FFCP PHASE1:Hg19::chr13:111767582..111767618,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8874 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |||
|TSSclassifier=strong | |||
|UniProt=Q14155 | |||
|association_with_transcript=-5bp_to_ENST00000375739,ENST00000375741,NM_001113511,NM_001113512,NM_145735,uc001vrr.2,uc001vrs.2,uc001vrt.2_5end | |||
|cluster_id=chr13:111767582..111767618,+ | |||
|coexpression_cluster_id=C3352 | |||
|description=CAGE_peak_10_at_ARHGEF7_5end | |||
|id=chr13:111767582..111767618,+ | |||
|ontology_enrichment_celltype=CL:0000047!7.00e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.06e-07;2!CL:0000242;1.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.22e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.26e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.40e-42!82;UBERON:0000073!1.48e-41!94;UBERON:0001016!1.48e-41!94;UBERON:0005743!1.89e-41!86;UBERON:0001049!1.95e-37!57;UBERON:0005068!1.95e-37!57;UBERON:0006241!1.95e-37!57;UBERON:0007135!1.95e-37!57;UBERON:0007023!1.13e-36!115;UBERON:0000955!7.11e-32!69;UBERON:0006238!7.11e-32!69;UBERON:0002616!2.29e-30!59;UBERON:0003075!6.40e-30!86;UBERON:0007284!6.40e-30!86;UBERON:0002346!1.11e-27!90;UBERON:0003080!1.41e-27!42;UBERON:0001869!5.81e-27!32;UBERON:0002780!9.65e-27!41;UBERON:0001890!9.65e-27!41;UBERON:0006240!9.65e-27!41;UBERON:0002020!1.03e-26!34;UBERON:0003528!1.03e-26!34;UBERON:0001893!1.78e-26!34;UBERON:0002791!2.25e-25!33;UBERON:0001950!8.76e-23!20;UBERON:0004121!1.33e-22!169;UBERON:0003056!1.44e-22!61;UBERON:0002619!2.47e-22!22;UBERON:0000924!1.74e-21!173;UBERON:0006601!1.74e-21!173;UBERON:0000956!1.55e-20!25;UBERON:0000203!1.55e-20!25;UBERON:0000153!2.90e-20!129;UBERON:0007811!2.90e-20!129;UBERON:0000033!8.78e-20!123;UBERON:0000475!4.74e-13!365;UBERON:0003076!8.19e-11!15;UBERON:0003057!8.19e-11!15;UBERON:0004732!2.45e-09!13;UBERON:0004733!2.72e-08!12;UBERON:0002028!2.72e-08!12;UBERON:0007277!2.72e-08!12;UBERON:0000200!4.33e-08!6;UBERON:0001871!6.09e-08!7;UBERON:0002420!1.11e-07!9;UBERON:0007245!1.11e-07!9;UBERON:0010009!1.11e-07!9;UBERON:0010011!1.11e-07!9;UBERON:0000454!1.11e-07!9;UBERON:0002308!1.32e-07!9;UBERON:0000125!1.32e-07!9;UBERON:0001872!1.38e-07!5;UBERON:0002021!1.79e-07!5;UBERON:0000025!2.33e-07!194;UBERON:0000064!3.91e-07!219;UBERON:0004111!7.54e-07!241;UBERON:0002298!9.45e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.06e-50;20!UBERON:0002619;9.00e-50;22!UBERON:0001869;1.28e-49;32!UBERON:0003528;2.98e-48;34!UBERON:0002020;2.98e-48;34!UBERON:0002791;5.38e-46;32!UBERON:0001893;1.04e-45;34!UBERON:0000956;2.28e-43;25!UBERON:0000203;2.28e-43;25!UBERON:0002780;8.10e-35;41!UBERON:0001890;8.10e-35;41!UBERON:0000073;1.74e-28;53!UBERON:0002616;1.74e-28;53!UBERON:0001017;1.99e-24;75!UBERON:0000955;4.06e-23;68!UBERON:0001016;2.07e-21;83!UBERON:0001872;1.77e-16;5!UBERON:0002021;3.78e-16;5!UBERON:0001871;5.11e-15;6!UBERON:0002420;2.68e-14;9!UBERON:0000125;2.68e-14;9!UBERON:0007245;2.68e-14;9!UBERON:0002308;2.68e-14;9!UBERON:0010009;2.68e-14;9!UBERON:0010011;2.68e-14;9!UBERON:0000454;2.68e-14;9!UBERON:0000200;8.73e-13;6!UBERON:0000369;2.13e-11;4!UBERON:0002435;2.13e-11;4!UBERON:0000204;2.13e-11;4!UBERON:0004732;5.38e-10;13!UBERON:0009663;8.58e-10;7!UBERON:0007023;1.48e-09;114!UBERON:0000349;3.92e-09;5!UBERON:0000988;5.74e-09;3!UBERON:0005383;5.74e-09;3!UBERON:0005382;5.74e-09;3!UBERON:0011216;1.66e-08;132!UBERON:0004733;5.00e-08;12!UBERON:0002028;5.00e-08;12!UBERON:0002680;8.40e-08;9!UBERON:0001895;8.40e-08;9!UBERON:0002298;1.28e-07;6!UBERON:0002771;5.