FFCP PHASE1:Hg19::chr5:95067004..95067024,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:95067004..95067024,+
|short_description=p5@RHOBTB3
|description=CAGE_peak_5_at_RHOBTB3_5end
|association_with_transcript=125bp_to_ENST00000379982_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22836 | |EntrezGene=22836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18757 | |HGNC=18757 | ||
|TSSclassifier=strong | |||
|UniProt=O94955 | |UniProt=O94955 | ||
|association_with_transcript=125bp_to_ENST00000379982_5end | |||
|cluster_id=chr5:95067004..95067024,+ | |||
|coexpression_cluster_id=C1085 | |||
|description=CAGE_peak_5_at_RHOBTB3_5end | |||
|id=chr5:95067004..95067024,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.14e-18!180;CL:0000680!1.60e-11!57;CL:0000056!1.60e-11!57;CL:0000355!1.60e-11!57;CL:0000187!1.10e-10!54;CL:0000183!1.89e-10!59;CL:0000393!3.68e-09!60;CL:0000211!3.68e-09!60;CL:0000057!5.02e-08!75;CL:0000192!7.90e-08!42;CL:0000514!7.90e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000187;8.58e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.02e-12,58;CL:0000056,2.02e-12,58;CL:0000355,2.02e-12,58;CL:0000187,1.54e-11,55;CL:0000393,8.74e-10,61;CL:0000211,8.74e-10,61;CL:0000192,1.55e-08,43;CL:0000514,1.55e-08,43;CL:0000057,5.51e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.46e-16!365;UBERON:0000481!8.76e-14!347;UBERON:0000073!4.12e-13!94;UBERON:0001016!4.12e-13!94;UBERON:0000119!3.76e-12!312;UBERON:0000914!6.82e-12!83;UBERON:0002329!6.82e-12!83;UBERON:0003077!6.82e-12!83;UBERON:0003059!6.82e-12!83;UBERON:0007282!6.82e-12!83;UBERON:0009618!6.82e-12!83;UBERON:0007285!6.82e-12!83;UBERON:0000483!1.01e-11!309;UBERON:0005743!1.38e-11!86;UBERON:0004290!4.95e-11!70;UBERON:0001134!5.77e-11!61;UBERON:0002036!5.77e-11!61;UBERON:0003082!5.77e-11!61;UBERON:0004121!9.81e-11!169;UBERON:0000924!1.08e-10!173;UBERON:0006601!1.08e-10!173;UBERON:0000955!1.12e-10!69;UBERON:0006238!1.12e-10!69;UBERON:0001017!1.68e-10!82;UBERON:0000033!1.69e-10!123;UBERON:0002385!3.32e-10!63;UBERON:0001015!3.32e-10!63;UBERON:0000383!3.32e-10!63;UBERON:0003075!7.68e-10!86;UBERON:0007284!7.68e-10!86;UBERON:0000477!8.24e-10!286;UBERON:0005256!8.96e-10!143;UBERON:0002616!1.10e-09!59;UBERON:0002346!1.16e-09!90;UBERON:0000153!3.05e-09!129;UBERON:0007811!3.05e-09!129;UBERON:0003056!4.88e-09!61;UBERON:0000468!1.83e-08!659;UBERON:0000486!3.05e-08!82;UBERON:0001049!5.30e-08!57;UBERON:0005068!5.30e-08!57;UBERON:0006241!5.30e-08!57;UBERON:0007135!5.30e-08!57;UBERON:0002780!1.44e-07!41;UBERON:0001890!1.44e-07!41;UBERON:0006240!1.44e-07!41;UBERON:0001893!1.76e-07!34;UBERON:0002791!2.91e-07!33;UBERON:0002020!3.89e-07!34;UBERON:0003528!3.89e-07!34;UBERON:0000025!4.70e-07!194;UBERON:0003080!6.09e-07!42;UBERON:0004111!7.15e-07!241;UBERON:0001869!7.17e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.70e-14,132;UBERON:0001016,5.33e-13,89;UBERON:0000119,1.61e-12,309;UBERON:0007524,2.21e-12,73;UBERON:0004121,4.29e-12,171;UBERON:0000924,4.29e-12,171;UBERON:0006601,4.29e-12,171;UBERON:0000483,4.51e-12,306;UBERON:0000955,5.28e-12,68;UBERON:0006238,5.28e-12,68;UBERON:0003077,7.01e-12,72;UBERON:0007285,7.01e-12,72;UBERON:0001134,1.28e-11,62;UBERON:0002036,1.28e-11,62;UBERON:0003082,1.28e-11,62;UBERON:0002329,1.49e-11,71;UBERON:0003059,1.49e-11,71;UBERON:0007282,1.49e-11,71;UBERON:0004290,1.49e-11,71;UBERON:0009618,1.49e-11,71;UBERON:0001017,2.02e-11,81;UBERON:0003075,5.39e-11,82;UBERON:0007284,5.39e-11,82;UBERON:0002346,1.25e-10,86;UBERON:0002385,1.69e-10,64;UBERON:0001015,1.69e-10,64;UBERON:0000383,1.69e-10,64;UBERON:0003056,1.95e-10,61;UBERON:0007503,3.84e-10,78;UBERON:0005256,1.17e-09,122;UBERON:0003104,5.00e-09,160;UBERON:0009142,5.00e-09,160;UBERON:0000073,7.44e-09,53;UBERON:0002616,7.44e-09,53;UBERON:0001049,7.69e-09,56;UBERON:0005068,7.69e-09,56;UBERON:0006241,7.69e-09,56;UBERON:0007135,7.69e-09,56;UBERON:0011216,1.57e-08,223;UBERON:0000486,2.58e-08,83;UBERON:0002780,4.44e-08,41;UBERON:0001890,4.44e-08,41;UBERON:0003080,4.44e-08,41;UBERON:0006240,4.44e-08,41;UBERON:0001893,7.10e-08,34;UBERON:0010371,9.57e-08,104;UBERON:0003528,1.64e-07,34;UBERON:0002020,1.64e-07,34;UBERON:0002791,2.91e-07,32;UBERON:0001869,3.09e-07,32;UBERON:0000490,3.86e-07,148;UBERON:0000923,4.70e-07,560;UBERON:0010316,4.70e-07,560;UBERON:0005291,4.70e-07,560;UBERON:0006598,4.70e-07,560;UBERON:0010317,4.70e-07,560;UBERON:0002532,4.70e-07,560;UBERON:0000025,4.90e-07,192 | |||
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| ||
|short_description=p5@RHOBTB3 | |||
}} | }} |
Latest revision as of 07:45, 19 September 2015
Short description: | p5@RHOBTB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RHOBTB3_5end |
Coexpression cluster: | C1085_liposarcoma_placenta_Olfactory_amniotic_Hair_mesothelioma_Smooth |
Association with transcript: | 125bp_to_ENST00000379982_5end |
EntrezGene: | RHOBTB3 |
HGNC: | 18757 |
UniProt: | O94955 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.02e-12 | 58 |
myoblast | 2.02e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.02e-12 | 58 |
muscle cell | 1.54e-11 | 55 |
electrically responsive cell | 8.74e-10 | 61 |
electrically active cell | 8.74e-10 | 61 |
smooth muscle cell | 1.55e-08 | 43 |
smooth muscle myoblast | 1.55e-08 | 43 |
fibroblast | 5.51e-08 | 76 |