FFCP PHASE1:Hg19::chr14:90872173..90872184,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1442 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-44bp_to_U16850_5end | |||
|cluster_id=chr14:90872173..90872184,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_19_at_CALM1_5end | |||
|id=chr14:90872173..90872184,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.38e-11;82!UBERON:0006215;1.37e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.23e-21!57;UBERON:0005068!2.23e-21!57;UBERON:0006241!2.23e-21!57;UBERON:0007135!2.23e-21!57;UBERON:0002780!8.04e-20!41;UBERON:0001890!8.04e-20!41;UBERON:0006240!8.04e-20!41;UBERON:0001017!1.16e-19!82;UBERON:0003080!8.84e-19!42;UBERON:0002020!1.17e-18!34;UBERON:0003528!1.17e-18!34;UBERON:0001893!1.56e-18!34;UBERON:0000955!2.83e-18!69;UBERON:0006238!2.83e-18!69;UBERON:0005743!6.53e-18!86;UBERON:0002791!6.94e-18!33;UBERON:0001869!1.36e-17!32;UBERON:0002616!2.58e-17!59;UBERON:0000073!5.64e-16!94;UBERON:0001016!5.64e-16!94;UBERON:0007023!1.48e-15!115;UBERON:0002619!2.00e-14!22;UBERON:0000956!1.06e-13!25;UBERON:0000203!1.06e-13!25;UBERON:0001950!4.60e-13!20;UBERON:0003075!1.81e-12!86;UBERON:0007284!1.81e-12!86;UBERON:0002346!3.88e-12!90;UBERON:0003056!2.31e-10!61;UBERON:0000033!6.89e-09!123;UBERON:0004121!7.52e-09!169;UBERON:0000924!8.81e-09!173;UBERON:0006601!8.81e-09!173;UBERON:0000153!4.64e-08!129;UBERON:0007811!4.64e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.87e-49;34!UBERON:0002020;1.87e-49;34!UBERON:0001869;2.81e-48;32!UBERON:0002791;4.88e-48;32!UBERON:0002619;6.65e-46;22!UBERON:0001893;1.02e-45;34!UBERON:0000956;1.70e-43;25!UBERON:0000203;1.70e-43;25!UBERON:0001950;2.46e-41;20!UBERON:0002780;1.40e-40;41!UBERON:0001890;1.40e-40;41!UBERON:0000073;3.72e-34;53!UBERON:0002616;3.72e-34;53!UBERON:0000955;2.44e-25;68!UBERON:0001017;8.62e-22;75!UBERON:0001016;1.67e-18;83!UBERON:0002420;5.24e-16;9!UBERON:0007245;5.24e-16;9!UBERON:0010009;5.24e-16;9!UBERON:0010011;5.24e-16;9!UBERON:0000454;5.24e-16;9!UBERON:0000125;2.27e-15;9!UBERON:0002308;2.27e-15;9!UBERON:0000200;1.50e-14;6!UBERON:0000349;1.44e-12;5!UBERON:0001872;1.71e-12;5!UBERON:0001871;2.39e-12;6!UBERON:0009663;7.43e-12;7!UBERON:0002021;2.15e-11;5!UBERON:0000369;4.31e-10;4!UBERON:0002435;4.31e-10;4!UBERON:0000204;4.31e-10;4!UBERON:0007023;6.59e-10;114!UBERON:0002680;1.41e-08;9!UBERON:0001895;1.41e-08;9!UBERON:0005383;5.85e-08;3!UBERON:0005382;5.85e-08;3!UBERON:0001870;7.31e-08;3!UBERON:0000988;2.55e-07;3!UBERON:0011216;3.44e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.23e-61,53;UBERON:0002616,8.23e-61,53;UBERON:0001049,3.01e-60,56;UBERON:0005068,3.01e-60,56;UBERON:0006241,3.01e-60,56;UBERON:0007135,3.01e-60,56;UBERON:0003528,1.29e-58,34;UBERON:0002020,1.29e-58,34;UBERON:0002780,1.96e-57,41;UBERON:0001890,1.96e-57,41;UBERON:0003080,1.96e-57,41;UBERON:0006240,1.96e-57,41;UBERON:0001869,4.97e-55,32;UBERON:0001893,7.45e-55,34;UBERON:0002791,1.45e-54,32;UBERON:0000955,1.02e-52,68;UBERON:0006238,1.02e-52,68;UBERON:0001017,6.38e-52,81;UBERON:0001016,1.32e-47,89;UBERON:0002619,1.41e-46,22;UBERON:0000956,5.73e-44,25;UBERON:0000203,5.73e-44,25;UBERON:0001950,5.59e-42,20;UBERON:0003075,7.56e-42,82;UBERON:0007284,7.56e-42,82;UBERON:0002346,1.19e-41,86;UBERON:0003056,7.84e-38,61;UBERON:0010371,1.23e-35,104;UBERON:0007023,7.59e-29,114;UBERON:0010314,4.45e-28,132;UBERON:0004121,5.12e-27,171;UBERON:0000924,5.12e-27,171;UBERON:0006601,5.12e-27,171;UBERON:0002420,3.05e-16,9;UBERON:0007245,3.05e-16,9;UBERON:0010009,3.05e-16,9;UBERON:0010011,3.05e-16,9;UBERON:0000454,3.05e-16,9;UBERON:0000125,9.31e-16,9;UBERON:0002308,9.31e-16,9;UBERON:0011216,1.66e-15,223;UBERON:0000200,7.49e-15,6;UBERON:0000025,1.42e-13,192;UBERON:0000349,5.86e-13,5;UBERON:0001871,8.54e-13,6;UBERON:0001872,1.46e-12,5;UBERON:0004111,6.08e-12,240;UBERON:0009663,6.90e-12,7;UBERON:0002021,2.38e-11,5;UBERON:0000369,2.53e-10,4;UBERON:0002435,2.53e-10,4;UBERON:0000204,2.53e-10,4;UBERON:0010082,2.53e-10,4;UBERON:0002680,5.12e-09,9;UBERON:0001895,5.12e-09,9;UBERON:0010092,5.12e-09,9;UBERON:0005383,4.60e-08,3;UBERON:0005382,4.60e-08,3;UBERON:0001870,5.06e-08,3;UBERON:0000483,6.38e-08,306;UBERON:0000988,8.48e-08,3;UBERON:0000119,9.99e-08,309;UBERON:0003076,7.28e-07,15;UBERON:0003057,7.28e-07,15 | |||
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| |||
|short_description=p19@CALM1 | |||
}} |
Latest revision as of 12:19, 16 September 2015
Short description: | p19@CALM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_CALM1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -44bp_to_U16850_5end |
EntrezGene: | CALM1 |
HGNC: | 1442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data