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.41e-61,89;UBERON:0001017,2.61e-59,81;UBERON:0003528,7.05e-57,34;UBERON:0002020,7.05e-57,34;UBERON:0001869,1.45e-56,32;UBERON:0000073,6.71e-56,53;UBERON:0002616,6.71e-56,53;UBERON:0001049,9.92e-56,56;UBERON:0005068,9.92e-56,56;UBERON:0006241,9.92e-56,56;UBERON:0007135,9.92e-56,56;UBERON:0001893,6.62e-53,34;UBERON:0000955,1.53e-52,68;UBERON:0006238,1.53e-52,68;UBERON:0002791,5.33e-52,32;UBERON:0001950,2.87e-50,20;UBERON:0002619,3.94e-50,22;UBERON:0002780,8.68e-50,41;UBERON:0001890,8.68e-50,41;UBERON:0003080,8.68e-50,41;UBERON:0006240,8.68e-50,41;UBERON:0000956,1.10e-43,25;UBERON:0000203,1.10e-43,25;UBERON:0003075,2.62e-42,82;UBERON:0007284,2.62e-42,82;UBERON:0002346,6.82e-40,86;UBERON:0010371,7.57e-38,104;UBERON:0003056,2.89e-36,61;UBERON:0004121,7.09e-33,171;UBERON:0000924,7.09e-33,171;UBERON:0006601,7.09e-33,171;UBERON:0007023,5.73e-26,114;UBERON:0010314,3.92e-24,132;UBERON:0011216,3.72e-22,223;UBERON:0001872,1.68e-16,5;UBERON:0002021,3.22e-16,5;UBERON:0001871,1.72e-15,6;UBERON:0002420,1.51e-14,9;UBERON:0007245,1.51e-14,9;UBERON:0010009,1.51e-14,9;UBERON:0010011,1.51e-14,9;UBERON:0000454,1.51e-14,9;UBERON:0000125,2.28e-14,9;UBERON:0002308,2.28e-14,9;UBERON:0000200,5.91e-13,6;UBERON:0000369,1.66e-11,4;UBERON:0002435,1.66e-11,4;UBERON:0000204,1.66e-11,4;UBERON:0010082,1.66e-11,4;UBERON:0000025,6.79e-11,192;UBERON:0004732,5.03e-10,13;UBERON:0009663,8.29e-10,7;UBERON:0000349,1.96e-09,5;UBERON:0000988,4.45e-09,3;UBERON:0005383,6.28e-09,3;UBERON:0005382,6.28e-09,3;UBERON:0003076,2.30e-08,15;UBERON:0003057,2.30e-08,15;UBERON:0004733,5.12e-08,12;UBERON:0002028,5.12e-08,12;UBERON:0007277,5.12e-08,12;UBERON:0002680,7.41e-08,9;UBERON:0001895,7.41e-08,9;UBERON:0010092,7.41e-08,9;UBERON:0004111,1.19e-07,240;UBERON:0002298,1.31e-07,6;UBERON:0000483,1.74e-07,306;UBERON:0000119,2.55e-07,309;UBERON:0002771,3.55e-07,2;UBERON:0001876,7.76e-07,2 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0,0,0,0,0,0,0.245668634623536,0.413303124703062,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0.213557388818567,0.211931901159562,0,0.309157587715317,0.257640540045629,0,0,0,0,0.184099797284599,0.80823028409406,0,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.518305275076852,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,5.41302168944387,1.84267891867784,3.82763250991898,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0.145016693914229,0.255679882248303,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,1.9882952955326,1.82870241333667,0,0,0.422250816255987,0.398495976502139,0,0,0,0,0.622079175323615,0,0,0,0,0,0,1.93866549219044,2.50473