0001986;8.88e-14;18!UBERON:0004852;8.88e-14;18!UBERON:0001017;1.01e-13;75!UBERON:0000955;2.06e-13;68!UBERON:0000125;1.06e-12;9!UBERON:0002308;1.06e-12;9!UBERON:0002420;1.35e-12;9!UBERON:0007245;1.35e-12;9!UBERON:0010009;1.35e-12;9!UBERON:0010011;1.35e-12;9!UBERON:0000454;1.35e-12;9!UBERON:0001016;4.89e-11;83!UBERON:0004732;1.28e-10;13!UBERON:0000487;1.55e-10;22!UBERON:0009663;7.01e-10;7!UBERON:0001871;9.97e-10;6!UBERON:0002298;1.09e-09;6!UBERON:0004733;3.08e-09;12!UBERON:0002028;3.08e-09;12!UBERON:0006914;8.33e-09;25!UBERON:0000200;3.78e-08;6!UBERON:0001638;6.02e-08;9!UBERON:0003920;6.02e-08;9!UBERON:0004582;6.02e-08;9!UBERON:0000349;1.16e-07;5!UBERON:0001473;1.86e-07;8!UBERON:0004536;1.86e-07;8!UBERON:0006558;1.86e-07;8!UBERON:0002465;2.02e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.03e-73,114;UBERON:0001049,1.33e-41,56;UBERON:0005068,1.33e-41,56;UBERON:0006241,1.33e-41,56;UBERON:0007135,1.33e-41,56;UBERON:0000073,3.34e-38,53;UBERON:0002616,3.34e-38,53;UBERON:0003075,2.46e-31,82;UBERON:0007284,2.46e-31,82;UBERON:0004111,6.10e-31,240;UBERON:0000025,8.21e-31,192;UBERON:0002780,4.24e-30,41;UBERON:0001890,4.24e-30,41;UBERON:0003080,4.24e-30,41;UBERON:0006240,4.24e-30,41;UBERON:0000955,1.70e-29,68;UBERON:0006238,1.70e-29,68;UBERON:0001017,1.87e-29,81;UBERON:0002346,3.87e-29,86;UBERON:0003528,2.06e-27,34;UBERON:0002020,2.06e-27,34;UBERON:0001893,9.63e-27,34;UBERON:0001016,1.43e-26,89;UBERON:0002791,9.37e-25,32;UBERON:0001869,2.27e-24,32;UBERON:0010314,1.10e-22,132;UBERON:0010371,1.90e-22,104;UBERON:0002619,7.55e-20,22;UBERON:0003056,1.04e-19,61;UBERON:0001950,2.11e-17,20;UBERON:0000483,5.91e-17,306;UBERON:0000956,7.55e-17,25;UBERON:0000203,7.55e-17,25;UBERON:0000119,1.51e-16,309;UBERON:0011216,8.33e-14,223;UBERON:0004638,8.95e-14,18;UBERON:0001986,8.95e-14,18;UBERON:0004852,8.95e-14,18;UBERON:0000125,8.82e-13,9;UBERON:0002308,8.82e-13,9;UBERON:0002420,9.61e-13,9;UBERON:0007245,9.61e-13,9;UBERON:0010009,9.61e-13,9;UBERON:0010011,9.61e-13,9;UBERON:0000454,9.61e-13,9;UBERON:0003076,2.20e-12,15;UBERON:0003057,2.20e-12,15;UBERON:0004121,2.17e-11,171;UBERON:0000924,2.17e-11,171;UBERON:0006601,2.17e-11,171;UBERON:0004732,1.47e-10,13;UBERON:0000487,1.56e-10,22;UBERON:0009663,5.65e-10,7;UBERON:0001871,1.01e-09,6;UBERON:0002298,1.23e-09,6;UBERON:0004733,3.49e-09,12;UBERON:0002028,3.49e-09,12;UBERON:0007277,3.49e-09,12;UBERON:0000055,3.75e-09,68;UBERON:0006914,8.37e-09,25;UBERON:0000200,4.53e-08,6;UBERON:0001638,5.72e-08,9;UBERON:0003920,5.72e-08,9;UBERON:0004582,5.72e-08,9;UBERON:0000349,9.14e-08,5;UBERON:0002465,1.79e-07,10;UBERON:0001473,1.92e-07,8;UBERON:0004536,1.92e-07,8;UBERON:0006558,1.92e-07,8;UBERON:0002049,4.73e-07,78;UBERON:0007798,4.73e-07,78;UBERON:0002050,7.94e-07,564 | |||
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| ||
|short_description=p2@CLDN5 | |||
}} | }} |
Latest revision as of 03:20, 19 September 2015
Short description: | p2@CLDN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLDN5_5end |
Coexpression cluster: | C4088_Hepatic_Endothelial_Renal_adipose_Lymphatic_breast_lung |
Association with transcript: | 0bp_to_NM_001130861, NM_003277, uc002zpu.2, uc010grr.2_5end |
EntrezGene: | CLDN5 |
HGNC: | 2047 |
UniProt: | D3DX19O00501 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.39e-23 | 36 |
endothelial cell of vascular tree | 7.01e-22 | 24 |
meso-epithelial cell | 6.27e-17 | 45 |
blood vessel endothelial cell | 8.95e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.95e-14 | 18 |
lining cell | 2.62e-11 | 58 |
barrier cell | 2.62e-11 | 58 |
lymphangioblast | 2.49e-10 | 6 |
endothelial cell of lymphatic vessel | 2.49e-10 | 6 |
vascular lymphangioblast | 2.49e-10 | 6 |
vein endothelial cell | 2.37e-09 | 6 |