865036998,3.99227596002388,0,0,0.724999575434793,0,0,0,0.344743373241465,0,1.04174996959975,1.77148277162768,1.4471572635049,3.05163472634166,1.54810963903714,0.591095237907095,1.09692698576986,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.337005664903385,0.802577647298789,0.937057782901357,0,0,0,0.789168805698781,0,5.81538247097931,0.442306057399416,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0.441280633457501,0.451961481561065,0,0,3.03891820588218,0,0,0.426905989478705,0,0,0,0.514784993585894,0,0,0,0.271808412147228,0.418411385249333,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0.687481272035051,0,0,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0.295282444544246,0,0,1.22583065500418,0.803765742325096,0.275078873194468,0,0,0,3.09822738955926,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,1.68067843270016,1.3223260174269,0,0,0,0.314408610199332,0,0,0,0,0,2.72008901684737,2.7575888342497,2.75711019087115,4.59021682993726,0,0.886068179966986,3.41673541725497,2.3786276834235,1.14681839138014,0.665574309221114,0.745156835296601,0,0,0,0,0.235265819698172,6.55668868129634,3.91286777249228,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66262682694747,0,0,1.96577348745625,0,0,0,0,0.318004350653419,0.94634094001504,2.40171224485641,1.05802783107205,0,1.92687675289379,2.8339315265117,2.55414174491442,3.48697819209284,5.79764901309952,4.42606415770994,2.09918339321406,2.85538840518309,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,2.76904096935418,3.12431239445539,3.10030194751776,3.86836442182832,7.11067251723685,0,1.48863353516788,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,1.4953341254903,3.8805936402081,0,0,0.156986185701028,1.09980912941201,0,0,0,0,0.142953088353313,1.10609528212909,0,0.695433089210318,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,2.3196288626764,2.91426595835484,1.16969731731053,1.19370465096821,0.118920090777569,0,0,0.452888530700021,0,0,1.88126918544609,0,0,0.588925401344836,0.891139200981258,1.2679671827502,0,0.187967835959707,0,0,0,0,0,0.730336388246517,0,0,0,2.7876510978275,5.23620828408453,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.757786982182394,1.33982065078089,1.65833887891756,1.03432995861895,0.213233981900981,0.952257725854961,0,0.0620747142958579,0,0.12729431655633,0.606351566874658,0.435433495793923,0,0.0673520530145875,0.215166616178029,0.332660356546013,0.162806537221949,0,0,0,2.34640942403454,0.488965776731466,0.406896178315738,0.665756774185513,0.603821380773079,0 | |||
|short_description=p10@ARHGEF7 | |||
}} |
Latest revision as of 13:50, 16 September 2015
Short description: | p10@ARHGEF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARHGEF7_5end |
Coexpression cluster: | C3352_merkel_parietal_occipital_temporal_duodenum_mature_cerebellum |
Association with transcript: | -5bp_to_ENST00000375739, ENST00000375741, NM_001113511, NM_001113512, NM_145735, uc001vrr.2, uc001vrs.2, uc001vrt.2_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | Q14155 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.22e-08 | 2 |